Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2562

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
3,036,819	-				-0.3
3,036,838	+				-1.4
3,036,843	+				-0.6
3,036,844	-				-1.3
3,036,846	+				-0.7
3,036,846	+				-1.7
3,036,847	-				+0.3
3,036,847	-				-0.6
3,036,855	+				-0.6
3,036,974	-				-1.8
3,037,027	+		Echvi_2560	0.21	-0.1
3,037,028	-		Echvi_2560	0.22	-1.7
3,037,040	+		Echvi_2560	0.25	-3.0
3,037,068	-		Echvi_2560	0.32	-0.1
3,037,068	-		Echvi_2560	0.32	-1.0
3,037,068	-		Echvi_2560	0.32	-1.4
3,037,102	+		Echvi_2560	0.40	-0.7
3,037,137	-		Echvi_2560	0.49	+0.6
3,037,212	+		Echvi_2560	0.68	+2.7
3,037,232	-		Echvi_2560	0.74	-0.4
3,037,249	-		Echvi_2560	0.78	-0.5
3,037,256	+		Echvi_2560	0.80	+0.1
3,037,256	+		Echvi_2560	0.80	-0.3
3,037,256	+		Echvi_2560	0.80	-1.0
3,037,257	-		Echvi_2560	0.80	+0.2
3,037,288	-		Echvi_2560	0.88	-0.5
3,037,309	-				+0.9
3,037,309	-				+1.2
3,037,356	-				-2.7
3,037,398	-		Echvi_2561	0.17	+0.2
3,037,403	-		Echvi_2561	0.18	-2.2
3,037,411	-		Echvi_2561	0.20	+0.7
3,037,430	+		Echvi_2561	0.25	+0.1
3,037,431	-		Echvi_2561	0.25	-1.5
3,037,431	-		Echvi_2561	0.25	+0.7
3,037,482	-		Echvi_2561	0.38	-0.3
3,037,505	-		Echvi_2561	0.44	+0.0
3,037,573	+		Echvi_2561	0.61	-0.3
3,037,581	-		Echvi_2561	0.63	-2.2
3,037,599	-		Echvi_2561	0.68	-0.7
3,037,613	+		Echvi_2561	0.72	-0.5
3,037,614	-		Echvi_2561	0.72	+0.0
3,037,615	+		Echvi_2561	0.72	+0.1
3,037,616	-		Echvi_2561	0.72	-1.8
3,037,616	-		Echvi_2561	0.72	+0.7
3,037,670	+		Echvi_2561	0.86	-0.5
3,037,709	+				-2.0
3,037,710	-				-1.6
3,037,759	-				+0.2
3,037,922	-				+1.0
3,037,923	+				-0.3
3,037,926	+		Echvi_2562	0.10	+1.1
3,037,926	+		Echvi_2562	0.10	-0.8
3,037,967	-		Echvi_2562	0.13	-1.0
3,037,982	+		Echvi_2562	0.14	-0.1
3,037,983	-		Echvi_2562	0.14	-0.3
3,037,985	+		Echvi_2562	0.14	-0.9
3,037,986	-		Echvi_2562	0.14	-1.9
3,038,009	+		Echvi_2562	0.16	+0.1
3,038,127	-		Echvi_2562	0.24	+0.7
3,038,298	+		Echvi_2562	0.36	-0.1
3,038,298	+		Echvi_2562	0.36	+0.1
3,038,330	+		Echvi_2562	0.39	+0.7
3,038,331	-		Echvi_2562	0.39	-0.8
3,038,404	-		Echvi_2562	0.44	+1.3
3,038,583	-		Echvi_2562	0.57	-1.5
3,038,583	-		Echvi_2562	0.57	-0.3
3,038,616	+		Echvi_2562	0.59	+0.1
3,038,690	-		Echvi_2562	0.64	-0.2
3,038,712	-		Echvi_2562	0.66	+0.5
3,038,746	+		Echvi_2562	0.68	-0.4
3,038,746	+		Echvi_2562	0.68	+1.2
3,038,746	+		Echvi_2562	0.68	+0.7
3,038,748	+		Echvi_2562	0.68	-0.4
3,038,748	+		Echvi_2562	0.68	-1.5
3,038,749	-		Echvi_2562	0.68	-2.0
3,038,802	+		Echvi_2562	0.72	-1.5
3,038,924	-		Echvi_2562	0.81	+0.4
3,038,985	-		Echvi_2562	0.85	-0.4
3,039,004	-		Echvi_2562	0.87	-0.3
3,039,125	-				+1.7
3,039,196	-				-0.1
3,039,196	-				+0.7
3,039,217	+				-0.8
3,039,217	+				+1.1
3,039,250	+				+0.7
3,039,258	+				-0.8
3,039,258	+				-1.4
3,039,258	+				-0.4
3,039,259	-				-0.4
3,039,265	-				-1.7
3,039,302	-				-0.1
3,039,306	-				-1.1
3,039,306	-				-1.0
3,039,329	+				-0.4
3,039,329	+				-1.7
3,039,329	+				-0.9
3,039,330	-				+0.2
3,039,332	+				-1.0
3,039,333	-				+1.0
3,039,440	+				-0.0
3,039,440	+				+0.2
3,039,440	+				-2.0
3,039,440	+				+1.3
3,039,441	-				+0.7
3,039,441	-				-0.3
3,039,441	-				-1.6
3,039,441	-				-0.8
3,039,545	+		Echvi_2563	0.18	-0.1
3,039,545	+		Echvi_2563	0.18	+0.1
3,039,545	+		Echvi_2563	0.18	+0.9
3,039,546	-		Echvi_2563	0.18	+1.6
3,039,646	+		Echvi_2563	0.31	-0.1
3,039,672	-		Echvi_2563	0.35	+1.5
3,039,695	+		Echvi_2563	0.38	+0.0
3,039,745	+		Echvi_2563	0.44	+0.4
3,039,796	-		Echvi_2563	0.51	+0.7
3,039,796	-		Echvi_2563	0.51	-1.1
3,039,798	-		Echvi_2563	0.51	-0.5
3,039,879	-		Echvi_2563	0.62	-0.5
3,039,906	+		Echvi_2563	0.65	+0.3
3,039,906	+		Echvi_2563	0.65	-0.6
3,039,947	+		Echvi_2563	0.71	-0.6
3,039,948	-		Echvi_2563	0.71	+0.7
3,039,950	+		Echvi_2563	0.71	-0.1
3,039,951	-		Echvi_2563	0.71	+0.5
3,039,951	-		Echvi_2563	0.71	-0.8
3,039,951	-		Echvi_2563	0.71	-0.6
3,039,954	+		Echvi_2563	0.72	-0.2
3,039,954	+		Echvi_2563	0.72	+0.2
3,039,954	+		Echvi_2563	0.72	-1.9
3,039,955	-		Echvi_2563	0.72	+0.2
3,039,997	+		Echvi_2563	0.77	-0.8
3,039,998	-		Echvi_2563	0.78	-1.4
3,039,998	-		Echvi_2563	0.78	-0.5
3,040,120	+				-1.0
3,040,130	+				-0.3
3,040,131	-				+2.5
3,040,164	-				-0.5