Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2617

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
3,102,978	+		Echvi_2616	0.21	-0.0
3,102,978	+		Echvi_2616	0.21	-0.5
3,102,979	-		Echvi_2616	0.21	+0.9
3,102,979	-		Echvi_2616	0.21	+0.5
3,102,979	-		Echvi_2616	0.21	-0.3
3,102,979	-		Echvi_2616	0.21	-1.2
3,102,982	-		Echvi_2616	0.21	+0.0
3,102,985	-		Echvi_2616	0.22	+1.8
3,103,151	+		Echvi_2616	0.36	-0.6
3,103,152	-		Echvi_2616	0.36	-1.0
3,103,152	-		Echvi_2616	0.36	+2.3
3,103,152	-		Echvi_2616	0.36	+0.9
3,103,160	-		Echvi_2616	0.37	-1.0
3,103,191	+		Echvi_2616	0.39	-0.8
3,103,191	+		Echvi_2616	0.39	+0.4
3,103,192	-		Echvi_2616	0.39	-0.0
3,103,192	-		Echvi_2616	0.39	+1.3
3,103,192	-		Echvi_2616	0.39	-1.1
3,103,192	-		Echvi_2616	0.39	-0.4
3,103,217	+		Echvi_2616	0.42	+2.6
3,103,268	-		Echvi_2616	0.46	+0.8
3,103,283	+		Echvi_2616	0.47	-0.8
3,103,297	-		Echvi_2616	0.48	+0.4
3,103,309	+		Echvi_2616	0.49	-0.3
3,103,348	-		Echvi_2616	0.53	+0.2
3,103,365	+		Echvi_2616	0.54	-0.2
3,103,431	-		Echvi_2616	0.60	-1.6
3,103,439	+		Echvi_2616	0.61	-0.2
3,103,440	-		Echvi_2616	0.61	+0.2
3,103,481	+		Echvi_2616	0.64	-1.4
3,103,481	+		Echvi_2616	0.64	+1.6
3,103,481	+		Echvi_2616	0.64	-0.2
3,103,482	-		Echvi_2616	0.64	-0.3
3,103,482	-		Echvi_2616	0.64	+0.3
3,103,482	-		Echvi_2616	0.64	-0.2
3,103,512	+		Echvi_2616	0.67	+0.2
3,103,512	+		Echvi_2616	0.67	+0.1
3,103,587	+		Echvi_2616	0.73	+1.4
3,103,589	+		Echvi_2616	0.74	-0.7
3,103,589	+		Echvi_2616	0.74	+0.6
3,103,602	-		Echvi_2616	0.75	+0.6
3,103,605	+		Echvi_2616	0.75	+1.0
3,103,605	+		Echvi_2616	0.75	+0.0
3,103,606	-		Echvi_2616	0.75	-0.0
3,103,606	-		Echvi_2616	0.75	-0.7
3,103,619	-		Echvi_2616	0.76	+0.5
3,103,619	-		Echvi_2616	0.76	-0.5
3,103,629	-		Echvi_2616	0.77	-0.5
3,103,682	+		Echvi_2616	0.82	-0.3
3,103,683	-		Echvi_2616	0.82	+0.1
3,103,684	+		Echvi_2616	0.82	-0.0
3,103,715	+		Echvi_2616	0.84	+0.3
3,103,715	+		Echvi_2616	0.84	-0.2
3,103,716	-		Echvi_2616	0.84	-0.1
3,103,716	-		Echvi_2616	0.84	-0.2
3,103,730	+		Echvi_2616	0.86	-0.4
3,103,748	+		Echvi_2616	0.87	-0.7
3,103,748	+		Echvi_2616	0.87	+0.3
3,103,749	-		Echvi_2616	0.87	-0.1
3,103,765	+		Echvi_2616	0.89	+0.8
3,103,766	-		Echvi_2616	0.89	-0.2
3,103,821	+				+0.2
3,103,821	+				-1.3
3,103,821	+				-0.2
3,103,845	+				-1.0
3,103,849	+				-0.7
3,103,849	+				-0.4
3,103,850	-				-0.5
3,103,850	-				-1.4
3,103,850	-				+0.4
3,103,850	-				-1.2
3,103,850	-				+0.6
3,103,850	-				-0.9
3,103,850	-				-0.4
3,103,852	+				-0.6
3,103,852	+				-0.0
3,103,852	+				-1.0
3,103,852	+				+0.5
3,103,853	-				+0.3
3,103,855	+				-0.4
3,103,855	+				+0.2
3,103,856	-				-0.1
3,103,859	-				+1.6
3,103,961	-				+3.2
3,104,082	+		Echvi_2617	0.12	-1.1
3,104,083	-		Echvi_2617	0.12	-0.4
3,104,246	-		Echvi_2617	0.29	-0.7
3,104,246	-		Echvi_2617	0.29	-0.1
3,104,476	-		Echvi_2617	0.53	-0.8
3,104,480	-		Echvi_2617	0.53	+0.1
3,104,480	-		Echvi_2617	0.53	-1.1
3,104,553	-		Echvi_2617	0.61	-0.7
3,104,603	+		Echvi_2617	0.66	+0.8
3,104,604	-		Echvi_2617	0.66	-0.7
3,104,651	-		Echvi_2617	0.71	-1.1
3,104,690	+		Echvi_2617	0.75	-1.4
3,104,690	+		Echvi_2617	0.75	-0.3
3,104,881	-				+2.0
3,104,919	+				+0.6
3,104,949	+				-0.2
3,104,962	+				-0.0
3,104,983	-				-1.4
3,104,983	-				+1.0
3,104,991	-				+0.1
3,104,992	+				+0.2
3,104,992	+				-0.7
3,104,992	+				-1.5
3,104,993	-				+1.6
3,105,041	+				+1.0
3,105,042	-				-0.7
3,105,042	-				+0.3
3,105,261	-				-1.1
3,105,295	-				+0.6
3,105,469	-		Echvi_2618	0.19	-1.2
3,105,475	+		Echvi_2618	0.20	+1.0
3,105,481	+		Echvi_2618	0.21	+1.6
3,105,643	+		Echvi_2618	0.42	-0.7
3,105,753	-		Echvi_2618	0.57	+0.3
3,105,758	-		Echvi_2618	0.58	+0.1
3,105,758	-		Echvi_2618	0.58	-0.0
3,105,766	+		Echvi_2618	0.59	+1.0
3,105,792	-		Echvi_2618	0.62	-0.3
3,105,864	+		Echvi_2618	0.72	-0.0
3,105,915	-		Echvi_2618	0.79	+1.1
3,105,915	-		Echvi_2618	0.79	-0.4
3,105,930	-		Echvi_2618	0.81	+0.8
3,105,930	-		Echvi_2618	0.81	-1.0
3,105,930	-		Echvi_2618	0.81	+0.8
3,105,931	+		Echvi_2618	0.81	-1.3