Experiment: m.b. Spectinomycin 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0467 and Echvi_0468 are separated by 478 nucleotides Echvi_0468 and Echvi_0469 are separated by 117 nucleotides
Echvi_0467: Echvi_0467 - hypothetical protein, at 512,041 to 512,457
_0467
Echvi_0468: Echvi_0468 - SusD family., at 512,936 to 514,681
_0468
Echvi_0469: Echvi_0469 - TonB-linked outer membrane protein, SusC/RagA family, at 514,799 to 517,885
_0469
Position (kb) 512
513
514
515 Strain fitness (log2 ratio) -2
-1
0
1
2 at 511.940 kb on + strand at 511.940 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.983 kb on + strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.984 kb on - strand at 511.987 kb on + strand at 511.991 kb on + strand at 511.991 kb on + strand at 511.991 kb on + strand at 512.011 kb on + strand at 512.038 kb on + strand at 512.070 kb on + strand at 512.079 kb on + strand at 512.089 kb on - strand, within Echvi_0467 at 512.124 kb on + strand, within Echvi_0467 at 512.179 kb on - strand, within Echvi_0467 at 512.179 kb on - strand, within Echvi_0467 at 512.182 kb on - strand, within Echvi_0467 at 512.182 kb on - strand, within Echvi_0467 at 512.249 kb on + strand, within Echvi_0467 at 512.256 kb on + strand, within Echvi_0467 at 512.257 kb on - strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.260 kb on + strand, within Echvi_0467 at 512.261 kb on - strand, within Echvi_0467 at 512.261 kb on - strand, within Echvi_0467 at 512.261 kb on - strand, within Echvi_0467 at 512.261 kb on - strand, within Echvi_0467 at 512.261 kb on - strand, within Echvi_0467 at 512.262 kb on + strand, within Echvi_0467 at 512.262 kb on + strand, within Echvi_0467 at 512.278 kb on + strand, within Echvi_0467 at 512.278 kb on + strand, within Echvi_0467 at 512.280 kb on + strand, within Echvi_0467 at 512.280 kb on + strand, within Echvi_0467 at 512.280 kb on + strand, within Echvi_0467 at 512.281 kb on - strand, within Echvi_0467 at 512.281 kb on - strand, within Echvi_0467 at 512.281 kb on - strand, within Echvi_0467 at 512.345 kb on - strand, within Echvi_0467 at 512.345 kb on - strand, within Echvi_0467 at 512.349 kb on - strand, within Echvi_0467 at 512.378 kb on + strand, within Echvi_0467 at 512.382 kb on + strand, within Echvi_0467 at 512.459 kb on + strand at 512.460 kb on - strand at 512.490 kb on - strand at 512.502 kb on + strand at 512.502 kb on + strand at 512.503 kb on - strand at 512.528 kb on + strand at 512.679 kb on + strand at 512.694 kb on + strand at 512.708 kb on - strand at 512.727 kb on + strand at 512.727 kb on + strand at 512.728 kb on - strand at 512.738 kb on + strand at 512.738 kb on + strand at 512.742 kb on + strand at 512.742 kb on + strand at 512.742 kb on + strand at 512.743 kb on - strand at 512.751 kb on + strand at 512.752 kb on - strand at 512.754 kb on - strand at 512.772 kb on - strand at 512.777 kb on - strand at 512.780 kb on + strand at 512.780 kb on + strand at 512.781 kb on - strand at 512.911 kb on - strand at 513.023 kb on + strand at 513.024 kb on - strand at 513.060 kb on + strand at 513.061 kb on - strand at 513.061 kb on - strand at 513.082 kb on - strand at 513.206 kb on - strand, within Echvi_0468 at 513.270 kb on + strand, within Echvi_0468 at 513.307 kb on + strand, within Echvi_0468 at 513.312 kb on + strand, within Echvi_0468 at 513.312 kb on + strand, within Echvi_0468 at 513.312 kb on + strand, within Echvi_0468 at 513.312 kb on + strand, within Echvi_0468 at 513.313 kb on - strand, within Echvi_0468 at 513.313 kb on - strand, within Echvi_0468 at 513.316 kb on - strand, within Echvi_0468 at 513.412 kb on + strand, within Echvi_0468 at 513.412 kb on + strand, within Echvi_0468 at 513.423 kb on + strand, within Echvi_0468 at 513.451 kb on + strand, within Echvi_0468 at 513.465 kb on + strand, within Echvi_0468 at 513.466 kb on - strand, within Echvi_0468 at 513.499 kb on + strand, within Echvi_0468 at 513.499 kb on + strand, within Echvi_0468 at 513.499 kb on + strand, within Echvi_0468 at 513.499 kb on + strand, within Echvi_0468 at 513.500 kb on - strand, within Echvi_0468 at 513.500 kb on - strand, within Echvi_0468 at 513.503 kb on - strand, within Echvi_0468 at 513.585 kb on + strand, within Echvi_0468 at 513.605 kb on - strand, within Echvi_0468 at 513.652 kb on + strand, within Echvi_0468 at 513.693 kb on - strand, within Echvi_0468 at 513.724 kb on - strand, within Echvi_0468 at 513.910 kb on - strand, within Echvi_0468 at 513.928 kb on - strand, within Echvi_0468 at 513.941 kb on - strand, within Echvi_0468 at 513.944 kb on - strand, within Echvi_0468 at 513.944 kb on - strand, within Echvi_0468 at 513.953 kb on - strand, within Echvi_0468 at 513.953 kb on - strand, within Echvi_0468 at 513.953 kb on - strand, within Echvi_0468 at 513.963 kb on - strand, within Echvi_0468 at 513.997 kb on + strand, within Echvi_0468 at 513.997 kb on + strand, within Echvi_0468 at 514.002 kb on + strand, within Echvi_0468 at 514.002 kb on + strand, within Echvi_0468 at 514.003 kb on - strand, within Echvi_0468 at 514.016 kb on + strand, within Echvi_0468 at 514.062 kb on + strand, within Echvi_0468 at 514.062 kb on + strand, within Echvi_0468 at 514.063 kb on - strand, within Echvi_0468 at 514.066 kb on + strand, within Echvi_0468 at 514.066 kb on + strand, within Echvi_0468 at 514.067 kb on - strand, within Echvi_0468 at 514.067 kb on - strand, within Echvi_0468 at 514.067 kb on - strand, within Echvi_0468 at 514.075 kb on + strand, within Echvi_0468 at 514.096 kb on + strand, within Echvi_0468 at 514.134 kb on + strand, within Echvi_0468 at 514.134 kb on + strand, within Echvi_0468 at 514.234 kb on - strand, within Echvi_0468 at 514.360 kb on + strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.361 kb on - strand, within Echvi_0468 at 514.501 kb on + strand, within Echvi_0468 at 514.501 kb on + strand, within Echvi_0468 at 514.502 kb on - strand, within Echvi_0468 at 514.511 kb on + strand at 514.511 kb on + strand at 514.511 kb on + strand at 514.511 kb on + strand at 514.512 kb on - strand at 514.512 kb on - strand at 514.512 kb on - strand at 514.512 kb on - strand at 514.515 kb on + strand at 514.616 kb on - strand at 514.621 kb on + strand at 514.672 kb on + strand at 514.673 kb on - strand at 514.814 kb on - strand at 514.840 kb on + strand at 514.924 kb on - strand at 515.016 kb on + strand at 515.026 kb on + strand at 515.047 kb on - strand at 515.080 kb on + strand at 515.080 kb on + strand at 515.081 kb on - strand at 515.176 kb on + strand, within Echvi_0469 at 515.176 kb on + strand, within Echvi_0469 at 515.176 kb on + strand, within Echvi_0469 at 515.177 kb on - strand, within Echvi_0469 at 515.177 kb on - strand, within Echvi_0469 at 515.177 kb on - strand, within Echvi_0469 at 515.187 kb on + strand, within Echvi_0469 at 515.188 kb on - strand, within Echvi_0469 at 515.188 kb on - strand, within Echvi_0469 at 515.194 kb on + strand, within Echvi_0469 at 515.241 kb on + strand, within Echvi_0469 at 515.245 kb on + strand, within Echvi_0469 at 515.254 kb on + strand, within Echvi_0469 at 515.265 kb on + strand, within Echvi_0469 at 515.265 kb on + strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.266 kb on - strand, within Echvi_0469 at 515.369 kb on - strand, within Echvi_0469 at 515.369 kb on - strand, within Echvi_0469 at 515.386 kb on + strand, within Echvi_0469 at 515.388 kb on + strand, within Echvi_0469 at 515.388 kb on + strand, within Echvi_0469 at 515.389 kb on - strand, within Echvi_0469 at 515.389 kb on - strand, within Echvi_0469 at 515.418 kb on + strand, within Echvi_0469 at 515.482 kb on - strand, within Echvi_0469 at 515.496 kb on - strand, within Echvi_0469 at 515.504 kb on - strand, within Echvi_0469 at 515.536 kb on - strand, within Echvi_0469
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Spectinomycin 0.06 mg/ml remove 511,940 + -0.2 511,940 + +1.5 511,983 + +1.3 511,983 + -1.6 511,983 + -1.7 511,983 + +1.6 511,983 + -2.1 511,983 + -0.4 511,983 + -1.1 511,984 - +0.7 511,984 - -0.3 511,984 - +0.5 511,984 - +0.4 511,984 - -0.4 511,984 - +0.5 511,987 + -1.6 511,991 + +0.1 511,991 + +0.2 511,991 + -0.1 512,011 + -1.3 512,038 + -1.6 512,070 + +1.9 512,079 + +0.5 512,089 - Echvi_0467 0.12 -0.5 512,124 + Echvi_0467 0.20 +1.3 512,179 - Echvi_0467 0.33 -1.2 512,179 - Echvi_0467 0.33 +0.6 512,182 - Echvi_0467 0.34 -1.9 512,182 - Echvi_0467 0.34 -0.7 512,249 + Echvi_0467 0.50 -0.3 512,256 + Echvi_0467 0.52 -1.4 512,257 - Echvi_0467 0.52 -0.6 512,260 + Echvi_0467 0.53 -0.7 512,260 + Echvi_0467 0.53 +1.3 512,260 + Echvi_0467 0.53 +1.6 512,260 + Echvi_0467 0.53 -1.4 512,260 + Echvi_0467 0.53 +0.7 512,260 + Echvi_0467 0.53 -0.2 512,260 + Echvi_0467 0.53 -0.3 512,261 - Echvi_0467 0.53 -0.5 512,261 - Echvi_0467 0.53 -1.6 512,261 - Echvi_0467 0.53 +0.0 512,261 - Echvi_0467 0.53 -1.0 512,261 - Echvi_0467 0.53 -0.3 512,262 + Echvi_0467 0.53 -1.3 512,262 + Echvi_0467 0.53 -0.2 512,278 + Echvi_0467 0.57 -0.8 512,278 + Echvi_0467 0.57 -0.7 512,280 + Echvi_0467 0.57 +0.1 512,280 + Echvi_0467 0.57 -0.3 512,280 + Echvi_0467 0.57 +0.6 512,281 - Echvi_0467 0.58 +0.2 512,281 - Echvi_0467 0.58 -0.8 512,281 - Echvi_0467 0.58 -1.7 512,345 - Echvi_0467 0.73 +0.7 512,345 - Echvi_0467 0.73 -0.3 512,349 - Echvi_0467 0.74 -1.2 512,378 + Echvi_0467 0.81 -1.4 512,382 + Echvi_0467 0.82 +1.0 512,459 + -1.7 512,460 - +0.0 512,490 - +0.3 512,502 + -1.1 512,502 + -1.1 512,503 - +0.2 512,528 + -2.3 512,679 + -0.4 512,694 + +1.1 512,708 - +0.2 512,727 + -1.7 512,727 + +0.6 512,728 - -0.1 512,738 + -1.9 512,738 + +2.0 512,742 + +0.7 512,742 + -0.8 512,742 + -2.1 512,743 - -0.4 512,751 + -0.2 512,752 - -0.3 512,754 - +0.7 512,772 - -0.6 512,777 - +0.6 512,780 + +0.3 512,780 + +0.2 512,781 - -0.1 512,911 - -1.6 513,023 + -0.2 513,024 - -1.2 513,060 + +1.0 513,061 - -0.1 513,061 - +0.5 513,082 - -1.6 513,206 - Echvi_0468 0.15 -1.4 513,270 + Echvi_0468 0.19 -0.3 513,307 + Echvi_0468 0.21 -0.7 513,312 + Echvi_0468 0.22 -1.0 513,312 + Echvi_0468 0.22 -1.4 513,312 + Echvi_0468 0.22 -1.1 513,312 + Echvi_0468 0.22 -1.4 513,313 - Echvi_0468 0.22 -2.0 513,313 - Echvi_0468 0.22 -0.9 513,316 - Echvi_0468 0.22 -0.3 513,412 + Echvi_0468 0.27 -0.8 513,412 + Echvi_0468 0.27 +0.5 513,423 + Echvi_0468 0.28 -0.9 513,451 + Echvi_0468 0.29 -1.7 513,465 + Echvi_0468 0.30 -0.5 513,466 - Echvi_0468 0.30 +0.1 513,499 + Echvi_0468 0.32 -1.1 513,499 + Echvi_0468 0.32 -1.5 513,499 + Echvi_0468 0.32 -2.0 513,499 + Echvi_0468 0.32 -0.3 513,500 - Echvi_0468 0.32 -0.4 513,500 - Echvi_0468 0.32 +1.5 513,503 - Echvi_0468 0.32 +0.8 513,585 + Echvi_0468 0.37 -1.4 513,605 - Echvi_0468 0.38 -0.5 513,652 + Echvi_0468 0.41 -0.4 513,693 - Echvi_0468 0.43 -0.9 513,724 - Echvi_0468 0.45 -1.5 513,910 - Echvi_0468 0.56 -0.7 513,928 - Echvi_0468 0.57 +0.1 513,941 - Echvi_0468 0.58 -2.6 513,944 - Echvi_0468 0.58 -1.2 513,944 - Echvi_0468 0.58 -0.3 513,953 - Echvi_0468 0.58 -0.8 513,953 - Echvi_0468 0.58 -0.1 513,953 - Echvi_0468 0.58 +1.0 513,963 - Echvi_0468 0.59 -0.1 513,997 + Echvi_0468 0.61 +1.0 513,997 + Echvi_0468 0.61 -1.3 514,002 + Echvi_0468 0.61 +1.5 514,002 + Echvi_0468 0.61 +0.1 514,003 - Echvi_0468 0.61 -1.1 514,016 + Echvi_0468 0.62 +0.4 514,062 + Echvi_0468 0.64 +0.4 514,062 + Echvi_0468 0.64 +1.3 514,063 - Echvi_0468 0.65 +0.9 514,066 + Echvi_0468 0.65 +0.6 514,066 + Echvi_0468 0.65 +0.5 514,067 - Echvi_0468 0.65 -0.2 514,067 - Echvi_0468 0.65 +1.9 514,067 - Echvi_0468 0.65 -0.8 514,075 + Echvi_0468 0.65 +0.2 514,096 + Echvi_0468 0.66 -0.6 514,134 + Echvi_0468 0.69 +1.5 514,134 + Echvi_0468 0.69 +0.7 514,234 - Echvi_0468 0.74 +0.4 514,360 + Echvi_0468 0.82 -1.2 514,361 - Echvi_0468 0.82 -0.2 514,361 - Echvi_0468 0.82 +0.3 514,361 - Echvi_0468 0.82 -1.3 514,361 - Echvi_0468 0.82 -0.9 514,501 + Echvi_0468 0.90 +1.5 514,501 + Echvi_0468 0.90 -0.4 514,502 - Echvi_0468 0.90 -0.1 514,511 + +1.4 514,511 + +0.6 514,511 + -0.6 514,511 + -0.0 514,512 - -0.9 514,512 - -0.4 514,512 - -1.3 514,512 - -0.7 514,515 + +0.8 514,616 - +0.3 514,621 + +0.9 514,672 + +0.4 514,673 - +0.5 514,814 - +0.3 514,840 + +0.7 514,924 - +0.2 515,016 + -0.8 515,026 + -0.2 515,047 - -0.3 515,080 + -0.5 515,080 + +0.7 515,081 - -1.3 515,176 + Echvi_0469 0.12 -0.7 515,176 + Echvi_0469 0.12 -0.7 515,176 + Echvi_0469 0.12 -1.5 515,177 - Echvi_0469 0.12 -0.8 515,177 - Echvi_0469 0.12 +0.6 515,177 - Echvi_0469 0.12 +0.9 515,187 + Echvi_0469 0.13 +0.4 515,188 - Echvi_0469 0.13 -0.4 515,188 - Echvi_0469 0.13 -0.7 515,194 + Echvi_0469 0.13 -0.1 515,241 + Echvi_0469 0.14 +0.9 515,245 + Echvi_0469 0.14 +0.9 515,254 + Echvi_0469 0.15 +0.8 515,265 + Echvi_0469 0.15 +0.4 515,265 + Echvi_0469 0.15 +0.7 515,266 - Echvi_0469 0.15 -0.1 515,266 - Echvi_0469 0.15 +0.0 515,266 - Echvi_0469 0.15 -0.1 515,266 - Echvi_0469 0.15 -0.4 515,369 - Echvi_0469 0.18 -0.7 515,369 - Echvi_0469 0.18 -0.3 515,386 + Echvi_0469 0.19 +0.2 515,388 + Echvi_0469 0.19 -2.2 515,388 + Echvi_0469 0.19 +0.2 515,389 - Echvi_0469 0.19 -0.6 515,389 - Echvi_0469 0.19 -0.3 515,418 + Echvi_0469 0.20 -0.3 515,482 - Echvi_0469 0.22 -1.7 515,496 - Echvi_0469 0.23 -1.6 515,504 - Echvi_0469 0.23 -0.7 515,536 - Echvi_0469 0.24 -1.6
Or see this region's nucleotide sequence