Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2207

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
2,633,930	+		Echvi_2205	0.76	-0.4
2,633,930	+		Echvi_2205	0.76	-2.5
2,633,930	+		Echvi_2205	0.76	+1.4
2,633,931	-		Echvi_2205	0.76	-1.1
2,633,931	-		Echvi_2205	0.76	-0.0
2,633,934	+		Echvi_2205	0.77	+0.1
2,633,934	+		Echvi_2205	0.77	+0.0
2,633,935	-		Echvi_2205	0.77	+1.0
2,633,935	-		Echvi_2205	0.77	+0.9
2,633,935	-		Echvi_2205	0.77	-0.4
2,633,935	-		Echvi_2205	0.77	+0.3
2,633,935	-		Echvi_2205	0.77	-0.3
2,633,935	-		Echvi_2205	0.77	+0.5
2,633,941	+		Echvi_2205	0.77	-0.0
2,634,181	+		Echvi_2205	0.85	+1.9
2,634,243	+		Echvi_2205	0.88	-1.3
2,634,243	+		Echvi_2205	0.88	+0.3
2,634,244	-		Echvi_2205	0.88	+0.9
2,634,253	+		Echvi_2205	0.88	+0.6
2,634,316	-				+0.3
2,634,394	-				-0.1
2,634,551	+				-1.8
2,634,552	-				+0.3
2,634,942	-				+0.3
2,634,952	-				-0.5
2,635,029	-		Echvi_2207	0.17	-2.0
2,635,029	-		Echvi_2207	0.17	-1.2
2,635,031	-		Echvi_2207	0.17	-0.4
2,635,031	-		Echvi_2207	0.17	+1.2
2,635,031	-		Echvi_2207	0.17	-1.0
2,635,047	-		Echvi_2207	0.19	-0.7
2,635,076	-		Echvi_2207	0.23	-1.7
2,635,140	-		Echvi_2207	0.32	-2.1
2,635,415	-		Echvi_2207	0.70	-0.3
2,635,431	+		Echvi_2207	0.72	-0.6
2,635,432	-		Echvi_2207	0.72	+0.0
2,635,456	-		Echvi_2207	0.76	-0.6
2,635,464	-		Echvi_2207	0.77	+1.2
2,635,475	+		Echvi_2207	0.78	-0.5
2,635,476	-		Echvi_2207	0.79	+0.4
2,635,476	-		Echvi_2207	0.79	-0.1
2,635,600	+				-1.0
2,635,600	+				-2.2
2,635,631	+				+0.6
2,635,631	+				+1.5
2,635,631	+				-0.2
2,635,632	-				-0.5
2,635,632	-				+3.6
2,635,676	+				-0.3
2,635,762	-		Echvi_2208	0.33	-1.0
2,635,771	+		Echvi_2208	0.35	-0.2
2,635,771	+		Echvi_2208	0.35	+1.2
2,635,772	-		Echvi_2208	0.36	+0.2
2,635,772	-		Echvi_2208	0.36	-0.7
2,635,827	-		Echvi_2208	0.51	-0.5
2,635,912	+		Echvi_2208	0.73	+0.0
2,635,947	-		Echvi_2208	0.83	-0.1
2,635,978	+				+0.8
2,635,989	-				+0.1
2,636,024	+				-0.7
2,636,024	+				-0.3
2,636,025	-				-0.1
2,636,164	-				-0.8
2,636,287	-		Echvi_2209	0.11	+0.6
2,636,337	+		Echvi_2209	0.15	-0.1
2,636,338	-		Echvi_2209	0.15	+1.2
2,636,338	-		Echvi_2209	0.15	+0.5
2,636,340	-		Echvi_2209	0.15	-0.4
2,636,340	-		Echvi_2209	0.15	+0.4
2,636,340	-		Echvi_2209	0.15	-0.2
2,636,423	-		Echvi_2209	0.21	-0.1
2,636,551	-		Echvi_2209	0.30	-0.3
2,636,551	-		Echvi_2209	0.30	-0.3
2,636,620	-		Echvi_2209	0.35	-0.4
2,636,620	-		Echvi_2209	0.35	+0.4