Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1556

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
1,784,304	-		Echvi_1554	0.89	-0.8
1,784,304	-		Echvi_1554	0.89	+1.3
1,784,309	-				-0.9
1,784,313	+				-0.5
1,784,313	+				+1.5
1,784,314	-				+0.1
1,784,382	-				-0.7
1,784,382	-				-2.5
1,784,382	-				-0.8
1,784,382	-				-0.7
1,784,395	-				-0.9
1,784,395	-				+1.4
1,784,401	-				-0.6
1,784,401	-				+0.7
1,784,401	-				+1.1
1,784,487	+				-1.3
1,784,535	-				-1.2
1,784,581	+				+1.2
1,784,619	+				+0.6
1,784,619	+				-0.7
1,784,619	+				-2.7
1,784,620	-				-0.9
1,784,623	-				+0.3
1,784,724	+		Echvi_1555	0.29	-1.7
1,784,724	+		Echvi_1555	0.29	-0.4
1,784,735	+		Echvi_1555	0.31	-1.5
1,784,735	+		Echvi_1555	0.31	+0.2
1,784,778	+		Echvi_1555	0.40	+0.7
1,784,900	-		Echvi_1555	0.65	+1.3
1,784,916	+		Echvi_1555	0.68	-0.4
1,784,925	+		Echvi_1555	0.70	-0.1
1,784,951	-		Echvi_1555	0.75	+0.6
1,784,966	+		Echvi_1555	0.78	-0.2
1,784,966	+		Echvi_1555	0.78	-0.1
1,784,967	-		Echvi_1555	0.78	-0.9
1,784,967	-		Echvi_1555	0.78	+0.0
1,784,967	-		Echvi_1555	0.78	-1.1
1,784,967	-		Echvi_1555	0.78	-0.3
1,784,967	-		Echvi_1555	0.78	+1.1
1,784,967	-		Echvi_1555	0.78	-0.5
1,784,968	+		Echvi_1555	0.78	-2.1
1,784,968	+		Echvi_1555	0.78	-1.1
1,784,973	+		Echvi_1555	0.79	+0.3
1,784,973	+		Echvi_1555	0.79	-0.5
1,785,027	+				-0.3
1,785,058	-				-0.5
1,785,072	-				+1.6
1,785,072	-				+1.0
1,785,115	+				-2.6
1,785,116	-				+1.3
1,785,174	+				-1.6
1,785,174	+				-0.7
1,785,179	+				-0.0
1,785,202	-				-1.6
1,785,245	+				+1.9
1,785,260	-		Echvi_1556	0.12	-0.7
1,785,475	+		Echvi_1556	0.44	-1.7
1,785,475	+		Echvi_1556	0.44	+0.3
1,785,476	-		Echvi_1556	0.45	+0.0
1,785,476	-		Echvi_1556	0.45	-2.5
1,785,477	+		Echvi_1556	0.45	-0.9
1,785,478	-		Echvi_1556	0.45	-0.3
1,785,483	-		Echvi_1556	0.46	+0.2
1,785,545	+		Echvi_1556	0.55	+0.0
1,785,558	-		Echvi_1556	0.57	-0.3
1,785,595	+		Echvi_1556	0.63	-1.0
1,785,595	+		Echvi_1556	0.63	-1.6
1,785,595	+		Echvi_1556	0.63	-0.8
1,785,595	+		Echvi_1556	0.63	-1.7
1,785,596	-		Echvi_1556	0.63	+0.9
1,785,596	-		Echvi_1556	0.63	-1.2
1,785,596	-		Echvi_1556	0.63	-1.4
1,785,740	+		Echvi_1556	0.84	+0.9
1,785,741	-		Echvi_1556	0.85	-0.1
1,785,877	-				-1.8
1,785,898	+				+0.9
1,785,907	+				-1.7
1,785,908	-				-0.0
1,785,908	-				-0.5
1,785,925	+				-1.9
1,785,946	-				-1.4
1,785,949	+				+1.0
1,785,949	+				-1.2
1,785,950	-				-0.7
1,785,950	-				+0.4
1,785,950	-				-0.2
1,785,962	-				+0.3
1,785,962	-				-1.1
1,785,988	-				+0.4
1,785,996	-				+1.2
1,786,006	-				+2.0
1,786,009	-				+0.1
1,786,012	+				-1.6
1,786,018	+				-0.0
1,786,019	-				+0.1
1,786,019	-				-0.1
1,786,023	-				+0.9
1,786,026	+				+0.3
1,786,027	-				+1.7
1,786,027	-				-0.4
1,786,247	+		Echvi_1557	0.22	+0.7
1,786,247	+		Echvi_1557	0.22	+1.0
1,786,279	+		Echvi_1557	0.25	-0.3
1,786,279	+		Echvi_1557	0.25	-1.6
1,786,279	+		Echvi_1557	0.25	-2.6
1,786,279	+		Echvi_1557	0.25	-0.8
1,786,279	+		Echvi_1557	0.25	-0.4
1,786,279	+		Echvi_1557	0.25	-0.5
1,786,280	-		Echvi_1557	0.25	+0.3
1,786,280	-		Echvi_1557	0.25	-0.9
1,786,320	+		Echvi_1557	0.29	-1.5
1,786,321	-		Echvi_1557	0.29	-0.1
1,786,321	-		Echvi_1557	0.29	-0.1
1,786,478	+		Echvi_1557	0.45	-0.1
1,786,527	+		Echvi_1557	0.51	+0.3
1,786,597	-		Echvi_1557	0.58	-0.3
1,786,699	+		Echvi_1557	0.68	+3.5
1,786,700	-		Echvi_1557	0.68	-0.3
1,786,742	-		Echvi_1557	0.73	-0.5
1,786,765	+		Echvi_1557	0.75	-1.1
1,786,765	+		Echvi_1557	0.75	-0.0