Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1920

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
2,258,040	+		Echvi_1919	0.86	+0.3
2,258,063	+		Echvi_1919	0.87	-1.2
2,258,063	+		Echvi_1919	0.87	+0.7
2,258,064	-		Echvi_1919	0.87	-0.1
2,258,089	+		Echvi_1919	0.87	+0.6
2,258,183	+		Echvi_1919	0.89	-1.9
2,258,184	-		Echvi_1919	0.89	+0.7
2,258,184	-		Echvi_1919	0.89	+0.0
2,258,184	-		Echvi_1919	0.89	+0.3
2,258,184	-		Echvi_1919	0.89	+0.2
2,258,184	-		Echvi_1919	0.89	-0.7
2,258,184	-		Echvi_1919	0.89	+1.1
2,258,185	+		Echvi_1919	0.89	-0.2
2,258,222	-		Echvi_1919	0.90	+0.0
2,258,263	+				-0.1
2,258,352	-				+0.3
2,258,437	-				-0.5
2,258,500	+				+0.2
2,258,500	+				-0.2
2,258,500	+				+0.3
2,258,501	-				+0.9
2,258,504	+				-0.1
2,258,505	-				+0.6
2,258,531	+				+1.3
2,258,552	+				-1.5
2,258,634	+				-1.6
2,258,757	-				-1.5
2,258,833	+				-0.2
2,258,969	+				-1.6
2,258,969	+				+0.7
2,258,969	+				-0.7
2,258,970	-				+2.4
2,258,970	-				-1.8
2,258,992	+				-0.4
2,258,997	+				+0.7
2,259,029	+				+0.1
2,259,109	+				-0.3
2,259,113	-				+0.0
2,259,135	-				-0.0
2,259,188	+				-0.0
2,259,209	+				+0.1
2,259,210	-				-0.2
2,259,248	-		Echvi_1920	0.11	+0.6
2,259,435	+		Echvi_1920	0.20	-0.6
2,259,436	-		Echvi_1920	0.20	+0.3
2,259,436	-		Echvi_1920	0.20	-0.7
2,259,678	+		Echvi_1920	0.31	+0.5
2,259,679	-		Echvi_1920	0.31	-0.7
2,259,710	+		Echvi_1920	0.33	+0.6
2,259,736	+		Echvi_1920	0.34	-0.2
2,259,783	+		Echvi_1920	0.36	-0.2
2,259,790	-		Echvi_1920	0.36	-1.7
2,259,791	+		Echvi_1920	0.36	-0.2
2,259,809	-		Echvi_1920	0.37	+0.4
2,259,809	-		Echvi_1920	0.37	-0.8
2,259,811	-		Echvi_1920	0.37	+2.4
2,259,811	-		Echvi_1920	0.37	-0.8
2,259,811	-		Echvi_1920	0.37	-0.7
2,259,886	-		Echvi_1920	0.41	+0.4
2,259,961	+		Echvi_1920	0.44	-0.6
2,260,001	-		Echvi_1920	0.46	+0.8
2,260,005	-		Echvi_1920	0.46	+0.4
2,260,050	-		Echvi_1920	0.48	-0.5
2,260,054	-		Echvi_1920	0.49	-1.6
2,260,054	-		Echvi_1920	0.49	+0.0
2,260,054	-		Echvi_1920	0.49	-0.7
2,260,054	-		Echvi_1920	0.49	-1.0
2,260,054	-		Echvi_1920	0.49	-0.2
2,260,054	-		Echvi_1920	0.49	+0.8
2,260,085	+		Echvi_1920	0.50	+0.4
2,260,227	+		Echvi_1920	0.57	-0.1
2,260,262	+		Echvi_1920	0.58	+0.2
2,260,263	-		Echvi_1920	0.58	+0.8
2,260,263	-		Echvi_1920	0.58	-0.4
2,260,263	-		Echvi_1920	0.58	-1.1
2,260,263	-		Echvi_1920	0.58	-0.3
2,260,266	+		Echvi_1920	0.58	-1.7
2,260,298	-		Echvi_1920	0.60	-1.0
2,260,345	+		Echvi_1920	0.62	+0.1
2,260,387	-		Echvi_1920	0.64	-1.5
2,260,499	+		Echvi_1920	0.69	-2.2
2,260,500	-		Echvi_1920	0.69	-1.0
2,260,500	-		Echvi_1920	0.69	+1.8
2,260,510	+		Echvi_1920	0.70	+0.3
2,260,510	+		Echvi_1920	0.70	-1.0
2,260,511	-		Echvi_1920	0.70	-1.0
2,260,511	-		Echvi_1920	0.70	+0.2
2,260,594	-		Echvi_1920	0.74	+0.4
2,260,681	-		Echvi_1920	0.78	-1.0
2,260,700	+		Echvi_1920	0.79	-0.2
2,260,734	+		Echvi_1920	0.80	-2.3
2,261,267	+				+1.4
2,261,268	-				-0.3
2,261,268	-				-0.5
2,261,286	+				-0.6
2,261,286	+				+0.3
2,261,288	+				-0.2
2,261,289	-				-0.6
2,261,289	-				+0.8
2,261,301	-				+0.6
2,261,306	-				+0.3
2,261,350	+				+1.3
2,261,350	+				-2.3
2,261,350	+				-1.1
2,261,350	+				+1.8
2,261,351	-				+2.4
2,261,351	-				-1.4
2,261,351	-				+0.6
2,261,352	+				-0.7
2,261,352	+				+0.6
2,261,352	+				-0.7
2,261,353	-				-0.3
2,261,475	-		Echvi_1921	0.15	+0.7
2,261,483	-		Echvi_1921	0.15	-0.6
2,261,548	+		Echvi_1921	0.21	-0.5
2,261,548	+		Echvi_1921	0.21	+0.3
2,261,548	+		Echvi_1921	0.21	-0.2
2,261,549	-		Echvi_1921	0.21	+0.3
2,261,594	+		Echvi_1921	0.25	+0.3
2,261,615	+		Echvi_1921	0.27	-0.6
2,261,615	+		Echvi_1921	0.27	+0.8
2,261,616	-		Echvi_1921	0.27	+0.2
2,261,655	+		Echvi_1921	0.31	-1.2
2,262,028	+		Echvi_1921	0.64	-1.5
2,262,029	-		Echvi_1921	0.64	-0.6
2,262,151	+		Echvi_1921	0.75	+0.1
2,262,151	+		Echvi_1921	0.75	+1.8
2,262,151	+		Echvi_1921	0.75	-0.2
2,262,152	-		Echvi_1921	0.75	-0.3