Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1439

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
1,650,670	+				+1.3
1,650,670	+				-0.5
1,650,671	-				+2.2
1,650,685	-				+0.4
1,650,694	+				-0.4
1,650,724	-				-1.2
1,650,737	-				+0.9
1,650,834	+				-0.1
1,650,834	+				+0.4
1,650,857	+				+0.2
1,650,858	-				-0.1
1,650,858	-				-0.1
1,650,878	+				+1.9
1,650,920	+				-0.5
1,650,920	+				-2.1
1,650,921	-				+1.5
1,650,921	-				-0.8
1,650,921	-				+0.5
1,650,921	-				-1.9
1,650,921	-				+2.2
1,650,921	-				+0.1
1,650,921	-				-1.4
1,650,923	-				+0.4
1,651,035	+				+1.7
1,651,111	+		Echvi_1438	0.11	-0.4
1,651,275	-		Echvi_1438	0.40	-1.3
1,651,275	-		Echvi_1438	0.40	+0.3
1,651,300	-		Echvi_1438	0.45	-0.2
1,651,341	+		Echvi_1438	0.52	-0.7
1,651,342	-		Echvi_1438	0.52	+0.7
1,651,342	-		Echvi_1438	0.52	-0.3
1,651,342	-		Echvi_1438	0.52	+0.6
1,651,399	+		Echvi_1438	0.63	-0.5
1,651,399	+		Echvi_1438	0.63	+1.5
1,651,400	-		Echvi_1438	0.63	-1.1
1,651,422	+		Echvi_1438	0.67	+0.5
1,651,423	-		Echvi_1438	0.67	+1.1
1,651,441	+		Echvi_1438	0.70	-0.7
1,651,465	-		Echvi_1438	0.75	-0.1
1,651,502	+		Echvi_1438	0.81	+1.2
1,651,503	-		Echvi_1438	0.82	-0.1
1,651,503	-		Echvi_1438	0.82	-0.7
1,651,503	-		Echvi_1438	0.82	-0.3
1,651,607	+				-0.4
1,651,608	-				-0.6
1,651,660	-				+0.1
1,651,810	+		Echvi_1439	0.11	-0.6
1,651,926	+		Echvi_1439	0.18	-1.5
1,651,926	+		Echvi_1439	0.18	-0.5
1,651,926	+		Echvi_1439	0.18	+0.7
1,651,926	+		Echvi_1439	0.18	-0.6
1,651,927	-		Echvi_1439	0.18	+0.1
1,651,927	-		Echvi_1439	0.18	-0.2
1,651,928	+		Echvi_1439	0.18	+0.5
1,651,928	+		Echvi_1439	0.18	+0.4
1,651,928	+		Echvi_1439	0.18	+1.9
1,651,936	+		Echvi_1439	0.18	-1.7
1,651,937	-		Echvi_1439	0.18	-0.7
1,652,019	-		Echvi_1439	0.23	-0.7
1,652,074	-		Echvi_1439	0.27	-0.3
1,652,075	+		Echvi_1439	0.27	-1.2
1,652,076	-		Echvi_1439	0.27	-0.8
1,652,076	-		Echvi_1439	0.27	+0.4
1,652,094	+		Echvi_1439	0.28	+0.7
1,652,100	+		Echvi_1439	0.28	-0.5
1,652,100	+		Echvi_1439	0.28	+1.3
1,652,100	+		Echvi_1439	0.28	-1.1
1,652,101	-		Echvi_1439	0.28	-0.6
1,652,218	+		Echvi_1439	0.35	+1.1
1,652,246	+		Echvi_1439	0.37	+0.2
1,652,247	-		Echvi_1439	0.37	-0.7
1,652,247	-		Echvi_1439	0.37	-0.7
1,652,344	-		Echvi_1439	0.42	-0.4
1,652,344	-		Echvi_1439	0.42	-0.1
1,652,348	+		Echvi_1439	0.43	+0.7
1,652,348	+		Echvi_1439	0.43	+0.1
1,652,355	-		Echvi_1439	0.43	-2.3
1,652,403	-		Echvi_1439	0.46	+1.6
1,652,433	+		Echvi_1439	0.48	-0.5
1,652,494	-		Echvi_1439	0.51	-0.3
1,652,502	+		Echvi_1439	0.52	+0.3
1,652,503	-		Echvi_1439	0.52	-1.9
1,652,503	-		Echvi_1439	0.52	-0.5
1,652,604	-		Echvi_1439	0.58	+1.2
1,652,641	-		Echvi_1439	0.60	+1.1
1,652,641	-		Echvi_1439	0.60	+2.5
1,652,685	+				+1.3
1,652,686	-		Echvi_1439	0.62	-1.2
1,652,686	-		Echvi_1439	0.62	+0.1
1,652,692	-		Echvi_1439	0.63	-0.4
1,652,715	+		Echvi_1439	0.64	+0.5
1,652,715	+		Echvi_1439	0.64	-1.1
1,652,719	+		Echvi_1439	0.64	-0.5
1,652,735	+		Echvi_1439	0.65	+0.3
1,652,763	+		Echvi_1439	0.67	-1.2
1,652,764	-		Echvi_1439	0.67	-0.7
1,652,767	+		Echvi_1439	0.67	-0.7
1,652,916	+		Echvi_1439	0.76	+0.9
1,652,916	+		Echvi_1439	0.76	-0.6
1,652,916	+		Echvi_1439	0.76	-2.9
1,652,916	+		Echvi_1439	0.76	-0.4
1,652,917	-		Echvi_1439	0.76	-0.9
1,652,929	+		Echvi_1439	0.77	-1.1
1,652,929	+		Echvi_1439	0.77	-1.1
1,652,945	+		Echvi_1439	0.78	-0.2
1,652,946	-		Echvi_1439	0.78	-1.7
1,652,946	-		Echvi_1439	0.78	+0.3
1,652,946	-		Echvi_1439	0.78	-1.8
1,652,950	+		Echvi_1439	0.78	+1.1
1,652,951	-		Echvi_1439	0.78	-0.4
1,652,951	-		Echvi_1439	0.78	+0.1
1,652,951	-		Echvi_1439	0.78	-2.0
1,652,959	-		Echvi_1439	0.79	-0.3
1,653,018	-		Echvi_1439	0.82	-0.2
1,653,018	-		Echvi_1439	0.82	-0.9
1,653,050	-		Echvi_1439	0.84	+1.9
1,653,050	-		Echvi_1439	0.84	+0.6
1,653,081	+		Echvi_1439	0.86	-0.5
1,653,087	-		Echvi_1439	0.86	-1.5
1,653,173	+				-2.1
1,653,174	-				+1.2
1,653,201	+				-0.6
1,653,201	+				+0.8
1,653,201	+				-0.0
1,653,201	+				-0.4
1,653,201	+				-0.7
1,653,202	-				+0.3
1,653,202	-				-0.2
1,653,202	-				-0.2
1,653,221	+				-0.4
1,653,255	-				-0.1
1,653,255	-				+1.3
1,653,259	-				+0.7
1,653,259	-				-2.3
1,653,259	-				-1.2
1,653,259	-				-0.4
1,653,259	-				-0.5
1,653,260	+				-0.5
1,653,347	+				-0.6
1,653,360	+				-0.5
1,653,361	-				+0.3
1,653,361	-				+1.1
1,653,362	+				+1.0
1,653,362	+				-0.9
1,653,362	+				-0.5
1,653,362	+				+1.3
1,653,363	-				-0.5
1,653,375	+				+0.1
1,653,393	+				+0.1
1,653,393	+				-1.6
1,653,394	-				-0.4
1,653,439	-				-0.5
1,653,503	+		Echvi_1440	0.15	-0.3
1,653,503	+		Echvi_1440	0.15	-1.0
1,653,504	-		Echvi_1440	0.15	+0.3
1,653,504	-		Echvi_1440	0.15	-0.2
1,653,510	-		Echvi_1440	0.16	+0.4
1,653,543	+		Echvi_1440	0.19	-1.2
1,653,575	+		Echvi_1440	0.22	+0.9
1,653,575	+		Echvi_1440	0.22	-0.1
1,653,575	+		Echvi_1440	0.22	+0.3
1,653,575	+		Echvi_1440	0.22	+1.1
1,653,576	-		Echvi_1440	0.22	+0.1
1,653,576	-		Echvi_1440	0.22	+1.2
1,653,576	-		Echvi_1440	0.22	-0.6
1,653,580	-		Echvi_1440	0.23	-1.1
1,653,617	-		Echvi_1440	0.26	-1.3
1,653,651	+		Echvi_1440	0.30	-1.9
1,653,651	+		Echvi_1440	0.30	-0.4
1,653,651	+		Echvi_1440	0.30	-1.2
1,653,652	-		Echvi_1440	0.30	-0.7
1,653,652	-		Echvi_1440	0.30	-0.1
1,653,662	+		Echvi_1440	0.31	+2.9
1,653,662	+		Echvi_1440	0.31	-0.1
1,653,663	-		Echvi_1440	0.31	-0.3
1,653,675	+		Echvi_1440	0.32	+2.4
1,653,693	+		Echvi_1440	0.34	+1.3
1,653,694	-		Echvi_1440	0.34	-0.3
1,653,741	-		Echvi_1440	0.39	+0.6
1,653,741	-		Echvi_1440	0.39	+2.5
1,653,741	-		Echvi_1440	0.39	-0.5
1,653,846	-		Echvi_1440	0.49	-0.5
1,653,846	-		Echvi_1440	0.49	-0.5
1,653,873	+		Echvi_1440	0.52	-0.5
1,653,905	+		Echvi_1440	0.55	-2.3
1,653,905	+		Echvi_1440	0.55	+0.1
1,653,906	-		Echvi_1440	0.55	-0.9
1,653,916	-		Echvi_1440	0.56	+0.1
1,653,956	+		Echvi_1440	0.60	-0.2
1,653,956	+		Echvi_1440	0.60	+1.1
1,653,965	-		Echvi_1440	0.61	+0.3
1,653,966	+		Echvi_1440	0.61	+0.0
1,653,966	+		Echvi_1440	0.61	-1.2
1,653,966	+		Echvi_1440	0.61	-1.6
1,653,966	+		Echvi_1440	0.61	-0.5
1,653,967	-		Echvi_1440	0.61	+0.4
1,653,998	-		Echvi_1440	0.64	-0.2
1,653,998	-		Echvi_1440	0.64	-0.4
1,653,998	-		Echvi_1440	0.64	-0.1
1,654,050	+		Echvi_1440	0.70	-0.9
1,654,051	-		Echvi_1440	0.70	-0.8
1,654,051	-		Echvi_1440	0.70	+0.1
1,654,143	+		Echvi_1440	0.79	-1.1
1,654,144	-		Echvi_1440	0.79	+0.4
1,654,144	-		Echvi_1440	0.79	-0.2
1,654,144	-		Echvi_1440	0.79	+0.1
1,654,169	-		Echvi_1440	0.81	-0.1
1,654,229	+		Echvi_1440	0.87	+0.2
1,654,230	-		Echvi_1440	0.88	+3.3
1,654,230	-		Echvi_1440	0.88	-2.5
1,654,230	-		Echvi_1440	0.88	-0.0
1,654,232	-		Echvi_1440	0.88	+0.6
1,654,248	+		Echvi_1440	0.89	-0.8
1,654,248	+		Echvi_1440	0.89	+1.2
1,654,249	-		Echvi_1440	0.89	+1.0
1,654,309	+				-1.3
1,654,319	-				-0.4
1,654,319	-				-0.3