Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3217

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
3,817,547	+				-0.7
3,817,577	-				+1.1
3,817,626	-				-0.3
3,817,627	+				+0.1
3,817,659	+				-1.0
3,817,667	-				+2.0
3,817,808	+		Echvi_3216	0.24	-1.8
3,817,808	+		Echvi_3216	0.24	-1.5
3,817,809	-		Echvi_3216	0.24	+0.4
3,817,880	-		Echvi_3216	0.36	+0.6
3,817,880	-		Echvi_3216	0.36	-1.4
3,817,880	-		Echvi_3216	0.36	+0.1
3,817,924	+		Echvi_3216	0.43	+0.1
3,817,926	+		Echvi_3216	0.43	-0.0
3,817,926	+		Echvi_3216	0.43	-0.3
3,817,956	+		Echvi_3216	0.48	+0.1
3,817,956	+		Echvi_3216	0.48	-1.3
3,818,128	+		Echvi_3216	0.77	-0.4
3,818,149	-		Echvi_3216	0.80	+1.0
3,818,254	-				-1.0
3,818,362	+				+2.4
3,818,362	+				-1.0
3,818,365	+				+0.5
3,818,378	+				+0.3
3,818,390	-				-0.7
3,818,425	-				-0.3
3,818,444	-				-0.1
3,818,506	+				-0.8
3,818,546	+				-0.6
3,818,546	+				-0.4
3,818,547	-				+0.7
3,818,576	+				-0.4
3,818,577	-				+0.7
3,818,591	+				-0.2
3,818,592	-				+1.0
3,818,624	+		Echvi_3217	0.10	+0.0
3,818,702	+		Echvi_3217	0.16	-0.5
3,818,769	+		Echvi_3217	0.22	-1.0
3,818,806	+		Echvi_3217	0.25	-0.1
3,818,813	+		Echvi_3217	0.25	+0.3
3,818,872	+		Echvi_3217	0.30	-0.2
3,818,872	+		Echvi_3217	0.30	-0.3
3,818,872	+		Echvi_3217	0.30	-1.0
3,818,939	-		Echvi_3217	0.35	-1.6
3,818,943	+		Echvi_3217	0.35	-0.7
3,818,943	+		Echvi_3217	0.35	+1.6
3,818,943	+		Echvi_3217	0.35	-0.2
3,818,945	+		Echvi_3217	0.36	+1.4
3,818,945	+		Echvi_3217	0.36	-1.7
3,818,945	+		Echvi_3217	0.36	+0.6
3,818,945	+		Echvi_3217	0.36	+0.1
3,818,946	-		Echvi_3217	0.36	-1.0
3,818,981	+		Echvi_3217	0.38	-1.4
3,818,995	-		Echvi_3217	0.39	-0.3
3,819,049	+		Echvi_3217	0.44	+0.7
3,819,049	+		Echvi_3217	0.44	+1.1
3,819,063	-		Echvi_3217	0.45	-0.3
3,819,148	+		Echvi_3217	0.52	-0.5
3,819,181	-		Echvi_3217	0.54	-1.0
3,819,181	-		Echvi_3217	0.54	+1.0
3,819,181	-		Echvi_3217	0.54	+0.2
3,819,221	+		Echvi_3217	0.57	-1.0
3,819,230	-		Echvi_3217	0.58	-0.2
3,819,230	-		Echvi_3217	0.58	-0.5
3,819,301	+		Echvi_3217	0.64	+0.1
3,819,301	+		Echvi_3217	0.64	-0.3
3,819,302	-		Echvi_3217	0.64	+0.6
3,819,383	+		Echvi_3217	0.70	-2.0
3,819,383	+		Echvi_3217	0.70	-1.6
3,819,383	+		Echvi_3217	0.70	-0.5
3,819,383	+		Echvi_3217	0.70	+0.3
3,819,383	+		Echvi_3217	0.70	+0.2
3,819,383	+		Echvi_3217	0.70	+0.2
3,819,383	+		Echvi_3217	0.70	-0.7
3,819,384	-		Echvi_3217	0.70	-1.3
3,819,384	-		Echvi_3217	0.70	-0.8
3,819,395	-		Echvi_3217	0.71	-0.5
3,819,418	-		Echvi_3217	0.73	+0.3
3,819,429	-		Echvi_3217	0.74	-0.4
3,819,429	-		Echvi_3217	0.74	-0.1
3,819,449	-		Echvi_3217	0.75	+0.6
3,819,449	-		Echvi_3217	0.75	-0.5
3,819,458	+		Echvi_3217	0.76	+0.7
3,819,518	-		Echvi_3217	0.81	-0.3
3,819,612	+		Echvi_3217	0.88	+0.4
3,819,613	-		Echvi_3217	0.88	-0.7
3,819,634	+		Echvi_3217	0.90	-0.6
3,819,748	-				-0.8
3,819,836	+		Echvi_3218	0.10	-0.0
3,819,836	+		Echvi_3218	0.10	+0.2
3,819,836	+		Echvi_3218	0.10	-0.5
3,819,836	+		Echvi_3218	0.10	+0.7
3,819,848	+		Echvi_3218	0.12	-0.1
3,819,848	+		Echvi_3218	0.12	-1.0
3,819,938	+		Echvi_3218	0.28	+3.0
3,819,938	+		Echvi_3218	0.28	-0.7
3,820,042	+		Echvi_3218	0.46	+0.3
3,820,043	-		Echvi_3218	0.46	-0.4
3,820,069	+		Echvi_3218	0.51	-0.4
3,820,071	+		Echvi_3218	0.51	-0.6
3,820,072	-		Echvi_3218	0.51	-0.4
3,820,115	+		Echvi_3218	0.59	-0.4
3,820,174	+		Echvi_3218	0.69	-0.6
3,820,174	+		Echvi_3218	0.69	-0.6
3,820,175	-		Echvi_3218	0.69	-0.4
3,820,221	-		Echvi_3218	0.77	+0.9
3,820,269	+		Echvi_3218	0.85	-0.6
3,820,326	+				-2.8
3,820,326	+				+0.0
3,820,358	+				-0.0
3,820,358	+				+0.3
3,820,358	+				+0.4
3,820,358	+				-0.4
3,820,358	+				-1.0
3,820,399	+				+0.7
3,820,399	+				-0.2
3,820,399	+				-0.3
3,820,399	+				+0.7
3,820,399	+				-0.7
3,820,400	-				-0.6
3,820,497	+		Echvi_3219	0.13	+0.1
3,820,588	-		Echvi_3219	0.22	-0.8
3,820,631	-		Echvi_3219	0.26	-0.4
3,820,753	-				+1.6