Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1857

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
2,170,826	+		Echvi_1856	0.41	+0.3
2,170,854	-		Echvi_1856	0.43	+0.3
2,170,854	-		Echvi_1856	0.43	-0.1
2,170,883	-		Echvi_1856	0.45	+0.8
2,170,933	+		Echvi_1856	0.49	+1.5
2,171,016	-		Echvi_1856	0.55	-0.3
2,171,132	+		Echvi_1856	0.64	-0.6
2,171,133	-		Echvi_1856	0.64	-2.6
2,171,133	-		Echvi_1856	0.64	-1.6
2,171,158	+		Echvi_1856	0.66	-0.8
2,171,159	-		Echvi_1856	0.66	+0.0
2,171,207	+		Echvi_1856	0.69	+0.4
2,171,208	-		Echvi_1856	0.69	-0.4
2,171,224	+		Echvi_1856	0.70	+0.4
2,171,224	+		Echvi_1856	0.70	-0.3
2,171,297	+		Echvi_1856	0.76	-1.3
2,171,396	+		Echvi_1856	0.83	-0.3
2,171,407	+		Echvi_1856	0.84	+0.3
2,171,437	+		Echvi_1856	0.86	+0.7
2,171,438	-		Echvi_1856	0.86	+1.2
2,171,444	-		Echvi_1856	0.87	-0.7
2,171,469	+		Echvi_1856	0.88	-0.2
2,171,532	+				+0.1
2,171,533	-				-0.2
2,171,533	-				+3.9
2,171,572	+				-1.6
2,171,573	-				+1.9
2,171,573	-				+0.0
2,171,573	-				-0.7
2,171,575	-				-1.1
2,171,575	-				-0.4
2,171,575	-				+2.4
2,171,684	+				+1.2
2,171,731	-				-1.5
2,171,779	+				+0.1
2,171,841	+		Echvi_1857	0.10	+0.4
2,171,841	+		Echvi_1857	0.10	-0.7
2,171,841	+		Echvi_1857	0.10	+0.2
2,171,841	+		Echvi_1857	0.10	+0.0
2,171,841	+		Echvi_1857	0.10	-1.0
2,171,841	+		Echvi_1857	0.10	-0.7
2,171,842	-		Echvi_1857	0.10	+0.1
2,171,842	-		Echvi_1857	0.10	-0.1
2,171,842	-		Echvi_1857	0.10	+1.6
2,171,842	-		Echvi_1857	0.10	+1.2
2,171,842	-		Echvi_1857	0.10	-0.3
2,171,976	+		Echvi_1857	0.19	-1.4
2,171,977	-		Echvi_1857	0.19	+1.6
2,171,977	-		Echvi_1857	0.19	+0.1
2,172,003	-		Echvi_1857	0.21	-0.1
2,172,003	-		Echvi_1857	0.21	-0.3
2,172,026	+		Echvi_1857	0.23	-0.5
2,172,110	+		Echvi_1857	0.28	-0.9
2,172,126	-		Echvi_1857	0.29	-0.5
2,172,160	+		Echvi_1857	0.32	-1.5
2,172,290	+		Echvi_1857	0.40	-1.3
2,172,291	-		Echvi_1857	0.40	+0.1
2,172,291	-		Echvi_1857	0.40	-1.6
2,172,316	+		Echvi_1857	0.42	+0.0
2,172,340	+		Echvi_1857	0.44	-3.7
2,172,340	+		Echvi_1857	0.44	+0.4
2,172,341	-		Echvi_1857	0.44	-0.6
2,172,452	+		Echvi_1857	0.51	-0.3
2,172,536	+		Echvi_1857	0.57	-0.3
2,172,537	-		Echvi_1857	0.57	-0.1
2,172,537	-		Echvi_1857	0.57	-1.0
2,172,539	-		Echvi_1857	0.57	-0.1
2,172,550	+		Echvi_1857	0.58	-0.0
2,172,551	-				+4.2
2,172,551	-		Echvi_1857	0.58	-0.9
2,172,574	-		Echvi_1857	0.59	-0.6
2,172,646	+		Echvi_1857	0.64	+1.2
2,172,646	+		Echvi_1857	0.64	+0.6
2,172,689	+		Echvi_1857	0.67	-0.1
2,172,689	+		Echvi_1857	0.67	+1.4
2,172,689	+		Echvi_1857	0.67	+0.4
2,172,689	+		Echvi_1857	0.67	-1.8
2,172,690	-		Echvi_1857	0.67	+0.9
2,172,690	-		Echvi_1857	0.67	+0.7
2,172,690	-		Echvi_1857	0.67	-1.2
2,172,690	-		Echvi_1857	0.67	+1.0
2,172,690	-		Echvi_1857	0.67	-1.9
2,172,690	-		Echvi_1857	0.67	-1.6
2,172,690	-		Echvi_1857	0.67	-1.2
2,172,703	-		Echvi_1857	0.68	-0.1
2,172,703	-		Echvi_1857	0.68	-0.1
2,172,764	+		Echvi_1857	0.72	+0.3
2,172,773	-		Echvi_1857	0.73	-0.4
2,172,792	+		Echvi_1857	0.74	+0.2
2,172,793	-		Echvi_1857	0.74	-0.7
2,172,806	-		Echvi_1857	0.75	+0.1
2,172,847	+		Echvi_1857	0.78	-0.9
2,172,847	+		Echvi_1857	0.78	+0.2
2,172,848	-		Echvi_1857	0.78	+0.1
2,172,863	-		Echvi_1857	0.79	-0.9
2,172,934	+		Echvi_1857	0.84	-1.3
2,172,935	-		Echvi_1857	0.84	+0.1
2,172,935	-		Echvi_1857	0.84	-1.0
2,172,977	+		Echvi_1857	0.87	-0.1
2,173,046	-				-0.1
2,173,052	+				-1.0
2,173,097	+				-0.1
2,173,097	+				-0.6
2,173,108	+				-0.4
2,173,108	+				-0.9
2,173,190	-				+1.6
2,173,190	-				-1.1
2,173,190	-				+0.1
2,173,201	-				-0.5
2,173,254	+				-0.1
2,173,254	+				+0.1
2,173,254	+				+0.1
2,173,254	+				-0.7
2,173,254	+				+1.3
2,173,255	-				+0.3
2,173,255	-				-1.1
2,173,259	+				+1.9
2,173,259	+				+0.7
2,173,259	+				-1.1
2,173,261	+				+0.7
2,173,261	+				-1.5
2,173,327	+				-0.7
2,173,327	+				+1.1
2,173,328	-				-1.7
2,173,372	+				-0.1
2,173,372	+				+0.3
2,173,373	-				+1.3
2,173,373	-				-0.1
2,173,391	+				-0.6
2,173,400	+				+1.5
2,173,424	+				-1.3
2,173,424	+				+0.7
2,173,424	+				+0.5
2,173,424	+				+0.5
2,173,425	-				+1.2
2,173,425	-				+0.3
2,173,425	-				-0.4
2,173,425	-				+0.4
2,173,425	-				-0.3
2,173,425	-				+0.5
2,173,456	+				-0.4
2,173,474	+				-0.8
2,173,518	+				+3.4
2,173,519	-				+1.9
2,173,532	-				-0.2
2,173,657	-		Echvi_1858	0.14	+0.0
2,173,670	+		Echvi_1858	0.14	-0.3
2,173,671	-		Echvi_1858	0.14	-0.9
2,173,699	+		Echvi_1858	0.15	+1.5
2,173,715	+		Echvi_1858	0.15	+0.3
2,173,749	+		Echvi_1858	0.17	-0.4
2,173,834	+		Echvi_1858	0.19	+0.9
2,173,834	+		Echvi_1858	0.19	+0.1
2,173,835	-		Echvi_1858	0.19	-0.2
2,173,885	+		Echvi_1858	0.21	-0.7
2,174,058	-		Echvi_1858	0.27	-1.0
2,174,058	-		Echvi_1858	0.27	-0.5
2,174,058	-		Echvi_1858	0.27	+0.3
2,174,100	+		Echvi_1858	0.28	-1.0
2,174,100	+		Echvi_1858	0.28	-0.6
2,174,100	+		Echvi_1858	0.28	-2.2
2,174,135	-		Echvi_1858	0.29	+0.7