Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2481

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
2,946,440	-				-0.0
2,946,440	-				-0.2
2,946,442	-				-1.6
2,946,444	-				-0.7
2,946,444	-				+0.3
2,946,444	-				+1.1
2,946,449	-				+0.4
2,946,449	-				-0.7
2,946,463	-				-0.2
2,946,481	-				-0.6
2,946,505	-				+2.2
2,946,650	+				+1.0
2,946,670	+				-2.5
2,946,670	+				-1.4
2,946,674	-				+0.7
2,946,696	-				-1.0
2,946,751	+				-1.5
2,946,757	+				+0.7
2,946,842	-				-0.1
2,946,914	+		Echvi_2481	0.11	+1.3
2,946,915	-		Echvi_2481	0.11	-0.3
2,946,915	-		Echvi_2481	0.11	+2.2
2,946,917	+		Echvi_2481	0.11	-1.1
2,946,923	+		Echvi_2481	0.12	+2.3
2,946,924	-		Echvi_2481	0.12	-0.6
2,946,924	-		Echvi_2481	0.12	-0.3
2,946,924	-		Echvi_2481	0.12	-1.4
2,946,924	-		Echvi_2481	0.12	+1.9
2,947,082	+		Echvi_2481	0.24	+1.2
2,947,194	+		Echvi_2481	0.33	-0.5
2,947,194	+		Echvi_2481	0.33	-0.1
2,947,194	+		Echvi_2481	0.33	+0.2
2,947,194	+		Echvi_2481	0.33	+0.3
2,947,194	+		Echvi_2481	0.33	-0.3
2,947,194	+		Echvi_2481	0.33	+0.7
2,947,194	+		Echvi_2481	0.33	-0.9
2,947,195	-		Echvi_2481	0.33	+0.7
2,947,195	-		Echvi_2481	0.33	+0.1
2,947,195	-		Echvi_2481	0.33	+1.1
2,947,197	+		Echvi_2481	0.33	+1.5
2,947,405	-		Echvi_2481	0.50	+0.2
2,947,507	-		Echvi_2481	0.58	+0.2
2,947,522	+		Echvi_2481	0.59	+0.3
2,947,523	-		Echvi_2481	0.59	+1.0
2,947,745	-		Echvi_2481	0.76	+1.7
2,947,751	-		Echvi_2481	0.77	+1.3
2,947,803	+		Echvi_2481	0.81	+2.3
2,947,807	-		Echvi_2481	0.81	-0.7
2,947,825	+		Echvi_2481	0.82	-0.4
2,947,825	+		Echvi_2481	0.82	-0.3
2,947,825	+		Echvi_2481	0.82	-1.7
2,947,825	+		Echvi_2481	0.82	+0.2
2,947,825	+				-0.6
2,947,826	-		Echvi_2481	0.82	+1.6
2,947,826	-		Echvi_2481	0.82	+0.2
2,947,826	-		Echvi_2481	0.82	+1.7
2,947,826	-		Echvi_2481	0.82	-1.8
2,947,826	-		Echvi_2481	0.82	-0.1
2,947,826	-		Echvi_2481	0.82	+0.2
2,947,826	-		Echvi_2481	0.82	-0.4
2,947,826	-		Echvi_2481	0.82	-0.3
2,947,826	-		Echvi_2481	0.82	+0.7
2,948,012	+				-0.3
2,948,012	+				-1.8
2,948,012	+				+0.0
2,948,012	+				+1.0
2,948,013	-				+0.2
2,948,016	+				-0.5
2,948,016	+				-0.2
2,948,017	-				+0.8
2,948,017	-				-1.6
2,948,070	-				-0.4
2,948,074	+				-0.1
2,948,113	+				+1.2
2,948,119	+				+0.7
2,948,119	+				-0.2
2,948,150	+				-0.9
2,948,151	-				-0.4
2,948,151	-				+1.5
2,948,151	-				-1.7
2,948,151	-				+1.7
2,948,164	+				+0.2
2,948,165	-				+0.3
2,948,168	+				-0.1
2,948,169	-				-1.2
2,948,172	+				-0.5
2,948,172	+				-1.3
2,948,173	-				-0.3
2,948,173	-				-1.7
2,948,173	-				+0.8
2,948,179	-				-0.8
2,948,179	-				+0.7
2,948,179	-				+0.3
2,948,195	-				-0.8
2,948,306	+		Echvi_2482	0.15	-0.3
2,948,342	+		Echvi_2482	0.23	-1.3
2,948,342	+		Echvi_2482	0.23	-0.8
2,948,343	-		Echvi_2482	0.23	+0.8
2,948,358	+		Echvi_2482	0.26	+1.0
2,948,387	-		Echvi_2482	0.33	+0.1
2,948,411	+		Echvi_2482	0.38	+1.7
2,948,411	+		Echvi_2482	0.38	+0.1
2,948,412	-		Echvi_2482	0.38	+0.3
2,948,415	-		Echvi_2482	0.39	+0.4
2,948,415	-		Echvi_2482	0.39	-1.0
2,948,500	+		Echvi_2482	0.57	-0.2
2,948,501	-		Echvi_2482	0.58	-0.4
2,948,507	-		Echvi_2482	0.59	+0.2
2,948,561	-		Echvi_2482	0.71	+0.6
2,948,581	+		Echvi_2482	0.75	-0.8
2,948,581	+		Echvi_2482	0.75	-0.5
2,948,606	-		Echvi_2482	0.80	+1.2
2,948,900	-				-0.8
2,948,910	+				+0.5
2,948,911	-				-1.3
2,948,989	+		Echvi_2483	0.11	-0.6
2,948,990	-		Echvi_2483	0.11	-0.8
2,949,025	+		Echvi_2483	0.16	+0.7
2,949,047	+		Echvi_2483	0.18	-0.0
2,949,047	+		Echvi_2483	0.18	+0.2
2,949,047	+		Echvi_2483	0.18	-0.3
2,949,047	+		Echvi_2483	0.18	-0.3
2,949,048	-		Echvi_2483	0.18	-0.0
2,949,048	-		Echvi_2483	0.18	-1.0
2,949,049	+		Echvi_2483	0.18	-1.2
2,949,049	+		Echvi_2483	0.18	-2.2
2,949,049	+		Echvi_2483	0.18	+0.3
2,949,049	+		Echvi_2483	0.18	+2.6
2,949,049	+		Echvi_2483	0.18	-1.1
2,949,049	+		Echvi_2483	0.18	+0.7
2,949,049	+		Echvi_2483	0.18	+0.2