Experiment: m.b. Tetracycline 0.12 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_4603 and Echvi_4604 are separated by 64 nucleotides Echvi_4604 and Echvi_4605 overlap by 4 nucleotides Echvi_4605 and Echvi_4606 are separated by 3 nucleotides
Echvi_4603: Echvi_4603 - ATPase related to the helicase subunit of the Holliday junction resolvase, at 5,511,948 to 5,513,210
_4603
Echvi_4604: Echvi_4604 - Threonine aldolase, at 5,513,275 to 5,514,282
_4604
Echvi_4605: Echvi_4605 - Glycerophosphoryl diester phosphodiesterase, at 5,514,279 to 5,515,181
_4605
Echvi_4606: Echvi_4606 - Protein of unknown function (DUF2721)., at 5,515,185 to 5,515,649
_4606
Position (kb) 5513
5514
5515 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 5512.445 kb on - strand, within Echvi_4603 at 5512.504 kb on + strand, within Echvi_4603 at 5512.505 kb on - strand, within Echvi_4603 at 5512.528 kb on + strand, within Echvi_4603 at 5512.620 kb on + strand, within Echvi_4603 at 5512.681 kb on - strand, within Echvi_4603 at 5512.772 kb on + strand, within Echvi_4603 at 5512.840 kb on - strand, within Echvi_4603 at 5512.895 kb on + strand, within Echvi_4603 at 5512.896 kb on - strand, within Echvi_4603 at 5512.997 kb on + strand, within Echvi_4603 at 5513.003 kb on + strand, within Echvi_4603 at 5513.213 kb on - strand at 5513.213 kb on - strand at 5513.538 kb on + strand, within Echvi_4604 at 5513.538 kb on + strand, within Echvi_4604 at 5513.539 kb on - strand, within Echvi_4604 at 5513.555 kb on + strand, within Echvi_4604 at 5513.555 kb on + strand, within Echvi_4604 at 5513.592 kb on + strand, within Echvi_4604 at 5513.657 kb on - strand at 5513.843 kb on + strand, within Echvi_4604 at 5513.908 kb on + strand, within Echvi_4604 at 5513.909 kb on - strand, within Echvi_4604 at 5513.909 kb on - strand, within Echvi_4604 at 5513.909 kb on - strand, within Echvi_4604 at 5513.950 kb on + strand, within Echvi_4604 at 5513.950 kb on + strand, within Echvi_4604 at 5513.950 kb on + strand, within Echvi_4604 at 5514.026 kb on + strand, within Echvi_4604 at 5514.030 kb on + strand, within Echvi_4604 at 5514.205 kb on + strand at 5514.244 kb on - strand at 5514.267 kb on + strand at 5514.274 kb on + strand at 5514.275 kb on - strand at 5514.275 kb on - strand at 5514.275 kb on - strand at 5514.417 kb on + strand, within Echvi_4605 at 5514.417 kb on + strand, within Echvi_4605 at 5514.762 kb on - strand, within Echvi_4605 at 5514.818 kb on - strand, within Echvi_4605 at 5514.852 kb on - strand, within Echvi_4605 at 5514.866 kb on + strand, within Echvi_4605 at 5514.867 kb on - strand, within Echvi_4605 at 5514.945 kb on + strand, within Echvi_4605 at 5514.946 kb on - strand, within Echvi_4605 at 5514.946 kb on - strand, within Echvi_4605 at 5514.946 kb on - strand, within Echvi_4605 at 5514.949 kb on + strand, within Echvi_4605 at 5515.076 kb on + strand, within Echvi_4605 at 5515.186 kb on + strand at 5515.187 kb on - strand at 5515.193 kb on + strand at 5515.276 kb on - strand, within Echvi_4606
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.12 mg/ml remove 5,512,445 - Echvi_4603 0.39 +1.9 5,512,504 + Echvi_4603 0.44 +1.6 5,512,505 - Echvi_4603 0.44 +0.8 5,512,528 + Echvi_4603 0.46 -1.1 5,512,620 + Echvi_4603 0.53 -0.8 5,512,681 - Echvi_4603 0.58 +0.8 5,512,772 + Echvi_4603 0.65 -0.4 5,512,840 - Echvi_4603 0.71 +0.4 5,512,895 + Echvi_4603 0.75 +0.3 5,512,896 - Echvi_4603 0.75 -1.0 5,512,997 + Echvi_4603 0.83 +0.2 5,513,003 + Echvi_4603 0.84 -0.3 5,513,213 - +0.4 5,513,213 - -0.0 5,513,538 + Echvi_4604 0.26 -0.9 5,513,538 + Echvi_4604 0.26 -0.6 5,513,539 - Echvi_4604 0.26 -1.8 5,513,555 + Echvi_4604 0.28 -0.7 5,513,555 + Echvi_4604 0.28 -0.2 5,513,592 + Echvi_4604 0.31 -0.5 5,513,657 - +2.9 5,513,843 + Echvi_4604 0.56 -2.2 5,513,908 + Echvi_4604 0.63 +0.6 5,513,909 - Echvi_4604 0.63 -0.1 5,513,909 - Echvi_4604 0.63 -1.0 5,513,909 - Echvi_4604 0.63 -0.5 5,513,950 + Echvi_4604 0.67 +0.5 5,513,950 + Echvi_4604 0.67 +0.0 5,513,950 + Echvi_4604 0.67 -1.2 5,514,026 + Echvi_4604 0.75 -1.0 5,514,030 + Echvi_4604 0.75 -0.5 5,514,205 + -1.4 5,514,244 - -1.2 5,514,267 + -0.3 5,514,274 + +1.2 5,514,275 - -0.2 5,514,275 - +1.5 5,514,275 - +0.8 5,514,417 + Echvi_4605 0.15 -0.2 5,514,417 + Echvi_4605 0.15 -1.2 5,514,762 - Echvi_4605 0.53 -2.1 5,514,818 - Echvi_4605 0.60 +0.7 5,514,852 - Echvi_4605 0.63 -1.2 5,514,866 + Echvi_4605 0.65 +0.3 5,514,867 - Echvi_4605 0.65 +0.5 5,514,945 + Echvi_4605 0.74 +0.0 5,514,946 - Echvi_4605 0.74 -1.4 5,514,946 - Echvi_4605 0.74 +2.0 5,514,946 - Echvi_4605 0.74 +1.8 5,514,949 + Echvi_4605 0.74 -0.6 5,515,076 + Echvi_4605 0.88 -1.2 5,515,186 + +0.4 5,515,187 - +0.4 5,515,193 + -0.9 5,515,276 - Echvi_4606 0.20 +0.7
Or see this region's nucleotide sequence