Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0915

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
1,044,632	+				-0.5
1,044,642	-				+0.9
1,044,642	-				+0.3
1,044,662	+				-0.4
1,044,663	-				+1.4
1,044,674	-				+0.5
1,044,706	+				-3.4
1,044,706	+				+0.1
1,044,749	+		Echvi_0915	0.20	-0.4
1,044,750	-		Echvi_0915	0.20	+0.6
1,044,750	-		Echvi_0915	0.20	-1.4
1,044,750	-		Echvi_0915	0.20	-2.3
1,044,751	+		Echvi_0915	0.20	+0.5
1,044,763	+		Echvi_0915	0.23	-0.4
1,044,783	+		Echvi_0915	0.29	-0.1
1,044,804	+		Echvi_0915	0.34	-0.1
1,044,804	+		Echvi_0915	0.34	+0.1
1,044,804	+		Echvi_0915	0.34	-1.1
1,044,805	-		Echvi_0915	0.34	+0.1
1,044,825	+		Echvi_0915	0.40	-0.9
1,044,826	-		Echvi_0915	0.40	-0.4
1,044,827	+		Echvi_0915	0.40	-0.6
1,044,827	+		Echvi_0915	0.40	-1.8
1,044,827	+		Echvi_0915	0.40	-1.5
1,044,828	-		Echvi_0915	0.40	+0.5
1,044,828	-		Echvi_0915	0.40	+0.6
1,044,859	+		Echvi_0915	0.49	-0.3
1,044,859	+		Echvi_0915	0.49	+0.4
1,044,859	+		Echvi_0915	0.49	-0.9
1,044,859	+		Echvi_0915	0.49	-0.5
1,044,859	+		Echvi_0915	0.49	-0.2
1,044,859	+		Echvi_0915	0.49	-0.1
1,044,859	+		Echvi_0915	0.49	+1.9
1,044,860	-		Echvi_0915	0.49	+0.8
1,044,860	-		Echvi_0915	0.49	-1.3
1,044,860	-		Echvi_0915	0.49	-1.2
1,044,860	-		Echvi_0915	0.49	-2.3
1,044,860	-		Echvi_0915	0.49	-1.4
1,044,860	-		Echvi_0915	0.49	-1.2
1,044,860	-		Echvi_0915	0.49	-1.6
1,044,889	+		Echvi_0915	0.57	-2.1
1,044,889	+		Echvi_0915	0.57	+0.0
1,044,929	+		Echvi_0915	0.67	+0.6
1,044,930	-		Echvi_0915	0.67	+1.2
1,045,025	+				+1.3
1,045,036	-				+0.3
1,045,036	-				+0.3
1,045,036	-				-0.3
1,045,036	-				+0.0
1,045,047	-				-0.3
1,045,053	-				-0.2
1,045,061	-				-1.6
1,045,061	-				+1.2
1,045,072	-				-0.9
1,045,072	-				+0.4
1,045,072	-				+0.1
1,045,099	-				-0.6
1,045,151	+				+2.3
1,045,170	-				-1.4
1,045,181	-				-0.9
1,045,184	+				-0.7
1,045,184	+				-1.7
1,045,202	+				-0.9
1,045,222	+				-0.0
1,045,222	+				-1.1
1,045,223	-				+0.4
1,045,306	-				-1.1
1,045,309	-				-0.1
1,045,323	+				-0.3
1,045,380	-				+1.1
1,045,402	+				-0.6
1,045,402	+				-0.1
1,045,420	+				-2.1
1,045,490	+		Echvi_0916	0.11	-1.0
1,045,490	+		Echvi_0916	0.11	+0.1
1,045,490	+		Echvi_0916	0.11	-0.0
1,045,491	-		Echvi_0916	0.11	+0.3
1,045,497	-		Echvi_0916	0.11	-0.8
1,045,613	+		Echvi_0916	0.16	+0.4
1,045,613	+		Echvi_0916	0.16	-0.3
1,045,613	+		Echvi_0916	0.16	-1.0
1,045,635	+		Echvi_0916	0.17	-0.5
1,045,723	+		Echvi_0916	0.20	+0.6
1,045,723	+		Echvi_0916	0.20	+1.5
1,045,724	-		Echvi_0916	0.20	-1.9
1,045,724	-		Echvi_0916	0.20	-0.7
1,045,724	-		Echvi_0916	0.20	+1.6
1,045,847	+		Echvi_0916	0.24	-0.6
1,045,911	-		Echvi_0916	0.27	-3.4
1,045,969	-		Echvi_0916	0.29	-0.6
1,045,979	+		Echvi_0916	0.29	+0.5
1,045,979	+		Echvi_0916	0.29	-1.2
1,045,980	-		Echvi_0916	0.29	+0.5
1,045,980	-		Echvi_0916	0.29	+1.9
1,045,980	-		Echvi_0916	0.29	+0.9
1,045,980	-		Echvi_0916	0.29	-0.2