Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3954

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
4,738,655	+		Echvi_3953	0.53	-2.1
4,738,655	+		Echvi_3953	0.53	-2.1
4,738,655	+		Echvi_3953	0.53	-0.1
4,738,655	+		Echvi_3953	0.53	+1.2
4,738,655	+		Echvi_3953	0.53	+0.7
4,738,655	+		Echvi_3953	0.53	+0.2
4,738,656	-		Echvi_3953	0.53	-1.1
4,738,656	-		Echvi_3953	0.53	-0.8
4,738,656	-		Echvi_3953	0.53	-1.8
4,738,682	+		Echvi_3953	0.56	+0.9
4,738,683	-		Echvi_3953	0.56	-2.6
4,738,731	+		Echvi_3953	0.61	-0.8
4,738,821	-		Echvi_3953	0.71	+0.6
4,738,824	+		Echvi_3953	0.72	-1.3
4,738,984	+		Echvi_3953	0.89	+0.2
4,739,001	+				-1.4
4,739,018	+				-0.1
4,739,019	-				-2.1
4,739,019	-				-1.2
4,739,082	+				-0.3
4,739,091	-				+0.8
4,739,155	-				-1.1
4,739,161	-				-0.8
4,739,165	+				-0.8
4,739,165	+				-0.5
4,739,198	+				-0.5
4,739,199	-				-2.4
4,739,209	+				+0.7
4,739,210	-				-1.8
4,739,210	-				+1.1
4,739,214	+				-0.2
4,739,214	+				-0.8
4,739,214	+				+3.2
4,739,215	-				+0.4
4,739,215	-				-0.0
4,739,215	-				+1.1
4,739,215	-				-1.8
4,739,227	+				+0.6
4,739,237	-				-0.0
4,739,257	+				+0.6
4,739,545	+				+0.0
4,739,545	+				-0.9
4,739,612	-		Echvi_3954	0.15	-1.7
4,739,614	-		Echvi_3954	0.15	-0.0
4,739,635	-		Echvi_3954	0.17	-0.8
4,739,730	-		Echvi_3954	0.24	-0.2
4,739,805	+		Echvi_3954	0.30	+0.3
4,739,820	+		Echvi_3954	0.31	+0.8
4,739,841	+		Echvi_3954	0.32	-0.0
4,739,841	+		Echvi_3954	0.32	-0.4
4,739,911	-		Echvi_3954	0.38	-0.6
4,739,911	-		Echvi_3954	0.38	+0.5
4,739,922	-		Echvi_3954	0.39	+1.3
4,739,949	-		Echvi_3954	0.41	-0.0
4,740,139	-		Echvi_3954	0.55	+0.4
4,740,291	+		Echvi_3954	0.67	+0.9
4,740,292	-		Echvi_3954	0.67	+0.6
4,740,292	-		Echvi_3954	0.67	+1.1
4,740,297	-		Echvi_3954	0.67	-0.3
4,740,456	-		Echvi_3954	0.79	+0.1
4,740,461	+		Echvi_3954	0.80	-1.3
4,740,461	+		Echvi_3954	0.80	-0.3
4,740,462	-		Echvi_3954	0.80	+1.2
4,740,603	+				+0.7
4,740,603	+				-0.5
4,740,603	+				-0.3
4,740,674	-				+0.9
4,740,674	-				+0.6
4,740,674	-				+1.1
4,740,747	-		Echvi_3955	0.12	+0.6
4,740,852	+		Echvi_3955	0.63	+1.0
4,740,898	-		Echvi_3955	0.85	+0.0
4,740,947	+				+0.6
4,740,948	-				+0.7
4,740,949	+				-0.4
4,741,001	-				-1.9
4,741,001	-				+1.6
4,741,001	-				+0.6
4,741,038	+				-0.5
4,741,038	+				+1.1
4,741,041	-				-0.4
4,741,061	-		Echvi_3956	0.12	-0.0
4,741,261	+		Echvi_3956	0.43	-1.0
4,741,262	-		Echvi_3956	0.44	-1.3
4,741,262	-		Echvi_3956	0.44	+0.4
4,741,262	-		Echvi_3956	0.44	-0.7
4,741,446	-		Echvi_3956	0.72	-0.7
4,741,560	+		Echvi_3956	0.90	+0.1
4,741,650	-				-0.2
4,741,650	-				-0.2
4,741,652	-				-0.3
4,741,655	+				-1.7
4,741,655	+				-0.4
4,741,655	+				-0.7
4,741,655	+				-0.4
4,741,656	-				-0.6
4,741,656	-				+1.0
4,741,656	-				+0.0
4,741,656	-				+0.2
4,741,656	-				-0.1
4,741,656	-				-0.3