Strain Fitness in Pseudomonas sp. RS175 around PFR28_03192

Experiment: L-Lactate (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Lactate (C) 10 mM
3,701,805	+				-0.1
3,701,805	+				-2.0
3,701,805	+				-0.7
3,701,805	+				-0.1
3,701,806	-				-0.1
3,701,806	-				+0.7
3,701,806	-				+0.2
3,701,820	+				-1.6
3,701,820	+				-1.3
3,701,820	+				+0.5
3,701,821	-				+0.2
3,701,821	-				+0.0
3,701,821	-				-0.8
3,701,841	+				+0.7
3,701,841	+				-1.2
3,701,842	-				+0.6
3,701,842	-				-2.3
3,701,854	+				-0.6
3,701,854	+				+1.6
3,701,871	+				+1.6
3,701,872	-				-0.6
3,701,872	-				+3.5
3,701,872	-				-0.9
3,701,908	+				+1.5
3,701,908	+				+1.7
3,701,908	+				-0.8
3,701,908	+				-1.1
3,701,908	+				+0.1
3,701,909	-				+1.2
3,701,996	+				-1.6
3,702,188	+				+0.1
3,702,188	+				+0.8
3,702,189	-				+1.8
3,702,189	-				+0.2
3,702,189	-				-0.5
3,702,203	+				+0.0
3,702,204	-				-2.2
3,702,205	+				+1.1
3,702,205	+				-0.4
3,702,205	+				-1.8
3,702,271	+				+1.0
3,702,271	+				-1.6
3,702,271	+				-0.0
3,702,272	-				+1.5
3,702,272	-				+0.6
3,702,374	+				+0.8
3,702,375	-				+1.7
3,702,377	+				+0.2
3,702,377	+				+0.5
3,702,377	+				-0.4
3,702,378	-				-0.6
3,702,390	-				+0.3
3,702,392	+				+1.6
3,702,393	-				-0.2
3,702,393	-				-0.0
3,702,393	-				+0.9
3,702,498	+				-0.1
3,702,530	+				-0.6
3,702,531	-				-1.7
3,702,531	-				-0.2
3,702,531	-				+0.7
3,702,553	+				-0.2
3,702,553	+				-0.6
3,702,554	-				+1.5
3,702,638	+				-0.4
3,702,638	+				+0.7
3,702,638	+				-1.4
3,702,638	+				+0.7
3,702,638	+				-1.4
3,702,638	+				+0.9
3,702,638	+				+1.3
3,702,638	+				-0.0
3,702,638	+				+0.2
3,702,638	+				+0.5
3,702,639	-				+0.2
3,702,639	-				+1.6
3,702,639	-				+1.3
3,702,639	-				+0.0
3,702,639	-				+1.1
3,702,639	-				+1.1
3,702,639	-				-0.7
3,702,639	-				-0.6
3,702,639	-				-0.3
3,702,639	-				-1.6
3,702,639	-				+0.3
3,702,639	-				-0.1
3,702,642	+				-0.9
3,702,642	+				+0.7
3,702,642	+				+1.0
3,702,642	+				-0.0
3,702,642	+				-2.1
3,702,642	+				-1.6
3,702,642	+				+0.5
3,702,642	+				-2.1
3,702,642	+				-1.3
3,702,642	+				+0.5
3,702,643	-				+1.3
3,702,643	-				-1.6
3,702,643	-				+0.6
3,702,643	-				-1.8
3,702,643	-				-0.6
3,702,643	-				-2.9
3,702,643	-				+2.1
3,702,643	-				-0.4
3,702,643	-				-2.0
3,702,643	-				-0.8
3,702,646	+				+1.6
3,702,646	+				+0.6
3,702,646	+				+0.1
3,702,646	+				-2.4
3,702,647	-				+0.3
3,702,670	+				+0.9
3,702,670	+				-0.6
3,702,670	+				-0.7
3,702,670	+				+2.0
3,702,670	+				+0.2
3,702,670	+				-1.0
3,702,670	+				-0.5
3,702,670	+				-0.6
3,702,670	+				-0.2
3,702,670	+				+0.6
3,702,670	+				-0.7
3,702,670	+				+1.4
3,702,670	+				+0.3
3,702,670	+				-1.9
3,702,670	+				-1.9
3,702,671	-				-0.8
3,702,671	-				-1.9
3,702,671	-				-0.4
3,702,671	-				+0.8
3,702,671	-				-1.2
3,702,671	-				-1.1
3,702,671	-				+0.7
3,702,671	-				+0.2
3,702,671	-				+0.4
3,702,671	-				-0.2
3,702,671	-				-1.6
3,702,671	-				+0.3
3,702,672	+				+2.1
3,702,672	+				-0.2
3,702,672	+				+1.0
3,702,672	+				+0.9
3,702,672	+				-0.0
3,702,673	-				-2.1
3,702,673	-				+0.2
3,702,673	-				-2.6
3,702,673	-				-1.0
3,702,673	-				-0.1
3,702,673	-				-0.3
3,702,673	-				-1.7
3,702,673	-				-0.4
3,702,673	-				+2.1
3,702,673	-				-1.9
3,702,673	-				-0.4
3,702,673	-				-1.3
3,702,750	+				-0.9
3,702,750	+				+1.7
3,702,751	-				+0.5
3,702,767	+				-2.8
3,702,768	-				+0.7
3,702,782	+				+0.2
3,702,782	+				+0.6
3,702,782	+				+1.8
3,702,783	-				+1.1
3,702,783	-				+1.0
3,702,783	-				-1.5
3,702,948	+		PFR28_03192	0.67	-0.4
3,702,948	+		PFR28_03192	0.67	-2.1
3,702,961	-		PFR28_03192	0.72	+1.5
3,703,074	-				-1.0
3,703,112	+				-3.1
3,703,112	+				+0.3
3,703,112	+				-0.6
3,703,124	+				-1.3
3,703,124	+				-1.3
3,703,124	+				-0.5
3,703,125	-				-0.0
3,703,125	-				+0.4
3,703,131	+				+0.4
3,703,180	+				-1.6
3,703,280	+				+0.7
3,703,281	-				-2.1
3,703,296	+				-0.5
3,703,296	+				-0.1
3,703,296	+				+0.2
3,703,297	-				-1.2
3,703,297	-				-0.7
3,703,297	-				-0.5
3,703,327	+				-1.0
3,703,327	+				+0.2
3,703,328	-				+0.7
3,703,328	-				+1.0
3,703,328	-				+0.7
3,703,328	-				-0.4
3,703,341	+				-2.6
3,703,352	-		PFR28_03193	0.11	-0.9
3,703,352	-		PFR28_03193	0.11	-0.0
3,703,498	+		PFR28_03193	0.42	-2.2
3,703,498	+		PFR28_03193	0.42	+1.6
3,703,498	+		PFR28_03193	0.42	-0.9
3,703,498	+		PFR28_03193	0.42	-0.9
3,703,499	-		PFR28_03193	0.42	-1.8
3,703,499	-		PFR28_03193	0.42	+0.7
3,703,499	-		PFR28_03193	0.42	-0.9
3,703,499	-		PFR28_03193	0.42	+0.2
3,703,499	-		PFR28_03193	0.42	+0.3
3,703,802	+				-0.8
3,703,802	+				+1.3
3,703,803	-				-1.9
3,703,803	-				+0.9
3,703,863	+				+0.4
3,703,864	-				+0.0
3,703,864	-				-0.2
3,703,864	-				+1.6
3,703,864	-				-0.3
3,703,865	+				+1.7
3,703,865	+				-1.0
3,703,882	+				-0.6
3,703,883	-				-0.6
3,703,888	+				-1.0
3,703,919	+				-0.8
3,703,919	+				+0.8
3,703,920	-				+1.5
3,703,920	-				-1.2
3,703,965	+				+1.3
3,703,965	+				+0.6
3,703,966	-				-0.7
3,703,966	-				+0.2