Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1158

Experiment: m.b. Tetracycline 0.12 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.12 mg/ml
1,324,436	+		Echvi_1156	0.86	+0.0
1,324,596	-				+1.0
1,324,607	-				+0.1
1,324,613	+				-0.0
1,324,614	-				-0.5
1,324,619	-				+0.0
1,324,633	-				+1.7
1,324,633	-				+0.0
1,324,633	-				-1.6
1,324,650	-				+2.7
1,324,657	+				-1.0
1,324,658	-				-1.6
1,324,662	-				-1.0
1,324,676	+				+0.8
1,324,690	+				-0.4
1,324,691	-				+0.7
1,324,691	-				-1.3
1,324,691	-				-0.6
1,324,701	+				-0.4
1,324,787	-				-1.2
1,324,810	+				+0.9
1,324,854	+				+0.3
1,324,912	+				-0.6
1,324,912	+				+1.0
1,324,912	+				+0.7
1,324,924	+				-0.7
1,324,925	-				-1.1
1,324,925	-				+0.1
1,324,925	-				+1.4
1,324,925	-				+0.5
1,324,945	+				-0.6
1,324,945	+				+0.6
1,324,945	+				+0.3
1,324,952	-				-0.9
1,325,018	-		Echvi_1157	0.16	-0.8
1,325,021	+		Echvi_1157	0.17	+0.2
1,325,021	+		Echvi_1157	0.17	-0.1
1,325,022	-		Echvi_1157	0.17	+1.5
1,325,022	-		Echvi_1157	0.17	-0.4
1,325,022	-		Echvi_1157	0.17	-1.7
1,325,024	-		Echvi_1157	0.18	+0.6
1,325,077	+		Echvi_1157	0.33	+0.1
1,325,077	+		Echvi_1157	0.33	+0.2
1,325,083	+		Echvi_1157	0.34	-0.9
1,325,104	-		Echvi_1157	0.40	+1.7
1,325,187	-		Echvi_1157	0.63	-0.3
1,325,203	+		Echvi_1157	0.68	-0.2
1,325,204	-		Echvi_1157	0.68	+1.0
1,325,223	+		Echvi_1157	0.73	+2.4
1,325,237	+		Echvi_1157	0.77	+0.5
1,325,402	+				-0.9
1,325,421	-				-0.5
1,325,424	+				-1.5
1,325,449	+				-1.3
1,325,539	-		Echvi_1158	0.15	-0.8
1,325,539	-		Echvi_1158	0.15	+0.4
1,325,600	+		Echvi_1158	0.22	+0.7
1,325,601	-		Echvi_1158	0.22	-0.4
1,325,649	+		Echvi_1158	0.28	-1.1
1,325,650	-		Echvi_1158	0.28	-2.0
1,325,695	+		Echvi_1158	0.33	-1.6
1,325,746	+		Echvi_1158	0.39	-0.1
1,325,746	+		Echvi_1158	0.39	-1.9
1,325,747	-		Echvi_1158	0.40	-1.9
1,325,764	+		Echvi_1158	0.41	-0.7
1,325,765	-		Echvi_1158	0.42	+0.1
1,325,765	-		Echvi_1158	0.42	-0.9
1,325,765	-		Echvi_1158	0.42	+0.5
1,325,765	-		Echvi_1158	0.42	+0.5
1,325,771	-		Echvi_1158	0.42	-0.1
1,325,895	-		Echvi_1158	0.57	+0.3
1,325,904	+		Echvi_1158	0.58	-0.4
1,325,904	+		Echvi_1158	0.58	-0.1
1,325,953	+		Echvi_1158	0.64	-1.6
1,325,953	+		Echvi_1158	0.64	+1.3
1,326,070	+		Echvi_1158	0.77	-1.5
1,326,071	-		Echvi_1158	0.77	-0.1
1,326,071	-		Echvi_1158	0.77	-0.7
1,326,082	+		Echvi_1158	0.79	-1.0
1,326,082	+		Echvi_1158	0.79	-1.4
1,326,090	-		Echvi_1158	0.79	-0.5
1,326,128	-		Echvi_1158	0.84	-0.1
1,326,128	-		Echvi_1158	0.84	+0.9
1,326,202	+				-0.7
1,326,202	+				-1.5
1,326,203	-				+0.8
1,326,281	+				+0.7
1,326,282	-				+0.7
1,326,432	+		Echvi_1159	0.18	+0.0
1,326,433	-		Echvi_1159	0.18	-0.0
1,326,475	-		Echvi_1159	0.24	+0.1
1,326,475	-		Echvi_1159	0.24	-0.1
1,326,491	-		Echvi_1159	0.26	-0.2
1,326,509	+		Echvi_1159	0.28	-2.5
1,326,524	+		Echvi_1159	0.30	-0.1
1,326,535	+		Echvi_1159	0.32	+0.2
1,326,536	-		Echvi_1159	0.32	+1.0
1,326,539	+		Echvi_1159	0.32	-0.9
1,326,540	-		Echvi_1159	0.32	+0.4
1,326,540	-		Echvi_1159	0.32	+0.7
1,326,597	-		Echvi_1159	0.40	+1.0
1,326,597	-		Echvi_1159	0.40	+1.3
1,326,652	+		Echvi_1159	0.47	+1.7
1,326,653	-		Echvi_1159	0.47	+1.7
1,326,653	-		Echvi_1159	0.47	-1.6
1,326,653	-		Echvi_1159	0.47	-0.6
1,326,653	-		Echvi_1159	0.47	+1.1
1,326,657	+		Echvi_1159	0.47	-0.8
1,326,740	-		Echvi_1159	0.58	-0.1
1,326,813	+		Echvi_1159	0.68	-0.1
1,326,813	+		Echvi_1159	0.68	+0.6
1,326,814	-		Echvi_1159	0.68	-2.5
1,326,814	-		Echvi_1159	0.68	-0.1
1,326,858	-		Echvi_1159	0.74	+0.4
1,326,863	-		Echvi_1159	0.74	-0.8
1,326,965	+		Echvi_1159	0.87	+0.3
1,326,974	+		Echvi_1159	0.89	+2.2
1,326,974	+		Echvi_1159	0.89	+0.1
1,326,974	+		Echvi_1159	0.89	+0.3
1,326,975	-		Echvi_1159	0.89	-0.4
1,326,996	+				-0.1
1,326,997	-				-0.2
1,326,997	-				+0.2
1,327,007	+				-0.6
1,327,008	-				+0.6
1,327,008	-				-1.5
1,327,008	-				-0.0
1,327,031	-				-0.5
1,327,031	-				-0.4
1,327,034	+				+0.6
1,327,035	-				+0.8
1,327,035	-				+0.1
1,327,109	-				-0.0
1,327,241	+				-0.7
1,327,241	+				+1.0