Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3717

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
4,420,954	-				-0.5
4,420,967	+				+0.5
4,420,967	+				-0.2
4,421,034	-				-0.6
4,421,040	-				+0.0
4,421,067	+				-1.0
4,421,089	+				-1.5
4,421,206	+				-0.3
4,421,416	-		Echvi_3716	0.34	-0.0
4,421,779	-		Echvi_3716	0.81	+0.5
4,421,899	+				+0.2
4,421,900	-				-0.0
4,421,942	-				-2.2
4,421,952	-				-3.8
4,421,953	+				-3.4
4,421,953	+				-1.6
4,421,954	-				-3.2
4,421,954	-				-3.0
4,421,955	+				-1.0
4,421,955	+				-2.1
4,421,962	+				-0.6
4,422,033	-				-4.3
4,422,046	+				-1.0
4,422,046	+				-3.7
4,422,079	-				-4.1
4,422,106	+				-2.6
4,422,106	+				+0.4
4,422,150	-				-3.1
4,422,150	-				-2.5
4,422,154	+				-2.5
4,422,155	-				-1.9
4,422,155	-				-3.0
4,422,170	+				-0.0
4,422,170	+				-2.0
4,422,171	-				-1.7
4,422,171	-				-1.6
4,422,226	+		Echvi_3717	0.12	-4.7
4,422,278	+		Echvi_3717	0.14	-1.4
4,422,279	-		Echvi_3717	0.14	-1.5
4,422,282	-		Echvi_3717	0.14	-3.2
4,422,287	+		Echvi_3717	0.15	-2.5
4,422,326	+		Echvi_3717	0.16	-2.0
4,422,341	-		Echvi_3717	0.17	-2.5
4,422,516	-		Echvi_3717	0.24	-2.9
4,422,557	-		Echvi_3717	0.26	-2.3
4,422,557	-		Echvi_3717	0.26	-1.7
4,422,557	-		Echvi_3717	0.26	-3.1
4,422,601	+		Echvi_3717	0.28	-2.4
4,422,602	-		Echvi_3717	0.28	-2.8
4,422,680	+		Echvi_3717	0.31	-3.8
4,422,683	-		Echvi_3717	0.31	-2.4
4,422,698	+		Echvi_3717	0.32	-4.0
4,422,698	+		Echvi_3717	0.32	-2.2
4,422,698	+		Echvi_3717	0.32	-0.9
4,422,698	+		Echvi_3717	0.32	-2.9
4,422,699	-		Echvi_3717	0.32	-1.6
4,422,707	+		Echvi_3717	0.32	-2.0
4,422,708	-		Echvi_3717	0.32	-1.8
4,422,708	-		Echvi_3717	0.32	-3.0
4,422,870	-		Echvi_3717	0.39	-1.9
4,422,884	+		Echvi_3717	0.39	-3.5
4,422,884	+		Echvi_3717	0.39	-0.5
4,422,884	+		Echvi_3717	0.39	-1.2
4,422,885	-		Echvi_3717	0.39	-3.2
4,422,885	-		Echvi_3717	0.39	-1.6
4,422,886	+		Echvi_3717	0.39	-2.9
4,422,934	-		Echvi_3717	0.41	-1.6
4,422,956	+		Echvi_3717	0.42	-1.6
4,422,957	-		Echvi_3717	0.42	-1.5
4,422,957	-		Echvi_3717	0.42	-2.4
4,423,118	-		Echvi_3717	0.49	-1.0
4,423,202	-		Echvi_3717	0.52	-1.3
4,423,255	-		Echvi_3717	0.55	-1.4
4,423,381	+		Echvi_3717	0.60	-3.9
4,423,382	-		Echvi_3717	0.60	-2.5
4,423,382	-		Echvi_3717	0.60	-2.3
4,423,382	-		Echvi_3717	0.60	-1.5
4,423,385	+		Echvi_3717	0.60	-1.8
4,423,385	+		Echvi_3717	0.60	-0.5
4,423,385	+		Echvi_3717	0.60	-2.5
4,423,386	-		Echvi_3717	0.60	-0.0
4,423,386	-		Echvi_3717	0.60	-2.4
4,423,386	-		Echvi_3717	0.60	-2.6
4,423,386	-		Echvi_3717	0.60	-1.5
4,423,386	-		Echvi_3717	0.60	-3.5
4,423,386	-		Echvi_3717	0.60	-3.0
4,423,386	-		Echvi_3717	0.60	-2.2
4,423,403	+		Echvi_3717	0.61	-0.8
4,423,439	-		Echvi_3717	0.62	-2.0
4,423,628	-		Echvi_3717	0.70	-3.4
4,423,707	+		Echvi_3717	0.73	+1.5
4,423,707	+		Echvi_3717	0.73	-2.5
4,423,708	-		Echvi_3717	0.73	-2.7
4,423,708	-		Echvi_3717	0.73	-3.1
4,423,745	+				+0.5
4,423,745	+		Echvi_3717	0.75	-2.5
4,423,746	-		Echvi_3717	0.75	-2.9
4,423,784	+		Echvi_3717	0.76	-2.7
4,423,784	+		Echvi_3717	0.76	-1.8
4,423,784	+		Echvi_3717	0.76	-2.5
4,423,784	+		Echvi_3717	0.76	-4.7
4,423,784	+		Echvi_3717	0.76	-2.3
4,423,784	+		Echvi_3717	0.76	-3.0
4,423,784	+		Echvi_3717	0.76	-4.5
4,423,784	+		Echvi_3717	0.76	-1.8
4,423,785	-		Echvi_3717	0.76	-2.6
4,423,785	-		Echvi_3717	0.76	-3.0
4,423,785	-		Echvi_3717	0.76	-1.4
4,423,787	-		Echvi_3717	0.77	-1.3
4,423,787	-		Echvi_3717	0.77	-1.8
4,423,787	-		Echvi_3717	0.77	-2.6
4,423,883	+		Echvi_3717	0.81	-2.0
4,423,910	-		Echvi_3717	0.82	-1.8
4,424,017	-		Echvi_3717	0.86	-3.3
4,424,100	+		Echvi_3717	0.89	-1.5
4,424,101	-		Echvi_3717	0.90	-1.2
4,424,322	+				-3.3
4,424,327	-				-2.3
4,424,335	+				-3.5
4,424,336	-				-2.2
4,424,458	+				-0.9
4,424,543	+				+0.3
4,424,555	+				-0.4