Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1400

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
1,613,779	+		Echvi_1399	0.43	-0.4
1,613,780	-		Echvi_1399	0.43	-0.7
1,613,780	-		Echvi_1399	0.43	-0.2
1,613,868	+		Echvi_1399	0.49	+0.8
1,613,868	+		Echvi_1399	0.49	-2.7
1,613,880	+		Echvi_1399	0.50	-1.7
1,613,881	-		Echvi_1399	0.50	+1.0
1,613,881	-		Echvi_1399	0.50	-0.2
1,613,892	-		Echvi_1399	0.51	+1.0
1,613,924	+		Echvi_1399	0.53	-0.2
1,613,925	-		Echvi_1399	0.53	+1.1
1,613,942	+		Echvi_1399	0.54	+1.6
1,613,943	-		Echvi_1399	0.54	-1.2
1,613,956	+		Echvi_1399	0.55	-0.2
1,613,956	+		Echvi_1399	0.55	+0.2
1,613,957	-		Echvi_1399	0.55	-0.4
1,613,957	-		Echvi_1399	0.55	-0.7
1,613,957	-		Echvi_1399	0.55	+0.5
1,614,078	+		Echvi_1399	0.63	-0.7
1,614,079	-		Echvi_1399	0.63	+0.0
1,614,079	-		Echvi_1399	0.63	+0.3
1,614,079	-		Echvi_1399	0.63	-0.5
1,614,084	-		Echvi_1399	0.63	-1.2
1,614,084	-		Echvi_1399	0.63	-0.5
1,614,084	-		Echvi_1399	0.63	-0.0
1,614,086	+		Echvi_1399	0.63	+0.1
1,614,153	+		Echvi_1399	0.68	+1.3
1,614,172	+		Echvi_1399	0.69	-0.2
1,614,177	-		Echvi_1399	0.70	-0.1
1,614,200	+		Echvi_1399	0.71	-1.3
1,614,213	-		Echvi_1399	0.72	-0.9
1,614,230	+		Echvi_1399	0.73	+0.1
1,614,252	+		Echvi_1399	0.75	-1.7
1,614,256	+		Echvi_1399	0.75	+0.3
1,614,256	+		Echvi_1399	0.75	+0.1
1,614,364	+		Echvi_1399	0.82	+2.3
1,614,364	+		Echvi_1399	0.82	+0.9
1,614,364	+		Echvi_1399	0.82	-0.8
1,614,364	+		Echvi_1399	0.82	+0.9
1,614,364	+		Echvi_1399	0.82	+0.5
1,614,364	+		Echvi_1399	0.82	+1.5
1,614,364	+		Echvi_1399	0.82	-0.5
1,614,369	+		Echvi_1399	0.82	-1.1
1,614,369	+		Echvi_1399	0.82	+0.6
1,614,369	+		Echvi_1399	0.82	+0.2
1,614,369	+		Echvi_1399	0.82	-0.7
1,614,369	+		Echvi_1399	0.82	+0.3
1,614,369	+		Echvi_1399	0.82	+1.1
1,614,370	-		Echvi_1399	0.82	+0.2
1,614,370	-		Echvi_1399	0.82	-1.4
1,614,370	-		Echvi_1399	0.82	-1.1
1,614,403	-		Echvi_1399	0.85	+0.3
1,614,503	-				-1.7
1,614,539	-				-0.3
1,614,614	-				+0.8
1,614,614	-				-0.8
1,614,615	+				-0.2
1,614,616	-				+0.5
1,614,638	+				-0.1
1,614,638	+				+0.3
1,614,638	+				+0.3
1,614,638	+				+1.6
1,614,638	+				-1.3
1,614,639	-				+0.1
1,614,659	+				+1.0
1,614,659	+				+0.9
1,614,670	+				-1.8
1,614,703	+				+0.6
1,614,703	+				-0.1
1,614,760	+				-0.9
1,614,782	+				-0.1
1,614,782	+				-0.5
1,614,782	+				+0.9
1,614,813	+				+1.1
1,615,024	+		Echvi_1400	0.62	+0.0
1,615,058	+		Echvi_1400	0.71	-1.0
1,615,058	+		Echvi_1400	0.71	-1.2
1,615,060	+		Echvi_1400	0.71	-2.9
1,615,075	+		Echvi_1400	0.75	-1.9
1,615,106	+		Echvi_1400	0.83	-1.0
1,615,131	+		Echvi_1400	0.89	-0.7
1,615,131	+		Echvi_1400	0.89	+0.2
1,615,168	+				+0.3
1,615,206	+				+0.5
1,615,210	+				+0.1
1,615,226	+				+1.0
1,615,228	+				-2.0
1,615,228	+				+0.1
1,615,228	+				-0.1
1,615,252	+				+0.5
1,615,254	+				-0.3
1,615,254	+				+0.4
1,615,326	+				-0.5
1,615,389	+		Echvi_1401	0.11	-0.0
1,615,389	+		Echvi_1401	0.11	-0.8
1,615,389	+		Echvi_1401	0.11	-0.4
1,615,398	+		Echvi_1401	0.12	-1.5
1,615,398	+		Echvi_1401	0.12	-0.4
1,615,453	+		Echvi_1401	0.17	-0.8
1,615,453	+		Echvi_1401	0.17	-0.9
1,615,456	+		Echvi_1401	0.17	-1.7
1,615,457	-		Echvi_1401	0.17	-1.5
1,615,457	-		Echvi_1401	0.17	+0.0
1,615,457	-		Echvi_1401	0.17	-2.5
1,615,476	+		Echvi_1401	0.19	+1.4
1,615,476	+		Echvi_1401	0.19	+0.5
1,615,610	+		Echvi_1401	0.30	+0.1
1,615,610	+		Echvi_1401	0.30	+0.3
1,615,610	+		Echvi_1401	0.30	+0.9
1,615,644	+		Echvi_1401	0.33	-1.7
1,615,656	+		Echvi_1401	0.34	+1.5
1,615,742	+		Echvi_1401	0.41	-0.7
1,615,746	+		Echvi_1401	0.41	+0.1
1,615,747	-		Echvi_1401	0.42	-0.5
1,615,772	+		Echvi_1401	0.44	+0.6
1,615,773	-		Echvi_1401	0.44	-1.4
1,615,821	-		Echvi_1401	0.48	-0.8
1,615,835	+		Echvi_1401	0.49	-1.4
1,615,835	+		Echvi_1401	0.49	-0.9
1,615,845	+		Echvi_1401	0.50	-0.5
1,615,869	-		Echvi_1401	0.52	+0.3
1,615,869	-		Echvi_1401	0.52	+0.2
1,615,889	-		Echvi_1401	0.54	+0.6
1,615,983	+		Echvi_1401	0.61	+2.1
1,615,983	+		Echvi_1401	0.61	-1.8
1,616,010	+		Echvi_1401	0.64	+1.0
1,616,050	-		Echvi_1401	0.67	-1.9