Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2644

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
3,132,208	-		Echvi_2643	0.31	-3.0
3,132,218	-		Echvi_2643	0.32	-1.9
3,132,240	+		Echvi_2643	0.34	-1.9
3,132,241	-		Echvi_2643	0.34	+0.6
3,132,241	-		Echvi_2643	0.34	-0.8
3,132,241	-		Echvi_2643	0.34	-0.6
3,132,243	+		Echvi_2643	0.34	+0.5
3,132,243	+		Echvi_2643	0.34	-0.8
3,132,244	-		Echvi_2643	0.34	+1.1
3,132,249	+		Echvi_2643	0.34	-0.0
3,132,270	+		Echvi_2643	0.36	+0.3
3,132,271	-		Echvi_2643	0.36	-0.1
3,132,279	+		Echvi_2643	0.37	+0.2
3,132,280	-		Echvi_2643	0.37	-0.7
3,132,280	-		Echvi_2643	0.37	-1.2
3,132,351	+		Echvi_2643	0.43	+0.3
3,132,382	+		Echvi_2643	0.46	-1.1
3,132,434	-		Echvi_2643	0.50	+0.4
3,132,438	+		Echvi_2643	0.51	+0.4
3,132,438	+		Echvi_2643	0.51	+0.7
3,132,438	+		Echvi_2643	0.51	-0.3
3,132,438	+		Echvi_2643	0.51	-0.3
3,132,438	+		Echvi_2643	0.51	-0.4
3,132,438	+		Echvi_2643	0.51	-0.0
3,132,439	-		Echvi_2643	0.51	-0.2
3,132,439	-		Echvi_2643	0.51	+1.0
3,132,439	-		Echvi_2643	0.51	+0.5
3,132,446	+		Echvi_2643	0.52	-2.1
3,132,461	+		Echvi_2643	0.53	+0.1
3,132,461	+		Echvi_2643	0.53	-0.2
3,132,461	+		Echvi_2643	0.53	-0.9
3,132,467	-		Echvi_2643	0.53	+0.4
3,132,498	+		Echvi_2643	0.56	-0.2
3,132,499	-		Echvi_2643	0.56	-0.2
3,132,499	-		Echvi_2643	0.56	+0.4
3,132,552	+		Echvi_2643	0.61	-1.7
3,132,552	+		Echvi_2643	0.61	+1.4
3,132,552	+		Echvi_2643	0.61	+0.0
3,132,552	+		Echvi_2643	0.61	+0.1
3,132,553	-		Echvi_2643	0.61	+0.8
3,132,554	+		Echvi_2643	0.61	-0.0
3,132,555	-		Echvi_2643	0.61	-0.6
3,132,564	+		Echvi_2643	0.62	-0.5
3,132,564	+		Echvi_2643	0.62	+0.6
3,132,564	+		Echvi_2643	0.62	-1.3
3,132,565	-		Echvi_2643	0.62	+0.3
3,132,565	-		Echvi_2643	0.62	+0.9
3,132,592	+		Echvi_2643	0.64	+0.0
3,132,630	+		Echvi_2643	0.67	-1.9
3,132,639	+		Echvi_2643	0.68	-0.2
3,132,669	+		Echvi_2643	0.71	+0.5
3,132,677	-		Echvi_2643	0.72	-0.0
3,132,680	-		Echvi_2643	0.72	-1.6
3,132,701	+		Echvi_2643	0.74	-1.4
3,132,702	-		Echvi_2643	0.74	+0.4
3,132,739	-		Echvi_2643	0.77	-0.6
3,132,751	+		Echvi_2643	0.78	-0.3
3,132,752	-		Echvi_2643	0.78	-0.3
3,132,815	-		Echvi_2643	0.83	+0.3
3,132,829	+		Echvi_2643	0.85	+0.8
3,132,830	-		Echvi_2643	0.85	-1.3
3,132,833	-		Echvi_2643	0.85	-0.9
3,132,838	-		Echvi_2643	0.85	+0.7
3,132,838	-		Echvi_2643	0.85	-3.1
3,132,906	+				-0.0
3,132,946	+				-0.5
3,132,973	-				-0.2
3,133,109	+				-0.9
3,133,129	+				-0.4
3,133,130	-				+0.6
3,133,141	+				-1.9
3,133,156	-				+0.0
3,133,169	-				-1.1
3,133,217	-				-0.1
3,133,220	+				-0.9
3,133,256	-		Echvi_2644	0.14	-0.0
3,133,258	-		Echvi_2644	0.15	-0.7
3,133,304	-		Echvi_2644	0.23	-0.3
3,133,472	-		Echvi_2644	0.52	-0.6
3,133,484	-		Echvi_2644	0.54	+0.1
3,133,572	-		Echvi_2644	0.70	-1.2
3,133,572	-		Echvi_2644	0.70	-1.6
3,133,574	+		Echvi_2644	0.70	-0.9
3,133,575	-		Echvi_2644	0.70	-0.8
3,133,575	-		Echvi_2644	0.70	-2.3
3,133,608	+		Echvi_2644	0.76	+0.0
3,133,621	-		Echvi_2644	0.78	+0.1
3,133,628	-		Echvi_2644	0.79	-0.8
3,133,661	+		Echvi_2644	0.85	-0.2
3,133,705	+				-2.1
3,133,708	-				-0.1
3,133,708	-				+0.6
3,133,746	-				+0.3
3,133,816	-				+0.6
3,133,850	-				-0.3
3,134,626	+				-0.3
3,134,627	-				-2.2
3,134,645	+		Echvi_2646	0.13	-1.8
3,134,645	+		Echvi_2646	0.13	-0.8
3,134,663	-		Echvi_2646	0.19	+0.3
3,134,672	+		Echvi_2646	0.21	+0.0
3,134,672	+		Echvi_2646	0.21	+0.9
3,134,672	+		Echvi_2646	0.21	+0.1
3,134,681	+		Echvi_2646	0.24	+0.2
3,134,681	+		Echvi_2646	0.24	-0.6
3,134,682	-		Echvi_2646	0.24	+0.4
3,134,684	+		Echvi_2646	0.25	-1.2
3,134,685	-		Echvi_2646	0.25	+0.2
3,134,685	-		Echvi_2646	0.25	+1.5
3,134,687	+		Echvi_2646	0.26	-0.3
3,134,699	-		Echvi_2646	0.29	+1.0