Strain Fitness in Pseudomonas sp. RS175 around PFR28_04267

Experiment: L-Lactate (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C) 10 mM
4,868,889	+		PFR28_04266	0.36	-1.1
4,868,995	-		PFR28_04266	0.43	+0.2
4,869,115	-		PFR28_04266	0.52	+0.3
4,869,115	-		PFR28_04266	0.52	-0.3
4,869,115	-		PFR28_04266	0.52	+0.3
4,869,115	-		PFR28_04266	0.52	-0.1
4,869,116	+		PFR28_04266	0.52	+1.6
4,869,116	+		PFR28_04266	0.52	-1.1
4,869,116	+		PFR28_04266	0.52	+0.9
4,869,116	+		PFR28_04266	0.52	-0.9
4,869,116	+		PFR28_04266	0.52	+1.3
4,869,116	+		PFR28_04266	0.52	+0.1
4,869,116	+		PFR28_04266	0.52	-0.0
4,869,116	+		PFR28_04266	0.52	+0.6
4,869,117	-		PFR28_04266	0.52	+0.1
4,869,117	-		PFR28_04266	0.52	-0.5
4,869,117	-		PFR28_04266	0.52	-1.2
4,869,117	-		PFR28_04266	0.52	-0.4
4,869,117	-		PFR28_04266	0.52	-2.3
4,869,117	-		PFR28_04266	0.52	-1.1
4,869,117	-		PFR28_04266	0.52	+0.8
4,869,117	-		PFR28_04266	0.52	-1.7
4,869,117	-		PFR28_04266	0.52	-0.3
4,869,166	+		PFR28_04266	0.55	+1.1
4,869,166	+		PFR28_04266	0.55	+0.9
4,869,166	+		PFR28_04266	0.55	+2.3
4,869,166	+		PFR28_04266	0.55	+0.3
4,869,166	+		PFR28_04266	0.55	+1.7
4,869,166	+		PFR28_04266	0.55	+0.5
4,869,167	-		PFR28_04266	0.55	-0.2
4,869,167	-		PFR28_04266	0.55	-0.8
4,869,167	-		PFR28_04266	0.55	-0.1
4,869,167	-		PFR28_04266	0.55	-0.3
4,869,167	-		PFR28_04266	0.55	+0.3
4,869,167	-		PFR28_04266	0.55	-0.8
4,869,167	-		PFR28_04266	0.55	-1.8
4,869,167	-		PFR28_04266	0.55	-0.3
4,869,167	-		PFR28_04266	0.55	+0.4
4,869,167	-		PFR28_04266	0.55	+1.7
4,869,167	-		PFR28_04266	0.55	+0.7
4,869,170	+		PFR28_04266	0.55	-0.4
4,869,170	+		PFR28_04266	0.55	+0.1
4,869,170	+		PFR28_04266	0.55	-2.1
4,869,170	+		PFR28_04266	0.55	+1.0
4,869,171	-		PFR28_04266	0.55	+0.5
4,869,171	-		PFR28_04266	0.55	+0.8
4,869,171	-		PFR28_04266	0.55	+0.8
4,869,171	-		PFR28_04266	0.55	-0.8
4,869,171	-		PFR28_04266	0.55	-0.2
4,869,171	-		PFR28_04266	0.55	-0.4
4,869,171	-		PFR28_04266	0.55	-0.8
4,869,235	+		PFR28_04266	0.60	-1.0
4,869,235	+		PFR28_04266	0.60	-0.5
4,869,262	+		PFR28_04266	0.62	-0.8
4,869,262	+		PFR28_04266	0.62	-1.6
4,869,263	-		PFR28_04266	0.62	+1.3
4,869,263	-		PFR28_04266	0.62	-1.2
4,869,307	+		PFR28_04266	0.65	-1.2
4,869,308	-		PFR28_04266	0.65	-0.0
4,869,308	-		PFR28_04266	0.65	-1.2
4,869,384	+		PFR28_04266	0.70	+1.0
4,869,384	+		PFR28_04266	0.70	+0.6
4,869,463	+		PFR28_04266	0.76	+2.0
4,869,464	-		PFR28_04266	0.76	-2.8
4,869,464	-		PFR28_04266	0.76	+2.3
4,869,490	+		PFR28_04266	0.78	-2.2
4,869,490	+		PFR28_04266	0.78	-0.0
4,869,490	+		PFR28_04266	0.78	+1.1
4,869,490	+		PFR28_04266	0.78	+3.0
4,869,491	-		PFR28_04266	0.78	+0.4
4,869,491	-		PFR28_04266	0.78	-0.8
4,869,524	-		PFR28_04266	0.80	-0.3
4,869,526	+		PFR28_04266	0.80	+1.1
4,869,527	-		PFR28_04266	0.80	-2.8
4,869,667	+				-2.8
4,869,668	-				+0.3
4,869,751	+				+0.1
4,869,751	+				-2.3
4,869,751	+				+0.7
4,869,824	-				-1.1
4,869,854	+				-1.1
4,869,855	-				-1.9
4,870,148	+		PFR28_04267	0.59	-0.7
4,870,148	+		PFR28_04267	0.59	-1.2
4,870,148	+		PFR28_04267	0.59	-0.1
4,870,149	-		PFR28_04267	0.59	-0.1
4,870,149	-		PFR28_04267	0.59	-0.0
4,870,149	-		PFR28_04267	0.59	-0.8
4,870,485	+				-0.4
4,870,485	+				+1.5
4,870,485	+				-0.8
4,870,485	+				-0.1
4,870,486	-				-2.0
4,870,486	-				+0.6
4,870,486	-				+1.1
4,870,486	-				-1.1
4,870,486	-				+1.1
4,870,486	-				-0.7
4,870,593	+				+0.2
4,870,593	+				-0.0
4,870,594	-		PFR28_04268	0.10	+0.3
4,870,666	-		PFR28_04268	0.15	-0.1
4,870,666	-		PFR28_04268	0.15	-1.0
4,870,666	-		PFR28_04268	0.15	-2.5
4,870,666	-		PFR28_04268	0.15	-0.6
4,870,678	-		PFR28_04268	0.15	+0.7
4,870,678	-		PFR28_04268	0.15	-2.3
4,870,956	+		PFR28_04268	0.33	-2.3
4,870,957	-		PFR28_04268	0.33	+0.7
4,871,008	-		PFR28_04268	0.36	-1.2
4,871,097	+		PFR28_04268	0.42	+0.1
4,871,098	-		PFR28_04268	0.42	+1.8
4,871,135	+		PFR28_04268	0.44	+0.4
4,871,136	-		PFR28_04268	0.44	-2.7
4,871,220	+		PFR28_04268	0.49	+0.2
4,871,220	+		PFR28_04268	0.49	+1.4
4,871,220	+		PFR28_04268	0.49	-0.1
4,871,220	+		PFR28_04268	0.49	-0.0
4,871,220	+		PFR28_04268	0.49	-0.4
4,871,220	+		PFR28_04268	0.49	+0.5
4,871,220	+		PFR28_04268	0.49	-1.6
4,871,220	+		PFR28_04268	0.49	+0.3
4,871,220	+		PFR28_04268	0.49	+3.3
4,871,220	+		PFR28_04268	0.49	+0.7
4,871,220	+		PFR28_04268	0.49	+0.3
4,871,221	-		PFR28_04268	0.49	-2.4
4,871,221	-		PFR28_04268	0.49	+0.9
4,871,221	-		PFR28_04268	0.49	-1.2
4,871,221	-		PFR28_04268	0.49	-0.7
4,871,221	-		PFR28_04268	0.49	-0.4
4,871,221	-		PFR28_04268	0.49	-1.7
4,871,221	-		PFR28_04268	0.49	+0.6
4,871,221	-		PFR28_04268	0.49	-0.5
4,871,221	-		PFR28_04268	0.49	-2.2
4,871,221	-		PFR28_04268	0.49	+0.7
4,871,221	-		PFR28_04268	0.49	-0.0
4,871,224	+		PFR28_04268	0.49	-0.9
4,871,224	+		PFR28_04268	0.49	-0.5
4,871,225	-		PFR28_04268	0.50	-0.8
4,871,225	-		PFR28_04268	0.50	-1.7
4,871,225	-		PFR28_04268	0.50	+0.2
4,871,225	-		PFR28_04268	0.50	-1.3
4,871,306	+		PFR28_04268	0.55	-0.5
4,871,306	+		PFR28_04268	0.55	-0.7
4,871,306	+		PFR28_04268	0.55	-2.7
4,871,306	+		PFR28_04268	0.55	+0.1
4,871,306	+		PFR28_04268	0.55	+1.4
4,871,307	-		PFR28_04268	0.55	+1.4
4,871,307	-		PFR28_04268	0.55	+0.7
4,871,307	-		PFR28_04268	0.55	+0.5
4,871,327	+		PFR28_04268	0.56	-1.3
4,871,327	+		PFR28_04268	0.56	-0.0
4,871,327	+		PFR28_04268	0.56	+0.4
4,871,327	+		PFR28_04268	0.56	+0.4
4,871,328	-		PFR28_04268	0.56	+1.7
4,871,328	-		PFR28_04268	0.56	-0.8
4,871,328	-		PFR28_04268	0.56	-0.6
4,871,328	-		PFR28_04268	0.56	+0.6
4,871,328	-		PFR28_04268	0.56	-0.7
4,871,328	-		PFR28_04268	0.56	-1.5