Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1658

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
1,926,367	+		Echvi_1657	0.64	-0.2
1,926,367	+		Echvi_1657	0.64	+1.7
1,926,367	+		Echvi_1657	0.64	-0.2
1,926,430	+		Echvi_1657	0.68	+0.3
1,926,430	+		Echvi_1657	0.68	-0.6
1,926,431	-		Echvi_1657	0.68	-0.4
1,926,454	+		Echvi_1657	0.69	+1.7
1,926,454	+		Echvi_1657	0.69	+1.4
1,926,455	-		Echvi_1657	0.69	-1.2
1,926,490	-		Echvi_1657	0.71	+1.2
1,926,490	-		Echvi_1657	0.71	-0.4
1,926,490	-		Echvi_1657	0.71	-1.0
1,926,490	-		Echvi_1657	0.71	+1.0
1,926,550	-		Echvi_1657	0.74	+0.6
1,926,620	+		Echvi_1657	0.78	+0.1
1,926,859	+				-0.3
1,926,876	-				-1.0
1,926,900	+				+0.7
1,926,900	+				+0.6
1,926,901	-				-0.8
1,926,901	-				+0.3
1,926,901	-				+0.7
1,926,902	+				+1.5
1,926,902	+				-0.1
1,926,903	-				-0.1
1,926,903	-				-1.0
1,926,932	+				+0.9
1,926,933	-				-0.1
1,926,933	-				+1.0
1,926,958	-				-0.1
1,926,988	+				+0.6
1,927,029	-				-2.6
1,927,042	+				-1.1
1,927,043	-				+1.9
1,927,049	+				+0.1
1,927,049	+				-0.8
1,927,052	+				-0.5
1,927,067	+				-0.7
1,927,068	-				+0.2
1,927,068	-				+1.5
1,927,068	-				-0.2
1,927,071	+				+0.5
1,927,094	-				+0.2
1,927,100	-				-0.4
1,927,100	-				+1.0
1,927,100	-				-1.7
1,927,120	-				-1.4
1,927,197	+				-1.1
1,927,336	+				-0.8
1,927,347	-				-1.1
1,927,479	+				+0.1
1,927,480	-				+0.5
1,927,665	-		Echvi_1658	0.24	-1.9
1,927,665	-		Echvi_1658	0.24	+0.8
1,927,665	-		Echvi_1658	0.24	-0.7
1,927,720	-		Echvi_1658	0.28	-0.9
1,927,764	+		Echvi_1658	0.32	-0.4
1,927,764	+		Echvi_1658	0.32	+0.1
1,927,810	+		Echvi_1658	0.35	+1.1
1,927,848	-		Echvi_1658	0.38	-1.8
1,927,928	+		Echvi_1658	0.44	-0.5
1,927,928	+		Echvi_1658	0.44	-0.6
1,927,995	-		Echvi_1658	0.49	-2.3
1,927,995	-		Echvi_1658	0.49	+0.5
1,928,092	-		Echvi_1658	0.57	-0.2
1,928,108	+		Echvi_1658	0.58	-0.2
1,928,153	-		Echvi_1658	0.62	-0.7
1,928,158	+		Echvi_1658	0.62	-0.4
1,928,158	+		Echvi_1658	0.62	-1.5
1,928,188	+		Echvi_1658	0.64	+0.1
1,928,188	+		Echvi_1658	0.64	+0.9
1,928,188	+		Echvi_1658	0.64	-0.4
1,928,189	-		Echvi_1658	0.64	+0.7
1,928,189	-		Echvi_1658	0.64	+0.7
1,928,227	+		Echvi_1658	0.67	-0.9
1,928,227	+		Echvi_1658	0.67	-0.2
1,928,227	+		Echvi_1658	0.67	+3.2
1,928,227	+		Echvi_1658	0.67	-0.9
1,928,227	+		Echvi_1658	0.67	-0.1
1,928,227	+		Echvi_1658	0.67	-1.9
1,928,227	+		Echvi_1658	0.67	-1.3
1,928,227	+		Echvi_1658	0.67	-0.1
1,928,227	+		Echvi_1658	0.67	-0.3
1,928,227	+		Echvi_1658	0.67	+1.1
1,928,227	+		Echvi_1658	0.67	-0.8
1,928,228	-		Echvi_1658	0.67	+0.9
1,928,228	-		Echvi_1658	0.67	+0.0
1,928,228	-		Echvi_1658	0.67	+0.2
1,928,228	-		Echvi_1658	0.67	+0.1
1,928,228	-		Echvi_1658	0.67	-0.3
1,928,228	-		Echvi_1658	0.67	-0.5
1,928,228	-		Echvi_1658	0.67	-1.4
1,928,228	-		Echvi_1658	0.67	-0.2
1,928,228	-		Echvi_1658	0.67	-0.6
1,928,228	-		Echvi_1658	0.67	+0.3
1,928,228	-		Echvi_1658	0.67	+1.2
1,928,228	-		Echvi_1658	0.67	-0.8
1,928,233	+		Echvi_1658	0.68	-1.0
1,928,235	+		Echvi_1658	0.68	+1.9
1,928,253	-		Echvi_1658	0.69	+0.2
1,928,328	-		Echvi_1658	0.75	-0.4
1,928,328	-		Echvi_1658	0.75	+0.3
1,928,328	-		Echvi_1658	0.75	-0.6
1,928,328	-		Echvi_1658	0.75	-0.5
1,928,351	+		Echvi_1658	0.77	-0.3
1,928,352	-		Echvi_1658	0.77	-0.1
1,928,378	-		Echvi_1658	0.79	-2.2
1,928,426	+		Echvi_1658	0.83	-1.0
1,928,428	+		Echvi_1658	0.83	+0.7
1,928,429	-		Echvi_1658	0.83	+0.6
1,928,429	-		Echvi_1658	0.83	+0.7
1,928,429	-		Echvi_1658	0.83	+0.1
1,928,439	+		Echvi_1658	0.84	-1.3
1,928,589	+				+0.6
1,928,659	-				-1.6
1,928,710	+				-0.9
1,928,710	+				+0.1
1,928,711	-				+0.2
1,928,711	-				+1.7
1,928,713	-				-1.1
1,928,713	-				+1.6
1,928,713	-				+0.8
1,928,725	-				-2.2
1,928,734	-				-0.6
1,928,816	-		Echvi_1659	0.14	-1.0
1,928,908	-		Echvi_1659	0.27	-0.3
1,928,981	-		Echvi_1659	0.37	-0.3
1,928,993	+		Echvi_1659	0.39	+0.3
1,929,116	+		Echvi_1659	0.56	+1.7
1,929,117	-		Echvi_1659	0.56	-0.7
1,929,117	-		Echvi_1659	0.56	+0.8
1,929,117	-		Echvi_1659	0.56	-1.6
1,929,134	+		Echvi_1659	0.59	+0.9
1,929,134	+		Echvi_1659	0.59	-0.7
1,929,135	-		Echvi_1659	0.59	+0.2
1,929,135	-		Echvi_1659	0.59	+0.9
1,929,135	-		Echvi_1659	0.59	-0.3
1,929,137	+		Echvi_1659	0.59	+1.6
1,929,137	+		Echvi_1659	0.59	-0.4
1,929,137	+		Echvi_1659	0.59	-0.3
1,929,137	+		Echvi_1659	0.59	-1.0
1,929,137	+		Echvi_1659	0.59	-0.7
1,929,137	+		Echvi_1659	0.59	+0.1
1,929,137	+				+0.3
1,929,137	+		Echvi_1659	0.59	-0.4
1,929,138	-		Echvi_1659	0.59	+0.4
1,929,138	-		Echvi_1659	0.59	-0.1
1,929,138	-		Echvi_1659	0.59	+0.1
1,929,138	-		Echvi_1659	0.59	+0.0
1,929,159	-		Echvi_1659	0.62	-0.6
1,929,159	-		Echvi_1659	0.62	+0.6
1,929,159	-		Echvi_1659	0.62	+0.7
1,929,186	-		Echvi_1659	0.66	+0.2
1,929,201	+		Echvi_1659	0.68	-0.2
1,929,201	+		Echvi_1659	0.68	+1.3
1,929,260	+		Echvi_1659	0.76	-0.6
1,929,260	+		Echvi_1659	0.76	+0.8
1,929,261	-		Echvi_1659	0.76	-1.1
1,929,261	-		Echvi_1659	0.76	-0.2
1,929,261	-		Echvi_1659	0.76	+0.1
1,929,268	+		Echvi_1659	0.77	+0.9
1,929,329	+		Echvi_1659	0.86	+0.7
1,929,329	+		Echvi_1659	0.86	-0.6
1,929,359	+				-1.8
1,929,416	-				-0.9
1,929,416	-				+0.1
1,929,416	-				-0.2
1,929,427	-				-0.3
1,929,427	-				+1.4
1,929,470	+		Echvi_1660	0.48	+0.3
1,929,470	+		Echvi_1660	0.48	-0.3
1,929,514	+				-2.1
1,929,614	+				-0.8