Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1551

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
1,778,348	+		Echvi_1550	0.17	-1.8
1,778,348	+		Echvi_1550	0.17	-2.8
1,778,416	+		Echvi_1550	0.24	-2.9
1,778,417	-		Echvi_1550	0.24	+0.3
1,778,417	-		Echvi_1550	0.24	+1.2
1,778,417	-		Echvi_1550	0.24	-0.6
1,778,417	-		Echvi_1550	0.24	+1.1
1,778,417	-		Echvi_1550	0.24	+0.4
1,778,418	+		Echvi_1550	0.24	-2.0
1,778,419	-		Echvi_1550	0.24	+0.5
1,778,421	-		Echvi_1550	0.24	-0.3
1,778,421	-		Echvi_1550	0.24	+0.2
1,778,421	-		Echvi_1550	0.24	-0.0
1,778,510	-		Echvi_1550	0.33	-1.7
1,778,544	+		Echvi_1550	0.36	-1.2
1,778,700	+		Echvi_1550	0.51	-1.6
1,778,701	-		Echvi_1550	0.51	+1.4
1,778,702	+		Echvi_1550	0.51	-1.7
1,778,773	+		Echvi_1550	0.58	-1.6
1,778,779	+		Echvi_1550	0.58	-2.5
1,778,779	+		Echvi_1550	0.58	-1.2
1,778,779	+		Echvi_1550	0.58	-2.7
1,778,835	-		Echvi_1550	0.64	+0.4
1,778,835	-		Echvi_1550	0.64	-0.5
1,779,042	-		Echvi_1550	0.83	-1.3
1,779,116	+				-2.6
1,779,116	+				-0.5
1,779,117	-				-0.6
1,779,117	-				-1.3
1,779,119	+				-1.9
1,779,119	+				-2.6
1,779,119	+				-2.2
1,779,119	+				-1.3
1,779,119	+				-2.7
1,779,119	+				-1.5
1,779,120	-				-1.4
1,779,155	+				-1.4
1,779,156	-				+1.3
1,779,156	-				-1.4
1,779,156	-				-1.8
1,779,156	-				+0.7
1,779,179	-				+1.2
1,779,251	-				-1.0
1,779,251	-				-0.5
1,779,280	+				-2.0
1,779,281	-				+0.0
1,779,319	-				+0.4
1,779,320	+				-0.6
1,779,321	-				-0.2
1,779,334	-				-1.0
1,779,463	+				-1.5
1,779,464	-				-0.8
1,779,506	+				-0.6
1,779,507	-				-0.7
1,779,507	-				-0.6
1,779,535	+				-1.2
1,779,617	-		Echvi_1551	0.12	-0.2
1,779,668	+		Echvi_1551	0.14	-0.8
1,779,669	-		Echvi_1551	0.14	+0.9
1,779,752	-		Echvi_1551	0.16	+0.1
1,779,817	-		Echvi_1551	0.18	-0.1
1,779,817	-		Echvi_1551	0.18	+2.0
1,779,970	-		Echvi_1551	0.23	+0.1
1,779,970	-		Echvi_1551	0.23	+0.1
1,780,003	+		Echvi_1551	0.24	-1.1
1,780,047	-		Echvi_1551	0.26	-0.3
1,780,127	-		Echvi_1551	0.28	-1.0
1,780,158	+		Echvi_1551	0.29	-2.9
1,780,158	+		Echvi_1551	0.29	-1.2
1,780,208	+		Echvi_1551	0.31	-1.4
1,780,224	-		Echvi_1551	0.31	-1.0
1,780,280	-		Echvi_1551	0.33	+0.4
1,780,312	+		Echvi_1551	0.34	-2.0
1,780,313	-		Echvi_1551	0.34	-0.5
1,780,313	-		Echvi_1551	0.34	-0.4
1,780,328	-		Echvi_1551	0.35	-0.6
1,780,343	-		Echvi_1551	0.35	+0.4
1,780,353	-		Echvi_1551	0.35	-0.4
1,780,362	+		Echvi_1551	0.36	-1.1
1,780,362	+		Echvi_1551	0.36	-1.9
1,780,362	+		Echvi_1551	0.36	-2.7
1,780,363	-		Echvi_1551	0.36	+0.8
1,780,363	-		Echvi_1551	0.36	-1.7
1,780,363	-		Echvi_1551	0.36	-0.3
1,780,376	+		Echvi_1551	0.36	-3.2
1,780,376	+		Echvi_1551	0.36	-1.3
1,780,376	+		Echvi_1551	0.36	-1.4
1,780,377	-		Echvi_1551	0.36	-0.5
1,780,461	+		Echvi_1551	0.39	-0.3
1,780,462	-		Echvi_1551	0.39	-0.4
1,780,503	+		Echvi_1551	0.40	+0.1
1,780,552	+		Echvi_1551	0.42	-1.9
1,780,552	+		Echvi_1551	0.42	-1.6
1,780,668	-		Echvi_1551	0.45	+0.4
1,780,799	+		Echvi_1551	0.50	-0.9
1,780,817	+		Echvi_1551	0.50	-1.5
1,780,817	+		Echvi_1551	0.50	-2.4
1,780,849	+		Echvi_1551	0.51	-2.4
1,780,849	+		Echvi_1551	0.51	-2.4
1,780,849	+		Echvi_1551	0.51	-1.7
1,780,886	+		Echvi_1551	0.52	-1.3
1,780,887	-		Echvi_1551	0.52	-0.8
1,780,887	-		Echvi_1551	0.52	+0.2
1,780,889	-		Echvi_1551	0.52	-0.8
1,780,928	+		Echvi_1551	0.54	-1.4
1,780,929	-		Echvi_1551	0.54	-1.3
1,781,063	+		Echvi_1551	0.58	-0.3
1,781,063	+		Echvi_1551	0.58	-2.3
1,781,064	-		Echvi_1551	0.58	-1.0
1,781,088	+		Echvi_1551	0.59	-0.6
1,781,088	+		Echvi_1551	0.59	-2.3
1,781,088	+		Echvi_1551	0.59	-0.6
1,781,089	-		Echvi_1551	0.59	+1.0
1,781,186	+		Echvi_1551	0.62	-2.2
1,781,257	+		Echvi_1551	0.64	-0.4
1,781,387	-		Echvi_1551	0.68	-0.0
1,781,456	-		Echvi_1551	0.70	+0.6
1,781,484	+		Echvi_1551	0.71	+0.7
1,781,484	+		Echvi_1551	0.71	-3.4
1,781,499	+		Echvi_1551	0.72	-3.2
1,781,499	+		Echvi_1551	0.72	-1.5
1,781,505	+		Echvi_1551	0.72	-2.8
1,781,505	+		Echvi_1551	0.72	-2.2
1,781,541	-		Echvi_1551	0.73	-0.2
1,781,649	-		Echvi_1551	0.77	-0.2
1,781,666	+		Echvi_1551	0.77	-0.8
1,781,667	-		Echvi_1551	0.77	-0.4
1,781,667	-		Echvi_1551	0.77	-1.0
1,781,717	-		Echvi_1551	0.79	+0.5
1,781,768	-		Echvi_1551	0.80	+1.5
1,781,778	+		Echvi_1551	0.81	-1.3
1,781,779	-		Echvi_1551	0.81	+1.7
1,781,833	+		Echvi_1551	0.82	-1.3
1,781,834	-		Echvi_1551	0.82	-0.3
1,781,856	+		Echvi_1551	0.83	-3.4
1,781,877	+		Echvi_1551	0.84	-2.0
1,781,878	-		Echvi_1551	0.84	+0.1
1,781,878	-		Echvi_1551	0.84	-0.3
1,781,886	+		Echvi_1551	0.84	-1.4
1,781,886	+		Echvi_1551	0.84	-2.3
1,781,886	+		Echvi_1551	0.84	-1.6
1,781,887	-		Echvi_1551	0.84	+0.2
1,781,887	-		Echvi_1551	0.84	-1.1
1,781,887	-		Echvi_1551	0.84	-0.1
1,781,975	+		Echvi_1551	0.87	-0.4
1,782,040	+		Echvi_1551	0.89	-1.8
1,782,047	+		Echvi_1551	0.89	-2.8
1,782,276	+				-2.2
1,782,276	+				-1.3
1,782,277	-				+1.3
1,782,277	-				+1.0
1,782,277	-				+0.3
1,782,277	-				-0.5
1,782,277	-				-2.0
1,782,279	+				-3.1
1,782,279	+				-0.2
1,782,280	-				-0.1
1,782,283	+				-1.1
1,782,283	+				-1.1
1,782,283	+				-0.5
1,782,283	+				-2.1
1,782,284	-				+1.5
1,782,284	-				-1.1
1,782,333	-				-0.7
1,782,381	+				-0.8
1,782,381	+				-1.7
1,782,382	-				-1.0
1,782,388	-				+0.7
1,782,391	-				+0.1
1,782,391	-				+0.1
1,782,397	+				-1.4
1,782,397	+				-1.3
1,782,398	-				+0.5
1,782,398	-				-0.6
1,782,398	-				+1.7
1,782,399	+				-1.4
1,782,399	+				+0.9
1,782,400	-				-0.7
1,782,400	-				+0.8
1,782,400	-				-0.2
1,782,400	-				-0.1
1,782,400	-				-1.6
1,782,409	+				-1.6
1,782,415	-				+0.4
1,782,415	-				+0.3
1,782,423	-				-0.3
1,782,423	-				-0.4
1,782,431	-				+0.2
1,782,456	+				-3.0
1,782,456	+				-4.5
1,782,457	-				-0.1
1,782,462	+				-2.4
1,782,462	+				-2.8
1,782,463	-				+0.1
1,782,463	-				-1.1
1,782,463	-				-0.0
1,782,472	+				-3.3
1,782,563	+				-3.1
1,782,564	-				-0.3
1,782,564	-				+0.4
1,782,572	+				-2.1
1,782,573	-				+0.4
1,782,595	+				-2.8
1,782,595	+				-0.9
1,782,596	-				-0.6
1,782,606	+				-2.4
1,782,607	-				+0.1
1,782,659	-				+0.2
1,782,680	+				+1.1
1,782,680	+				-0.6
1,782,690	+		Echvi_1552	0.10	-1.8
1,782,691	-		Echvi_1552	0.11	+2.3
1,782,727	+		Echvi_1552	0.25	+0.2
1,782,761	-		Echvi_1552	0.39	+0.4
1,782,832	-		Echvi_1552	0.68	-0.5
1,782,894	+				-1.0
1,782,894	+				-0.2
1,782,895	-				+0.1
1,782,895	-				-1.1
1,782,982	+				+2.3
1,782,988	+				-1.1
1,782,988	+				-0.5
1,782,988	+				+0.8
1,782,988	+				+1.4
1,782,988	+				-1.1
1,782,989	-				+0.5
1,782,989	-				+0.3
1,782,989	-				-0.1
1,782,989	-				+0.9
1,782,996	-				+0.8
1,782,999	+				+0.5
1,783,000	-				-0.2
1,783,009	+				-0.4
1,783,010	-				-0.8
1,783,017	+				+0.3
1,783,065	+		Echvi_1553	0.13	+1.7
1,783,066	-		Echvi_1553	0.13	+1.5
1,783,100	-		Echvi_1553	0.17	+1.0
1,783,121	+		Echvi_1553	0.20	-0.1
1,783,122	-		Echvi_1553	0.20	-0.7
1,783,161	+		Echvi_1553	0.25	+0.8
1,783,182	-		Echvi_1553	0.28	+0.7
1,783,182	-		Echvi_1553	0.28	+1.4
1,783,198	-		Echvi_1553	0.30	-0.2
1,783,235	+		Echvi_1553	0.34	+0.1
1,783,254	+		Echvi_1553	0.37	+0.7
1,783,254	+		Echvi_1553	0.37	-0.5
1,783,254	+		Echvi_1553	0.37	-0.6
1,783,257	-		Echvi_1553	0.37	-0.5
1,783,267	+		Echvi_1553	0.38	-0.5
1,783,268	-		Echvi_1553	0.39	-0.1
1,783,301	-		Echvi_1553	0.43	-0.4
1,783,308	+		Echvi_1553	0.44	-0.1