Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2008

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
2,358,631	-				+0.2
2,358,631	-				+0.5
2,358,631	-				-0.3
2,358,631	-				+0.4
2,358,632	+				-0.1
2,358,632	+				+1.0
2,358,633	-				+1.4
2,358,633	-				+1.6
2,358,677	+				-1.1
2,358,718	+				+2.8
2,358,724	-				+0.0
2,358,727	+				-0.3
2,358,727	+				-0.1
2,358,728	-				-0.4
2,358,728	-				+2.6
2,358,728	-				-0.2
2,358,764	+		Echvi_2007	0.13	-0.9
2,358,764	+		Echvi_2007	0.13	+2.1
2,358,830	+		Echvi_2007	0.19	-1.3
2,358,830	+		Echvi_2007	0.19	+0.9
2,358,831	-		Echvi_2007	0.20	-0.8
2,358,831	-		Echvi_2007	0.20	-0.6
2,358,842	+		Echvi_2007	0.21	-0.5
2,358,843	-		Echvi_2007	0.21	+1.3
2,358,843	-		Echvi_2007	0.21	+0.3
2,358,873	+		Echvi_2007	0.24	-0.5
2,358,905	-		Echvi_2007	0.27	+0.4
2,358,910	+		Echvi_2007	0.28	-0.5
2,358,910	+		Echvi_2007	0.28	+0.3
2,358,911	-		Echvi_2007	0.28	+0.7
2,358,916	+		Echvi_2007	0.28	-1.9
2,358,917	-		Echvi_2007	0.28	+1.0
2,358,917	-		Echvi_2007	0.28	+0.0
2,358,917	-		Echvi_2007	0.28	-0.1
2,358,918	+		Echvi_2007	0.28	-0.6
2,358,919	-		Echvi_2007	0.29	+0.4
2,358,970	-		Echvi_2007	0.34	-0.1
2,358,987	+		Echvi_2007	0.35	-0.8
2,358,987	+		Echvi_2007	0.35	-0.2
2,359,080	+		Echvi_2007	0.45	+0.3
2,359,081	-		Echvi_2007	0.45	+0.7
2,359,081	-		Echvi_2007	0.45	+0.0
2,359,083	+		Echvi_2007	0.45	-1.5
2,359,084	-		Echvi_2007	0.45	+1.8
2,359,101	+		Echvi_2007	0.47	-0.8
2,359,102	-		Echvi_2007	0.47	+0.4
2,359,102	-		Echvi_2007	0.47	-0.4
2,359,102	-		Echvi_2007	0.47	-2.3
2,359,102	-		Echvi_2007	0.47	+1.0
2,359,102	-		Echvi_2007	0.47	+0.0
2,359,102	-		Echvi_2007	0.47	+0.9
2,359,208	+		Echvi_2007	0.58	-0.1
2,359,230	+		Echvi_2007	0.60	+0.6
2,359,230	+		Echvi_2007	0.60	+2.4
2,359,230	+		Echvi_2007	0.60	-0.2
2,359,231	-		Echvi_2007	0.60	-1.1
2,359,250	-		Echvi_2007	0.62	-1.2
2,359,250	-		Echvi_2007	0.62	-1.0
2,359,289	+		Echvi_2007	0.66	+0.6
2,359,373	-		Echvi_2007	0.75	+0.2
2,359,511	-		Echvi_2007	0.89	+0.2
2,359,511	-		Echvi_2007	0.89	+0.5
2,359,529	+				-0.3
2,359,529	+				+0.3
2,359,530	-				-1.4
2,359,530	-				+0.5
2,359,530	-				-0.3
2,359,553	+				-1.6
2,359,554	-				-0.1
2,359,595	+				-0.3
2,359,595	+				-1.6
2,359,596	-				+0.4
2,359,618	-				-2.5
2,359,618	-				-0.3
2,359,625	+				-0.5
2,359,696	+				-1.0
2,359,701	+				+0.8
2,359,701	+				-0.4
2,359,754	+				+0.1
2,359,754	+				-0.4
2,359,755	-				+0.6
2,359,755	-				-0.1
2,359,798	-		Echvi_2008	0.13	-0.9
2,359,828	+		Echvi_2008	0.15	-0.6
2,359,870	+		Echvi_2008	0.19	+0.1
2,359,871	-		Echvi_2008	0.19	-0.0
2,359,871	-		Echvi_2008	0.19	+0.4
2,359,871	-		Echvi_2008	0.19	-1.0
2,359,871	-		Echvi_2008	0.19	-0.2
2,359,871	-		Echvi_2008	0.19	+0.6
2,359,872	+		Echvi_2008	0.19	+0.7
2,359,872	+		Echvi_2008	0.19	+0.4
2,359,873	-		Echvi_2008	0.19	+0.0
2,359,873	-		Echvi_2008	0.19	+0.1
2,360,057	+		Echvi_2008	0.33	-0.5
2,360,057	+		Echvi_2008	0.33	-1.1
2,360,058	-		Echvi_2008	0.33	+0.5
2,360,058	-				+1.8
2,360,081	+		Echvi_2008	0.35	-0.6
2,360,131	+		Echvi_2008	0.39	-0.7
2,360,189	+		Echvi_2008	0.43	-1.2
2,360,189	+		Echvi_2008	0.43	+0.3
2,360,200	+		Echvi_2008	0.44	-1.6
2,360,200	+		Echvi_2008	0.44	+3.0
2,360,204	-		Echvi_2008	0.45	-0.8
2,360,284	-		Echvi_2008	0.51	+0.0
2,360,347	+		Echvi_2008	0.56	-0.9
2,360,403	-		Echvi_2008	0.60	-1.6
2,360,403	-		Echvi_2008	0.60	+0.6
2,360,435	-		Echvi_2008	0.63	-1.5
2,360,454	+		Echvi_2008	0.64	-0.5
2,360,454	+		Echvi_2008	0.64	-0.5
2,360,457	-		Echvi_2008	0.64	-2.3
2,360,457	-		Echvi_2008	0.64	+0.8
2,360,457	-		Echvi_2008	0.64	-1.5
2,360,457	-		Echvi_2008	0.64	+0.1
2,360,457	-		Echvi_2008	0.64	+0.3
2,360,478	-		Echvi_2008	0.66	+0.2
2,360,482	+		Echvi_2008	0.66	+0.7
2,360,482	+		Echvi_2008	0.66	-0.9
2,360,483	-		Echvi_2008	0.66	-0.9
2,360,498	+		Echvi_2008	0.67	+0.4
2,360,498	+		Echvi_2008	0.67	-0.8
2,360,498	+		Echvi_2008	0.67	-0.6
2,360,499	-		Echvi_2008	0.68	+0.4
2,360,499	-		Echvi_2008	0.68	-0.4
2,360,499	-		Echvi_2008	0.68	-2.6
2,360,503	-		Echvi_2008	0.68	+1.8
2,360,525	+		Echvi_2008	0.70	-0.8
2,360,525	+		Echvi_2008	0.70	+0.1
2,360,525	+		Echvi_2008	0.70	-0.7
2,360,525	+		Echvi_2008	0.70	+1.8
2,360,526	-		Echvi_2008	0.70	-1.4
2,360,526	-		Echvi_2008	0.70	+1.0
2,360,530	-		Echvi_2008	0.70	-1.8
2,360,538	-		Echvi_2008	0.71	-1.1
2,360,542	+		Echvi_2008	0.71	-1.2
2,360,543	-		Echvi_2008	0.71	+0.1
2,360,567	+		Echvi_2008	0.73	-0.0
2,360,568	-		Echvi_2008	0.73	-0.0
2,360,602	-		Echvi_2008	0.76	+0.2
2,360,640	-		Echvi_2008	0.78	-0.0
2,360,656	+		Echvi_2008	0.80	+0.8
2,360,687	-		Echvi_2008	0.82	+0.6
2,360,701	+		Echvi_2008	0.83	-1.7
2,360,718	+		Echvi_2008	0.85	-1.3
2,360,719	-		Echvi_2008	0.85	-0.8
2,360,810	+				+0.8
2,360,818	+				+0.6
2,360,819	-				+0.2
2,360,834	-				-0.2
2,360,944	-				+1.1
2,360,950	-				-0.6
2,360,950	-				+0.1
2,360,967	+				+1.8
2,360,968	-				-0.1
2,360,970	+				+0.3
2,360,970	+				+2.1
2,360,970	+				-0.6
2,360,970	+				+0.5
2,361,004	-				-0.5
2,361,018	-				-3.0
2,361,019	+				-0.7
2,361,020	-				+0.2
2,361,038	-				+3.6
2,361,042	-				-0.7
2,361,122	-				-0.2
2,361,170	+				-1.0
2,361,170	+				-0.2
2,361,171	-				+2.0
2,361,171	-				-1.6
2,361,171	-				-1.0
2,361,224	+		Echvi_2009	0.10	-0.5
2,361,226	+		Echvi_2009	0.10	+0.8
2,361,226	+		Echvi_2009	0.10	-2.1
2,361,226	+		Echvi_2009	0.10	+0.9
2,361,226	+		Echvi_2009	0.10	-0.7
2,361,226	+		Echvi_2009	0.10	-2.5
2,361,227	-		Echvi_2009	0.11	+0.3
2,361,227	-		Echvi_2009	0.11	-0.4
2,361,227	-		Echvi_2009	0.11	-0.4
2,361,235	+		Echvi_2009	0.11	+0.6
2,361,236	-		Echvi_2009	0.11	-1.5
2,361,236	-		Echvi_2009	0.11	-0.4
2,361,545	-		Echvi_2009	0.30	+0.8
2,361,547	+		Echvi_2009	0.30	-0.6
2,361,548	-		Echvi_2009	0.30	-0.0
2,361,548	-		Echvi_2009	0.30	-0.8
2,361,548	-		Echvi_2009	0.30	+0.4
2,361,548	-		Echvi_2009	0.30	-0.3
2,361,548	-		Echvi_2009	0.30	+1.8
2,361,601	+		Echvi_2009	0.33	-0.2
2,361,602	-		Echvi_2009	0.33	-1.5
2,361,602	-		Echvi_2009	0.33	+0.0
2,361,602	-		Echvi_2009	0.33	+0.0
2,361,602	-		Echvi_2009	0.33	+0.5
2,361,604	+		Echvi_2009	0.34	-0.3
2,361,739	+		Echvi_2009	0.42	-1.7
2,361,739	+		Echvi_2009	0.42	-0.3
2,361,739	+		Echvi_2009	0.42	-0.6
2,361,740	-		Echvi_2009	0.42	-0.7
2,361,740	-		Echvi_2009	0.42	-1.4
2,361,740	-		Echvi_2009	0.42	+1.2
2,361,740	-		Echvi_2009	0.42	-0.7
2,361,743	+		Echvi_2009	0.42	-0.3
2,361,743	+		Echvi_2009	0.42	+1.1
2,361,743	+		Echvi_2009	0.42	-0.8
2,361,744	-		Echvi_2009	0.42	+0.4
2,361,833	+		Echvi_2009	0.47	-1.8
2,361,834	-		Echvi_2009	0.48	+0.6