Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1242

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
1,424,228	+		Echvi_1241	0.27	-0.0
1,424,246	-		Echvi_1241	0.31	+1.3
1,424,288	+		Echvi_1241	0.40	+2.1
1,424,288	+		Echvi_1241	0.40	-0.3
1,424,288	+		Echvi_1241	0.40	-0.3
1,424,288	+		Echvi_1241	0.40	+0.2
1,424,289	-		Echvi_1241	0.40	+0.5
1,424,289	-		Echvi_1241	0.40	-0.3
1,424,289	-		Echvi_1241	0.40	-0.2
1,424,296	+		Echvi_1241	0.42	-0.6
1,424,296	+		Echvi_1241	0.42	-1.1
1,424,297	-		Echvi_1241	0.42	-0.7
1,424,305	-		Echvi_1241	0.44	-1.4
1,424,355	+		Echvi_1241	0.55	-0.4
1,424,356	-		Echvi_1241	0.55	+0.2
1,424,367	+		Echvi_1241	0.58	+0.5
1,424,367	+		Echvi_1241	0.58	-1.5
1,424,367	+		Echvi_1241	0.58	+0.3
1,424,368	-		Echvi_1241	0.58	-0.1
1,424,395	+		Echvi_1241	0.64	-0.2
1,424,396	-		Echvi_1241	0.64	-0.1
1,424,476	+		Echvi_1241	0.82	+0.7
1,424,476	+		Echvi_1241	0.82	-1.4
1,424,477	-		Echvi_1241	0.83	-0.1
1,424,554	+				-1.0
1,424,555	-				-0.2
1,424,555	-				+1.1
1,424,581	-				-1.4
1,424,581	-				-0.1
1,424,636	+				+0.3
1,424,636	+				-2.2
1,424,637	-				-2.5
1,424,675	-				+0.4
1,424,675	-				+0.2
1,424,675	-				+0.2
1,424,675	-				-0.6
1,424,678	+				-0.1
1,424,678	+				-0.2
1,424,679	-				-0.2
1,424,679	-				-2.0
1,424,679	-				-1.8
1,424,679	-				-0.1
1,424,682	+				+0.5
1,424,682	+				+1.1
1,424,682	+				-1.5
1,424,682	+				-0.6
1,424,683	-				-0.8
1,424,683	-				-0.2
1,424,688	+				-0.2
1,424,689	-				-0.8
1,424,700	-				+0.7
1,424,728	-				+0.1
1,424,741	-				+0.2
1,424,741	-				-0.6
1,424,741	-				+1.0
1,424,744	+				+0.5
1,424,744	+				-0.1
1,424,744	+				-0.0
1,424,745	-				-1.1
1,424,745	-				-1.3
1,424,745	-				-1.0
1,424,745	-				-0.3
1,424,745	-				-0.3
1,424,750	+				+0.5
1,424,750	+				-2.8
1,424,751	-				+0.6
1,424,751	-				+0.1
1,424,751	-				+1.3
1,424,751	-				-1.3
1,424,771	-				-0.4
1,424,805	+				+0.1
1,424,806	-				+0.6
1,424,824	+				+0.6
1,424,824	+				-0.3
1,424,824	+				-0.4
1,424,825	-				-0.7
1,424,854	+				+1.1
1,424,854	+				+0.2
1,424,855	-				-1.1
1,424,855	-				-0.1
1,424,855	-				-0.3
1,424,858	+				-0.6
1,424,858	+				-1.7
1,424,868	+				-0.6
1,424,868	+				-0.2
1,424,868	+				-1.1
1,424,869	-				-2.0
1,424,869	-				-1.0
1,424,875	+				-0.5
1,424,876	-				-1.2
1,424,876	-				-0.6
1,424,876	-				-0.3
1,424,948	-				-2.6
1,424,978	-				-0.5
1,424,986	+				-1.1
1,425,089	-				-0.9
1,425,089	-				-0.1
1,425,091	+				+1.1
1,425,092	-				+1.7
1,425,092	-				+0.7
1,425,163	+				+1.0
1,425,164	-				+0.1
1,425,164	-				+0.3
1,425,164	-				-0.6
1,425,164	-				+0.0
1,425,203	+				-0.1
1,425,203	+				+0.1
1,425,210	+				+1.1
1,425,210	+				-0.5
1,425,211	-				-0.8
1,425,211	-				+0.6
1,425,211	-				+0.9
1,425,213	+				-1.3
1,425,213	+				-0.6
1,425,214	-				-0.2
1,425,216	+				+0.9
1,425,216	+				+0.2
1,425,269	+				-1.8
1,425,269	+				+0.8
1,425,269	+				-0.1
1,425,320	-		Echvi_1242	0.17	-0.3
1,425,325	+		Echvi_1242	0.18	-0.3
1,425,326	-		Echvi_1242	0.18	+0.3
1,425,326	-		Echvi_1242	0.18	-0.5
1,425,326	-		Echvi_1242	0.18	+1.4
1,425,326	-		Echvi_1242	0.18	-0.2
1,425,326	-		Echvi_1242	0.18	-1.1
1,425,340	-		Echvi_1242	0.20	+0.2
1,425,382	+		Echvi_1242	0.27	+0.1
1,425,382	+		Echvi_1242	0.27	-0.6
1,425,383	-		Echvi_1242	0.27	+0.4
1,425,399	-		Echvi_1242	0.30	+0.1
1,425,428	-		Echvi_1242	0.35	-0.3
1,425,559	-		Echvi_1242	0.56	+0.1
1,425,585	-		Echvi_1242	0.61	-0.6
1,425,585	-		Echvi_1242	0.61	+1.7
1,425,585	-		Echvi_1242	0.61	-0.4
1,425,585	-		Echvi_1242	0.61	+0.3
1,425,632	-		Echvi_1242	0.68	+0.1
1,425,632	-		Echvi_1242	0.68	-0.4
1,425,639	-		Echvi_1242	0.70	-0.1
1,425,653	+		Echvi_1242	0.72	-0.9
1,425,653	+		Echvi_1242	0.72	-0.8
1,425,653	+		Echvi_1242	0.72	+0.1
1,425,653	+		Echvi_1242	0.72	-1.6
1,425,653	+		Echvi_1242	0.72	-1.5
1,425,654	-		Echvi_1242	0.72	-0.3
1,425,654	-		Echvi_1242	0.72	+0.1
1,425,654	-		Echvi_1242	0.72	-0.5
1,425,660	+		Echvi_1242	0.73	+0.3
1,425,661	-		Echvi_1242	0.73	-0.2
1,425,693	+		Echvi_1242	0.79	+1.5
1,425,763	+				+0.7
1,425,770	+				+1.4
1,425,770	+				-0.9
1,425,770	+				+0.0
1,425,770	+				+0.1
1,425,770	+				+0.5
1,425,778	+				+1.0
1,425,779	-				-0.4
1,425,798	+				+0.5
1,425,799	-				+0.1
1,425,820	+				-0.3
1,425,820	+				+0.4
1,425,821	-				-0.5
1,425,933	+				-1.1
1,425,933	+				+0.6
1,425,933	+				-0.0
1,425,934	-				+0.1
1,425,934	-				+0.0
1,425,943	+				+0.6
1,425,943	+				+0.6
1,425,943	+				+0.1
1,425,943	+				+1.2
1,425,944	-				+0.1
1,425,951	-				-1.5
1,425,951	-				+1.2
1,425,954	+				-0.6
1,425,955	-				-0.3
1,425,955	-				+0.0
1,425,960	+				+1.7
1,425,960	+				+0.1
1,425,960	+				-1.2
1,425,961	-				-0.6
1,426,150	+				-0.1
1,426,151	-				-1.7
1,426,151	-				+0.3
1,426,160	+				-0.0
1,426,161	-				-1.2
1,426,211	-				+0.3
1,426,231	-				+0.5
1,426,275	+				-0.6
1,426,276	-				-0.6
1,426,285	-				+1.3
1,426,322	-				-1.1
1,426,322	-				+1.5
1,426,322	-				-0.4
1,426,344	-				-0.1
1,426,344	-				-0.2
1,426,376	+				+0.7
1,426,377	-				-0.4
1,426,381	+				-1.1
1,426,390	+				-0.0
1,426,390	+				-2.5
1,426,395	+				-0.3
1,426,395	+				-2.5
1,426,395	+				-1.2
1,426,402	-				+0.5
1,426,424	+				+0.4
1,426,425	-				-1.1
1,426,444	+				-0.5
1,426,445	-				+0.1
1,426,494	-				+0.9
1,426,532	+				+1.4
1,426,533	-				+0.2
1,426,553	-		Echvi_1243	0.10	-0.1
1,426,553	-		Echvi_1243	0.10	+0.3
1,426,621	+		Echvi_1243	0.15	-0.6
1,426,621	+		Echvi_1243	0.15	-0.5
1,426,622	-		Echvi_1243	0.15	-1.0
1,426,773	-		Echvi_1243	0.25	+0.5