Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1128

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
1,288,918	-		Echvi_1126	0.70	+0.4
1,288,972	+		Echvi_1126	0.75	+0.4
1,288,973	-		Echvi_1126	0.75	+0.5
1,288,973	-		Echvi_1126	0.75	+0.6
1,288,973	-		Echvi_1126	0.75	-0.5
1,289,035	+		Echvi_1126	0.81	-0.7
1,289,118	+		Echvi_1126	0.89	-1.1
1,289,139	+				+0.1
1,289,139	+				-0.7
1,289,146	+				+0.0
1,289,147	-				-0.1
1,289,147	-				+0.9
1,289,147	-				-0.1
1,289,149	+				+1.0
1,289,150	-				+0.2
1,289,170	+				-1.7
1,289,171	-				-0.3
1,289,212	+				-0.2
1,289,212	+				+1.2
1,289,212	+				-0.3
1,289,212	+				+1.6
1,289,213	-				+0.7
1,289,213	-				+0.5
1,289,213	-				-1.1
1,289,213	-				+1.6
1,289,221	-				+0.4
1,289,237	+				-1.3
1,289,237	+				+0.1
1,289,237	+				+0.6
1,289,237	+				-0.5
1,289,237	+				-2.3
1,289,238	-				+1.7
1,289,303	+				-1.4
1,289,303	+				+0.6
1,289,304	-				+0.3
1,289,371	+		Echvi_1127	0.20	-0.1
1,289,371	+		Echvi_1127	0.20	+0.7
1,289,439	+		Echvi_1127	0.33	-0.1
1,289,439	+		Echvi_1127	0.33	+0.6
1,289,440	-		Echvi_1127	0.33	+0.8
1,289,465	-		Echvi_1127	0.38	-1.1
1,289,527	+		Echvi_1127	0.49	+0.3
1,289,527	+		Echvi_1127	0.49	+1.3
1,289,527	+		Echvi_1127	0.49	-1.4
1,289,527	+		Echvi_1127	0.49	-0.4
1,289,528	-		Echvi_1127	0.50	+0.1
1,289,670	-		Echvi_1127	0.76	-0.4
1,289,670	-		Echvi_1127	0.76	-0.6
1,289,672	-		Echvi_1127	0.76	+0.5
1,289,760	+				+0.3
1,289,790	+				-0.5
1,289,790	+				-1.4
1,289,790	+				+0.9
1,289,791	-				+0.1
1,289,811	+				-1.2
1,289,811	+				+0.2
1,289,811	+				-0.1
1,289,811	+				+0.3
1,289,812	-				+0.8
1,289,841	-				-0.3
1,289,850	-				-0.1
1,289,916	+				+0.8
1,289,916	+				+0.8
1,289,917	-				-0.6
1,289,917	-				-0.1
1,289,917	-				+1.0
1,289,917	-				-0.0
1,289,918	+				-0.9
1,290,000	+		Echvi_1128	0.12	-0.4
1,290,000	+		Echvi_1128	0.12	+0.0
1,290,001	-		Echvi_1128	0.13	-1.0
1,290,053	+		Echvi_1128	0.20	+1.6
1,290,053	+		Echvi_1128	0.20	-0.3
1,290,086	+		Echvi_1128	0.25	+0.6
1,290,087	-		Echvi_1128	0.25	+0.1
1,290,163	-		Echvi_1128	0.36	+0.5
1,290,280	-		Echvi_1128	0.53	+0.4
1,290,280	-		Echvi_1128	0.53	-0.7
1,290,280	-		Echvi_1128	0.53	+0.3
1,290,358	-		Echvi_1128	0.64	-0.8
1,290,358	-		Echvi_1128	0.64	-0.5
1,290,358	-		Echvi_1128	0.64	-1.9
1,290,375	+		Echvi_1128	0.67	-2.1
1,290,376	-		Echvi_1128	0.67	+0.3
1,290,391	-		Echvi_1128	0.69	+0.6
1,290,443	-		Echvi_1128	0.77	-0.2
1,290,463	-		Echvi_1128	0.80	+0.5
1,290,488	+		Echvi_1128	0.83	+0.4
1,290,488	+		Echvi_1128	0.83	+1.2
1,290,489	-		Echvi_1128	0.84	-1.3
1,290,489	-		Echvi_1128	0.84	-0.3
1,290,494	-		Echvi_1128	0.84	-0.7
1,290,497	+		Echvi_1128	0.85	-0.5
1,290,497	+		Echvi_1128	0.85	-1.1
1,290,497	+		Echvi_1128	0.85	-0.5
1,290,498	-		Echvi_1128	0.85	-2.6
1,290,498	-		Echvi_1128	0.85	-1.2
1,290,536	-				+1.4
1,290,578	+				-0.6
1,290,579	-				-0.1
1,290,611	+				+1.3
1,290,611	+				-1.5
1,290,611	+				+0.4
1,290,612	-				-0.9
1,290,612	-				-0.0
1,290,642	+				+1.4
1,290,668	+				+0.9
1,290,681	-				+1.1
1,290,687	-				-0.2
1,290,765	+				-0.2
1,290,765	+				-0.2
1,290,890	+		Echvi_1129	0.16	-0.6
1,290,891	-		Echvi_1129	0.16	-0.4
1,290,901	+		Echvi_1129	0.16	-0.0
1,290,902	-		Echvi_1129	0.16	+0.9
1,290,939	-		Echvi_1129	0.19	-0.2
1,290,939	-		Echvi_1129	0.19	+0.2
1,290,946	+		Echvi_1129	0.19	+0.2
1,290,966	+		Echvi_1129	0.20	+0.1
1,290,966	+		Echvi_1129	0.20	-0.2
1,290,967	-		Echvi_1129	0.20	-1.2
1,290,967	-		Echvi_1129	0.20	+0.9
1,290,967	-		Echvi_1129	0.20	+0.6
1,291,064	-		Echvi_1129	0.27	-0.6
1,291,079	-		Echvi_1129	0.27	-1.5
1,291,079	-		Echvi_1129	0.27	+0.4
1,291,091	+		Echvi_1129	0.28	+0.3
1,291,168	-		Echvi_1129	0.33	-0.9
1,291,168	-		Echvi_1129	0.33	-1.5
1,291,172	-		Echvi_1129	0.33	-0.6
1,291,201	+		Echvi_1129	0.35	-1.0
1,291,202	-		Echvi_1129	0.35	-1.9
1,291,202	-		Echvi_1129	0.35	+0.4
1,291,202	-		Echvi_1129	0.35	-1.6
1,291,240	+		Echvi_1129	0.38	+1.0
1,291,241	-		Echvi_1129	0.38	-1.6
1,291,241	-		Echvi_1129	0.38	-0.2
1,291,242	+		Echvi_1129	0.38	-0.5
1,291,242	+		Echvi_1129	0.38	+0.6
1,291,242	+		Echvi_1129	0.38	+0.4
1,291,243	-		Echvi_1129	0.38	+0.3
1,291,245	+		Echvi_1129	0.38	+1.1
1,291,245	+		Echvi_1129	0.38	+0.0
1,291,246	-		Echvi_1129	0.38	+0.7
1,291,246	-		Echvi_1129	0.38	-0.4
1,291,262	-		Echvi_1129	0.39	-0.1
1,291,363	-		Echvi_1129	0.45	+0.4
1,291,444	+		Echvi_1129	0.50	+0.0
1,291,444	+		Echvi_1129	0.50	+1.6
1,291,444	+		Echvi_1129	0.50	+0.9
1,291,446	+		Echvi_1129	0.50	-1.0
1,291,446	+		Echvi_1129	0.50	+0.4
1,291,447	-		Echvi_1129	0.51	+0.7
1,291,447	-		Echvi_1129	0.51	+0.7
1,291,473	+		Echvi_1129	0.52	+0.9
1,291,576	-		Echvi_1129	0.59	+0.1