Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4421

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
5,285,008	-		Echvi_4419	0.78	+0.3
5,285,008	-		Echvi_4419	0.78	+0.7
5,285,008	-		Echvi_4419	0.78	+0.1
5,285,008	-		Echvi_4419	0.78	+0.4
5,285,113	-		Echvi_4419	0.88	+0.2
5,285,119	+		Echvi_4419	0.88	-0.3
5,285,120	-		Echvi_4419	0.89	+0.1
5,285,183	-				+0.2
5,285,281	-				+0.7
5,285,298	-				+0.2
5,285,298	-				-1.7
5,285,320	+				-0.4
5,285,321	-				+0.7
5,285,321	-				-1.1
5,285,353	-				+0.3
5,285,474	+		Echvi_4420	0.22	-0.2
5,285,474	+		Echvi_4420	0.22	+0.2
5,285,475	-		Echvi_4420	0.22	+0.1
5,285,475	-		Echvi_4420	0.22	-0.4
5,285,583	+		Echvi_4420	0.38	-1.0
5,285,583	+		Echvi_4420	0.38	+1.7
5,285,583	+		Echvi_4420	0.38	-0.9
5,285,583	+		Echvi_4420	0.38	-0.3
5,285,588	+		Echvi_4420	0.39	+0.1
5,285,589	-		Echvi_4420	0.39	-1.9
5,285,700	+		Echvi_4420	0.56	-0.9
5,285,728	+		Echvi_4420	0.60	+0.2
5,285,753	-		Echvi_4420	0.64	-0.7
5,285,753	-		Echvi_4420	0.64	-0.2
5,285,857	-		Echvi_4420	0.79	+0.4
5,285,971	-				-0.4
5,285,971	-				+0.2
5,286,031	+				-1.3
5,286,073	+		Echvi_4421	0.21	-0.5
5,286,117	+		Echvi_4421	0.35	+1.0
5,286,121	+		Echvi_4421	0.36	+0.2
5,286,121	+		Echvi_4421	0.36	+0.6
5,286,121	+		Echvi_4421	0.36	-0.1
5,286,122	-		Echvi_4421	0.36	-0.0
5,286,122	-		Echvi_4421	0.36	+0.1
5,286,207	+		Echvi_4421	0.63	-1.0
5,286,208	-		Echvi_4421	0.63	+0.9
5,286,208	-		Echvi_4421	0.63	+0.5
5,286,247	+		Echvi_4421	0.76	-0.2
5,286,247	+		Echvi_4421	0.76	+0.1
5,286,248	-		Echvi_4421	0.76	+0.7
5,286,252	+		Echvi_4421	0.77	+1.4
5,286,322	+				+0.6
5,286,322	+				-1.4
5,286,322	+				-0.2
5,286,322	+				+0.5
5,286,322	+				-0.1
5,286,322	+				-0.4
5,286,322	+				+0.4
5,286,323	-				+0.1
5,286,323	-				+0.7
5,286,323	-				+0.1
5,286,323	-				+0.5
5,286,323	-				+0.2
5,286,323	-				-0.2
5,286,324	+				-0.3
5,286,325	-				-1.0
5,286,325	-				+1.4
5,286,325	-				-0.5
5,286,325	-				+0.9
5,286,325	-				+0.3
5,286,502	-				+2.0
5,286,550	-				-1.9
5,286,551	+				+0.5
5,286,551	+				+0.2
5,286,552	-				+0.4
5,286,555	+				-1.2
5,286,555	+				+1.2
5,286,603	+				-0.4
5,286,603	+				+1.5
5,286,691	+				+0.7
5,286,715	+				+0.2
5,286,715	+				-1.0
5,286,715	+				+0.7
5,286,754	+				+3.7
5,286,754	+				+0.5
5,286,766	+		Echvi_4422	0.10	+0.7
5,286,850	+		Echvi_4422	0.15	+0.7
5,286,922	+		Echvi_4422	0.19	+0.1
5,286,923	-		Echvi_4422	0.19	+0.7
5,286,967	-		Echvi_4422	0.21	+0.6
5,287,133	-		Echvi_4422	0.30	-0.3
5,287,157	+		Echvi_4422	0.31	-0.2