Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4162

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
4,978,043	+				-1.8
4,978,049	-				+0.8
4,978,080	-				-0.3
4,978,127	+				+0.8
4,978,127	+				-1.5
4,978,143	-				+0.4
4,978,155	-		Echvi_4160	0.12	-0.2
4,978,340	+		Echvi_4160	0.52	-0.6
4,978,340	+		Echvi_4160	0.52	+0.1
4,978,340	+		Echvi_4160	0.52	+2.4
4,978,340	+		Echvi_4160	0.52	-0.4
4,978,340	+		Echvi_4160	0.52	+1.0
4,978,340	+		Echvi_4160	0.52	+0.9
4,978,340	+		Echvi_4160	0.52	-0.4
4,978,340	+		Echvi_4160	0.52	+1.4
4,978,341	-		Echvi_4160	0.52	-1.6
4,978,341	-		Echvi_4160	0.52	+0.9
4,978,341	-		Echvi_4160	0.52	-0.0
4,978,342	+		Echvi_4160	0.53	-0.3
4,978,342	+		Echvi_4160	0.53	-0.6
4,978,342	+		Echvi_4160	0.53	+0.6
4,978,342	+		Echvi_4160	0.53	-0.5
4,978,342	+		Echvi_4160	0.53	+1.6
4,978,343	-		Echvi_4160	0.53	-1.2
4,978,343	-		Echvi_4160	0.53	-1.5
4,978,343	-		Echvi_4160	0.53	-1.6
4,978,343	-		Echvi_4160	0.53	-0.8
4,978,343	-		Echvi_4160	0.53	+0.0
4,978,343	-		Echvi_4160	0.53	+0.0
4,978,343	-		Echvi_4160	0.53	+1.1
4,978,347	+		Echvi_4160	0.54	-0.3
4,978,350	-		Echvi_4160	0.54	-1.4
4,978,394	+		Echvi_4160	0.64	+0.4
4,978,450	+		Echvi_4160	0.76	+0.1
4,978,451	-		Echvi_4160	0.76	-1.4
4,978,567	-				-1.6
4,978,567	-				-2.6
4,978,571	+				-0.1
4,978,572	-				-0.7
4,978,584	-				+0.6
4,978,593	+				+1.2
4,978,594	-				-1.2
4,978,594	-				+0.1
4,978,594	-				-0.6
4,978,629	+		Echvi_4161	0.11	+1.6
4,978,633	+		Echvi_4161	0.12	+0.2
4,978,716	+		Echvi_4161	0.31	+0.1
4,979,024	-				-1.6
4,979,037	+				+0.7
4,979,309	+		Echvi_4162	0.44	-0.0
4,979,310	-		Echvi_4162	0.45	+0.3
4,979,319	-		Echvi_4162	0.46	-0.7
4,979,454	+		Echvi_4162	0.68	-0.2
4,979,454	+		Echvi_4162	0.68	-0.7
4,979,455	-		Echvi_4162	0.68	+1.0
4,979,455	-		Echvi_4162	0.68	-0.1
4,979,538	+		Echvi_4162	0.82	+0.1
4,979,539	-				+1.6
4,979,539	-		Echvi_4162	0.82	-0.6
4,979,539	-		Echvi_4162	0.82	+1.3
4,979,570	+		Echvi_4162	0.87	+0.0
4,979,570	+		Echvi_4162	0.87	+2.0
4,979,570	+		Echvi_4162	0.87	+2.2
4,979,571	-		Echvi_4162	0.88	-1.0
4,979,571	-		Echvi_4162	0.88	+0.2
4,979,571	-		Echvi_4162	0.88	+2.4
4,979,637	-				-0.6
4,979,657	+				-0.4
4,979,657	+				+0.3
4,979,658	-				-1.8
4,979,678	-				-1.0
4,979,750	-				-0.2
4,979,775	+				+0.0
4,979,775	+				+0.2
4,979,780	+				-1.0
4,979,830	-				-0.6
4,979,944	-				+0.2
4,980,009	-				+0.6
4,980,079	-				+0.2
4,980,091	-				+0.5
4,980,117	+				+0.6
4,980,118	-				+0.3
4,980,118	-				-0.4
4,980,120	+				+1.4
4,980,120	+				+1.3
4,980,120	+				-0.2
4,980,121	-				-0.7
4,980,176	+		Echvi_4164	0.11	+0.3
4,980,241	+		Echvi_4164	0.14	+0.3
4,980,247	-		Echvi_4164	0.14	-0.0
4,980,247	-		Echvi_4164	0.14	+1.6
4,980,289	+		Echvi_4164	0.16	-0.3
4,980,291	+		Echvi_4164	0.16	+0.7
4,980,291	+		Echvi_4164	0.16	+0.6
4,980,291	+		Echvi_4164	0.16	-0.5
4,980,299	+		Echvi_4164	0.17	+0.2
4,980,299	+		Echvi_4164	0.17	-1.3
4,980,300	-		Echvi_4164	0.17	+0.6
4,980,401	-		Echvi_4164	0.21	-1.2
4,980,426	+		Echvi_4164	0.22	+1.0
4,980,498	+		Echvi_4164	0.26	+1.0
4,980,508	-		Echvi_4164	0.26	+1.0
4,980,510	+		Echvi_4164	0.26	-0.3
4,980,510	+		Echvi_4164	0.26	+1.6
4,980,511	-		Echvi_4164	0.26	-0.2
4,980,512	+		Echvi_4164	0.26	-0.4
4,980,546	+		Echvi_4164	0.28	+0.3
4,980,575	+		Echvi_4164	0.29	+0.4
4,980,575	+		Echvi_4164	0.29	+1.0
4,980,599	+		Echvi_4164	0.30	+2.5
4,980,602	+		Echvi_4164	0.30	-0.4
4,980,603	-		Echvi_4164	0.30	-0.6
4,980,642	-		Echvi_4164	0.32	+1.4