Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4319

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
5,159,533	+		Echvi_4318	0.19	-1.0
5,159,534	-		Echvi_4318	0.19	-1.1
5,159,621	+		Echvi_4318	0.27	-0.4
5,159,629	-		Echvi_4318	0.28	-0.9
5,159,695	+		Echvi_4318	0.34	+0.8
5,159,696	-		Echvi_4318	0.35	+2.7
5,159,742	+		Echvi_4318	0.39	+0.3
5,159,742	+		Echvi_4318	0.39	-0.5
5,159,743	-		Echvi_4318	0.39	-1.0
5,159,743	-		Echvi_4318	0.39	-1.3
5,159,743	-		Echvi_4318	0.39	+0.9
5,159,785	-		Echvi_4318	0.43	+0.4
5,159,903	-		Echvi_4318	0.55	+1.1
5,159,953	+		Echvi_4318	0.60	+0.9
5,159,953	+		Echvi_4318	0.60	+0.1
5,160,019	+		Echvi_4318	0.66	-0.3
5,160,019	+		Echvi_4318	0.66	+0.4
5,160,023	+		Echvi_4318	0.66	-0.8
5,160,023	+		Echvi_4318	0.66	+0.1
5,160,024	-		Echvi_4318	0.66	-2.0
5,160,036	+		Echvi_4318	0.68	-1.9
5,160,036	+		Echvi_4318	0.68	-0.8
5,160,037	-		Echvi_4318	0.68	+0.1
5,160,204	+		Echvi_4318	0.84	-0.2
5,160,205	-		Echvi_4318	0.84	+2.2
5,160,328	-				-0.2
5,160,328	-				-0.4
5,160,383	-				-1.8
5,160,434	+				-0.2
5,160,434	+				-0.0
5,160,435	-				+0.4
5,160,436	+				+0.6
5,160,445	-				+0.4
5,160,504	+				-0.4
5,160,504	+				+0.8
5,160,504	+				+2.6
5,160,528	-				+0.5
5,160,531	-				-1.8
5,160,562	+		Echvi_4319	0.15	+0.6
5,160,562	+		Echvi_4319	0.15	+0.0
5,160,562	+		Echvi_4319	0.15	-2.2
5,160,562	+		Echvi_4319	0.15	+1.1
5,160,562	+		Echvi_4319	0.15	+0.4
5,160,563	-		Echvi_4319	0.16	+0.0
5,160,620	+		Echvi_4319	0.29	-0.8
5,160,621	-		Echvi_4319	0.30	-0.2
5,160,621	-		Echvi_4319	0.30	+0.3
5,160,628	-		Echvi_4319	0.31	-0.5
5,160,730	+		Echvi_4319	0.56	+0.7
5,160,730	+		Echvi_4319	0.56	+0.2
5,160,730	+		Echvi_4319	0.56	+0.4
5,160,730	+		Echvi_4319	0.56	-0.5
5,160,730	+		Echvi_4319	0.56	+0.3
5,160,731	-		Echvi_4319	0.56	+0.6
5,160,731	-		Echvi_4319	0.56	+1.5
5,160,734	+		Echvi_4319	0.57	+0.3
5,160,735	-		Echvi_4319	0.57	+1.6
5,160,735	-		Echvi_4319	0.57	+1.3
5,160,748	-		Echvi_4319	0.60	+1.4
5,160,846	-		Echvi_4319	0.84	+1.3
5,160,846	-		Echvi_4319	0.84	+1.6
5,160,897	-				+0.1
5,160,914	-				+1.3
5,160,914	-				-0.8
5,160,914	-				+0.6
5,160,965	-				+0.9
5,160,984	+				-0.3
5,160,984	+				+0.8
5,160,984	+				+0.6
5,160,984	+				+0.1
5,160,984	+				-2.1
5,160,984	+				-0.4
5,160,984	+				-0.6
5,160,985	-				-0.7
5,160,985	-				-0.7
5,161,081	+				+0.3
5,161,155	+				-0.4
5,161,225	+				-0.4
5,161,241	+				-0.0
5,161,242	-				+0.4
5,161,301	+				-1.1
5,161,320	+				+0.2
5,161,320	+				+0.2
5,161,320	+				-0.3
5,161,321	-				+1.4
5,161,406	+				-0.3
5,161,406	+				-0.7
5,161,406	+				+0.4
5,161,407	-				+0.4
5,161,407	-				-1.0
5,161,407	-				-0.3
5,161,514	-				+1.1
5,161,516	+				-1.4
5,161,580	+				-0.2
5,161,654	+				+1.2
5,161,697	+				-0.9
5,161,782	+				-0.9
5,161,783	-				+0.4
5,161,783	-				+0.4
5,161,783	-				-0.3
5,161,804	+				-0.9
5,161,817	+				-0.9
5,161,818	-				-0.9
5,161,819	+				+0.9
5,161,820	-				-0.7
5,161,821	+				+1.5
5,161,867	+				-0.6
5,161,906	+		Echvi_4320	0.14	-0.4