Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4411

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
5,273,991	-		Echvi_4410	0.42	-1.4
5,273,991	-		Echvi_4410	0.42	-0.2
5,274,042	+		Echvi_4410	0.45	+0.2
5,274,058	+		Echvi_4410	0.47	+2.0
5,274,128	+		Echvi_4410	0.52	-0.6
5,274,129	-		Echvi_4410	0.52	-0.7
5,274,161	+		Echvi_4410	0.55	+0.1
5,274,162	-		Echvi_4410	0.55	-2.3
5,274,198	-		Echvi_4410	0.57	-0.6
5,274,371	-		Echvi_4410	0.70	+0.5
5,274,375	+		Echvi_4410	0.71	-0.3
5,274,399	+		Echvi_4410	0.73	-0.4
5,274,420	+		Echvi_4410	0.74	+0.7
5,274,422	+		Echvi_4410	0.74	-0.5
5,274,422	+		Echvi_4410	0.74	-0.8
5,274,540	+		Echvi_4410	0.83	+0.2
5,274,585	-		Echvi_4410	0.87	+0.5
5,274,621	-		Echvi_4410	0.89	-0.7
5,274,727	+				+1.0
5,274,728	-				+1.3
5,274,728	-				+0.5
5,274,728	-				+0.8
5,274,728	-				-0.2
5,274,742	+				-0.7
5,274,743	-				+1.6
5,274,745	+				+0.4
5,274,750	+				+0.3
5,274,773	-				-0.4
5,274,783	+				-0.5
5,274,783	+				+0.8
5,274,784	-				-0.6
5,274,798	-				-1.4
5,274,799	+				-0.4
5,274,802	+				-0.3
5,274,802	+				-0.4
5,274,802	+				-0.4
5,274,802	+				+0.3
5,274,859	+				+1.6
5,275,061	-		Echvi_4411	0.15	+0.2
5,275,061	-		Echvi_4411	0.15	-0.9
5,275,061	-		Echvi_4411	0.15	-0.9
5,275,193	+		Echvi_4411	0.30	-2.4
5,275,194	-		Echvi_4411	0.30	-1.4
5,275,194	-		Echvi_4411	0.30	-1.3
5,275,194	-		Echvi_4411	0.30	+0.2
5,275,194	-		Echvi_4411	0.30	+1.2
5,275,288	-		Echvi_4411	0.41	-0.1
5,275,321	-		Echvi_4411	0.45	-0.1
5,275,352	+		Echvi_4411	0.48	+0.5
5,275,352	+		Echvi_4411	0.48	-0.2
5,275,352	+		Echvi_4411	0.48	+0.4
5,275,352	+		Echvi_4411	0.48	+0.5
5,275,356	+		Echvi_4411	0.49	-0.2
5,275,356	+		Echvi_4411	0.49	+0.2
5,275,357	-		Echvi_4411	0.49	-0.6
5,275,357	-		Echvi_4411	0.49	+1.9
5,275,357	-		Echvi_4411	0.49	-1.4
5,275,357	-		Echvi_4411	0.49	-1.8
5,275,357	-		Echvi_4411	0.49	-0.9
5,275,445	-		Echvi_4411	0.59	-0.1
5,275,465	+		Echvi_4411	0.61	+0.3
5,275,634	+		Echvi_4411	0.80	-0.6
5,275,634	+		Echvi_4411	0.80	+1.6
5,275,635	-		Echvi_4411	0.81	-0.7
5,275,703	+		Echvi_4411	0.88	+0.6
5,275,704	-		Echvi_4411	0.88	-0.4
5,275,704	-		Echvi_4411	0.88	+0.4
5,275,835	-				-0.7
5,275,849	+				-0.9
5,275,884	+				-0.7
5,275,959	+		Echvi_4412	0.10	+0.2
5,275,962	+		Echvi_4412	0.10	-0.5
5,275,962	+		Echvi_4412	0.10	+0.2
5,275,963	-		Echvi_4412	0.11	-0.1
5,275,968	+		Echvi_4412	0.11	-0.7
5,275,969	-		Echvi_4412	0.11	+0.2
5,275,977	-		Echvi_4412	0.11	-0.7
5,276,045	-		Echvi_4412	0.16	-0.2
5,276,053	+		Echvi_4412	0.16	+0.4
5,276,158	-		Echvi_4412	0.23	-1.5
5,276,198	-		Echvi_4412	0.26	-1.5
5,276,205	+		Echvi_4412	0.26	+0.4
5,276,283	-		Echvi_4412	0.31	-2.3
5,276,330	+		Echvi_4412	0.35	+1.7
5,276,451	+		Echvi_4412	0.42	+0.1
5,276,552	+		Echvi_4412	0.49	-2.0
5,276,770	-		Echvi_4412	0.63	-0.8