Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0895

Experiment: m.b. Spectinomycin 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Spectinomycin 0.06 mg/ml
1,022,613	+		Echvi_0893	0.82	+2.2
1,022,700	+				-1.2
1,022,700	+				-1.2
1,022,771	-				+1.1
1,022,774	+				-0.9
1,022,775	-				-1.2
1,022,778	+				-1.2
1,022,779	-				-0.5
1,022,830	+				+1.5
1,022,895	-				-0.2
1,022,911	+				-0.1
1,022,912	-				-0.3
1,022,912	-				+0.0
1,022,931	+				+0.7
1,022,931	+				-0.1
1,022,932	-				-0.7
1,022,932	-				-0.2
1,022,975	+				+1.2
1,023,014	+				+0.2
1,023,014	+				-0.6
1,023,015	-				-0.1
1,023,017	+				-1.7
1,023,080	+				+0.9
1,023,131	+				-2.8
1,023,153	-				-1.7
1,023,201	-		Echvi_0894	0.18	-0.7
1,023,364	-		Echvi_0894	0.64	-0.1
1,023,364	-		Echvi_0894	0.64	-2.1
1,023,365	+		Echvi_0894	0.64	+0.1
1,023,366	-		Echvi_0894	0.64	-3.2
1,023,373	+		Echvi_0894	0.66	+0.3
1,023,379	+		Echvi_0894	0.68	-0.7
1,023,445	+		Echvi_0894	0.87	-0.1
1,023,477	-				-0.6
1,023,489	+				+0.3
1,023,490	-				-0.9
1,023,516	+				+1.1
1,023,517	-				+0.1
1,023,522	+				-2.2
1,023,541	-				-0.2
1,023,557	+				-2.4
1,023,558	-				+1.1
1,023,563	+				+0.0
1,023,563	+				-0.7
1,023,587	-				-1.8
1,023,700	+		Echvi_0895	0.25	+0.5
1,023,759	-		Echvi_0895	0.38	-0.7
1,023,759	-		Echvi_0895	0.38	-1.8
1,023,769	+		Echvi_0895	0.40	-0.9
1,023,770	-		Echvi_0895	0.40	+0.3
1,023,830	+		Echvi_0895	0.53	+0.4
1,023,831	-		Echvi_0895	0.54	+0.9
1,023,831	-		Echvi_0895	0.54	+1.5
1,023,831	-		Echvi_0895	0.54	-0.9
1,023,831	-		Echvi_0895	0.54	+0.1
1,023,831	-		Echvi_0895	0.54	-0.8
1,023,831	-		Echvi_0895	0.54	-0.6
1,023,832	+		Echvi_0895	0.54	-0.4
1,023,833	-		Echvi_0895	0.54	+0.2
1,023,833	-		Echvi_0895	0.54	-1.2
1,023,839	-		Echvi_0895	0.55	-1.5
1,023,896	+		Echvi_0895	0.68	-0.1
1,023,896	+		Echvi_0895	0.68	+0.3
1,023,897	-		Echvi_0895	0.68	+0.3
1,023,937	-		Echvi_0895	0.77	-2.2
1,023,975	+		Echvi_0895	0.85	+0.1
1,024,016	+				-1.0
1,024,016	+				-1.0
1,024,017	-				+0.6
1,024,017	-				+0.0
1,024,017	-				-0.2
1,024,058	+				+0.7
1,024,058	+				+0.2
1,024,058	+				+1.0
1,024,058	+				-1.7
1,024,059	-				+0.1
1,024,064	-				+2.9
1,024,064	-				-0.4
1,024,069	+				-1.7
1,024,070	-				+1.0
1,024,070	-				-0.9
1,024,071	+				+1.7
1,024,071	+				-1.2
1,024,071	+				+2.5
1,024,071	+				-1.0
1,024,072	-				-2.2
1,024,072	-				+0.1
1,024,149	-		Echvi_0896	0.10	+1.9
1,024,232	+		Echvi_0896	0.24	+0.7
1,024,257	-		Echvi_0896	0.28	-1.6
1,024,408	+		Echvi_0896	0.52	+1.7
1,024,408	+		Echvi_0896	0.52	-0.1
1,024,408	+		Echvi_0896	0.52	+1.4
1,024,409	-		Echvi_0896	0.52	+1.6
1,024,409	-		Echvi_0896	0.52	-3.4
1,024,415	+		Echvi_0896	0.53	-0.1
1,024,415	+		Echvi_0896	0.53	-1.5
1,024,415	+		Echvi_0896	0.53	-0.2
1,024,416	-		Echvi_0896	0.53	-0.7
1,024,576	+		Echvi_0896	0.79	+0.8
1,024,577	-		Echvi_0896	0.79	+0.1
1,024,578	+		Echvi_0896	0.80	-1.4
1,024,578	+		Echvi_0896	0.80	+0.7
1,024,579	-		Echvi_0896	0.80	+0.9
1,024,703	-				+0.1
1,024,811	+				+0.6
1,024,811	+				+0.7
1,024,842	-		Echvi_0897	0.21	-0.3
1,024,842	-		Echvi_0897	0.21	-0.4
1,024,842	-		Echvi_0897	0.21	-0.7
1,024,842	-		Echvi_0897	0.21	+0.3
1,024,842	-		Echvi_0897	0.21	+1.9
1,024,938	+		Echvi_0897	0.85	+0.6
1,024,983	+				+0.4
1,024,984	-				+0.8