Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2552

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
3,027,399	+		Echvi_2551	0.64	-0.5
3,027,422	-		Echvi_2551	0.65	+1.3
3,027,548	-		Echvi_2551	0.71	+0.7
3,027,548	-		Echvi_2551	0.71	-0.5
3,027,575	-		Echvi_2551	0.72	-0.2
3,027,622	-		Echvi_2551	0.74	+0.7
3,027,641	-		Echvi_2551	0.75	-0.7
3,027,642	+		Echvi_2551	0.75	+0.4
3,027,663	+		Echvi_2551	0.76	+0.1
3,027,663	+		Echvi_2551	0.76	-0.6
3,027,663	+		Echvi_2551	0.76	-0.6
3,027,664	-		Echvi_2551	0.76	-0.0
3,027,664	-		Echvi_2551	0.76	+0.8
3,027,664	-		Echvi_2551	0.76	-0.1
3,027,664	-		Echvi_2551	0.76	-0.3
3,027,664	-		Echvi_2551	0.76	-0.8
3,027,705	+		Echvi_2551	0.78	+0.2
3,027,706	-		Echvi_2551	0.78	+1.1
3,027,706	-		Echvi_2551	0.78	+1.1
3,027,753	+		Echvi_2551	0.80	+0.7
3,027,753	+		Echvi_2551	0.80	+0.6
3,027,753	+		Echvi_2551	0.80	+0.4
3,027,754	-		Echvi_2551	0.80	-0.4
3,027,754	-		Echvi_2551	0.80	+1.1
3,027,754	-		Echvi_2551	0.80	+0.7
3,027,754	-		Echvi_2551	0.80	+0.7
3,027,766	+		Echvi_2551	0.80	-2.9
3,027,766	+		Echvi_2551	0.80	-1.0
3,027,792	+		Echvi_2551	0.82	-0.6
3,027,792	+		Echvi_2551	0.82	+0.1
3,027,818	+		Echvi_2551	0.83	-0.6
3,027,819	-		Echvi_2551	0.83	-0.2
3,027,819	-		Echvi_2551	0.83	+0.6
3,027,819	-		Echvi_2551	0.83	+1.3
3,027,819	-		Echvi_2551	0.83	-0.1
3,027,853	-		Echvi_2551	0.84	-1.5
3,027,853	-		Echvi_2551	0.84	+2.6
3,027,897	+		Echvi_2551	0.86	+1.0
3,027,897	+		Echvi_2551	0.86	-1.0
3,027,913	-		Echvi_2551	0.87	-1.1
3,027,916	-		Echvi_2551	0.87	-0.9
3,027,932	+		Echvi_2551	0.88	-0.5
3,027,932	+		Echvi_2551	0.88	-1.1
3,027,933	-		Echvi_2551	0.88	+1.0
3,027,938	-		Echvi_2551	0.88	+0.2
3,027,949	+		Echvi_2551	0.88	-0.6
3,027,949	+		Echvi_2551	0.88	-0.1
3,028,032	+				+0.6
3,028,032	+				-0.1
3,028,032	+				+1.1
3,028,049	-				-1.2
3,028,116	-				-0.3
3,028,129	+				+2.6
3,028,146	-				+0.3
3,028,231	-				+0.1
3,028,234	-				-0.3
3,028,258	+				-0.4
3,028,258	+				+0.6
3,028,259	-				+2.0
3,028,259	-				-0.2
3,028,259	-				-0.1
3,028,259	-				-0.2
3,028,259	-				-0.0
3,028,260	+				+1.1
3,028,260	+				-1.0
3,028,260	+				-0.7
3,028,260	+				+0.2
3,028,261	-				-0.8
3,028,261	-				-0.0
3,028,306	-				-0.2
3,028,315	-				+0.5
3,028,315	-				-0.0
3,028,315	-				-0.8
3,028,330	-				-0.4
3,028,333	-				-0.6
3,028,333	-				-0.0
3,028,333	-				+0.2
3,028,358	+				+1.6
3,028,361	+				-0.6
3,028,361	+				+0.1
3,028,451	-		Echvi_2552	0.14	-0.2
3,028,473	-		Echvi_2552	0.17	-0.2
3,028,521	-		Echvi_2552	0.25	+0.4
3,028,524	-		Echvi_2552	0.26	+0.7
3,028,524	-		Echvi_2552	0.26	-0.6
3,028,525	+		Echvi_2552	0.26	+0.0
3,028,529	-		Echvi_2552	0.26	-0.3
3,028,548	+		Echvi_2552	0.30	+0.1
3,028,548	+		Echvi_2552	0.30	-0.5
3,028,593	+		Echvi_2552	0.37	-0.4
3,028,602	+		Echvi_2552	0.38	-0.3
3,028,662	-		Echvi_2552	0.48	+0.1
3,028,663	+		Echvi_2552	0.48	-1.2
3,028,692	-		Echvi_2552	0.53	-0.2
3,028,692	-		Echvi_2552	0.53	-1.1
3,028,692	-		Echvi_2552	0.53	+2.9
3,028,694	+		Echvi_2552	0.54	+1.1
3,028,694	+		Echvi_2552	0.54	-2.3
3,028,694	+		Echvi_2552	0.54	-0.2
3,028,695	-		Echvi_2552	0.54	+0.8
3,028,695	-		Echvi_2552	0.54	-1.2
3,028,715	-		Echvi_2552	0.57	+0.6
3,028,715	-		Echvi_2552	0.57	+1.1
3,028,730	-		Echvi_2552	0.59	-0.1
3,028,736	-		Echvi_2552	0.60	-0.0
3,028,736	-		Echvi_2552	0.60	-0.6
3,028,737	+		Echvi_2552	0.61	-0.0
3,028,738	-		Echvi_2552	0.61	-1.4
3,028,822	+		Echvi_2552	0.75	+0.0
3,028,834	+		Echvi_2552	0.77	+0.4
3,028,842	-		Echvi_2552	0.78	-1.8
3,028,884	+		Echvi_2552	0.85	+0.6
3,028,885	-		Echvi_2552	0.85	+0.0
3,028,885	-		Echvi_2552	0.85	-0.8
3,028,948	-				-0.9
3,028,948	-				-0.4
3,028,948	-				+0.2
3,029,110	+				-0.4
3,029,302	+		Echvi_2553	0.51	-0.3
3,029,302	+		Echvi_2553	0.51	+1.6
3,029,303	-		Echvi_2553	0.51	-0.8
3,029,530	-				-0.4
3,029,728	+		Echvi_2554	0.59	+1.1
3,029,740	+		Echvi_2554	0.64	-0.4
3,029,741	-		Echvi_2554	0.64	-0.4
3,029,754	+		Echvi_2554	0.69	+1.6
3,029,812	-				-0.1
3,029,846	+				-0.9
3,029,850	+				-0.2
3,029,853	+				+0.3
3,029,854	-				+0.9
3,029,859	+				-0.9
3,029,860	-				-0.2
3,029,860	-				+1.3
3,029,895	+				-0.6
3,029,896	-				-0.4
3,029,910	+				+0.6
3,029,946	-				-0.9
3,029,947	+				-1.3
3,029,948	-				-0.2
3,029,960	+				+0.7