Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4505

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
5,380,457	-				+1.4
5,380,506	+		Echvi_4504	0.14	-0.5
5,380,506	+		Echvi_4504	0.14	-0.8
5,380,507	-		Echvi_4504	0.14	+1.3
5,380,510	+		Echvi_4504	0.14	-1.3
5,380,551	-		Echvi_4504	0.18	+0.9
5,380,586	+		Echvi_4504	0.21	+0.6
5,380,593	+		Echvi_4504	0.22	-0.5
5,380,594	-		Echvi_4504	0.22	-0.3
5,380,595	+		Echvi_4504	0.22	+0.7
5,380,595	+		Echvi_4504	0.22	-0.4
5,380,595	+		Echvi_4504	0.22	-0.5
5,380,595	+		Echvi_4504	0.22	-0.8
5,380,595	+		Echvi_4504	0.22	-1.0
5,380,596	-		Echvi_4504	0.22	-0.1
5,380,596	-		Echvi_4504	0.22	-1.4
5,380,596	-		Echvi_4504	0.22	-3.4
5,380,600	-		Echvi_4504	0.23	+0.6
5,380,809	-		Echvi_4504	0.42	+0.5
5,380,820	+		Echvi_4504	0.43	-0.8
5,380,820	+		Echvi_4504	0.43	+0.1
5,380,841	+		Echvi_4504	0.45	-3.6
5,380,930	+		Echvi_4504	0.53	-1.4
5,381,015	-		Echvi_4504	0.61	-0.6
5,381,020	-		Echvi_4504	0.62	+0.8
5,381,063	-		Echvi_4504	0.66	+2.8
5,381,080	-		Echvi_4504	0.67	+0.8
5,381,082	-		Echvi_4504	0.68	+1.0
5,381,269	-		Echvi_4504	0.85	+0.2
5,381,272	-		Echvi_4504	0.85	-1.3
5,381,274	-		Echvi_4504	0.85	+1.0
5,381,274	-		Echvi_4504	0.85	+0.4
5,381,290	+		Echvi_4504	0.87	-2.6
5,381,290	+		Echvi_4504	0.87	-0.2
5,381,291	-		Echvi_4504	0.87	-0.2
5,381,292	+		Echvi_4504	0.87	+1.5
5,381,292	+		Echvi_4504	0.87	-0.0
5,381,292	+		Echvi_4504	0.87	-3.1
5,381,293	-		Echvi_4504	0.87	-0.3
5,381,293	-		Echvi_4504	0.87	-0.6
5,381,344	-				-0.4
5,381,450	-				-1.3
5,381,450	-				-0.4
5,381,490	+				+0.3
5,381,491	-				+0.2
5,381,512	-				+1.3
5,381,574	+		Echvi_4505	0.14	-0.2
5,381,575	-		Echvi_4505	0.14	-1.2
5,381,575	-		Echvi_4505	0.14	+0.5
5,381,664	+		Echvi_4505	0.24	+1.0
5,381,805	-		Echvi_4505	0.39	+0.1
5,382,047	+		Echvi_4505	0.65	-0.9
5,382,079	+		Echvi_4505	0.69	-0.7
5,382,116	+		Echvi_4505	0.73	+0.2
5,382,116	+		Echvi_4505	0.73	-0.4
5,382,117	-		Echvi_4505	0.73	+0.2
5,382,120	+		Echvi_4505	0.73	-1.0
5,382,121	-		Echvi_4505	0.73	-0.9
5,382,145	+		Echvi_4505	0.76	-0.8
5,382,146	-		Echvi_4505	0.76	+0.1
5,382,181	+		Echvi_4505	0.80	-0.3
5,382,185	-		Echvi_4505	0.80	+2.8
5,382,250	+		Echvi_4505	0.87	+0.4
5,382,251	-		Echvi_4505	0.87	-0.7
5,382,289	-				-0.6
5,382,407	+				-0.0
5,382,410	+				-0.1
5,382,506	-		Echvi_4506	0.10	-0.6
5,382,551	+		Echvi_4506	0.14	-0.6
5,382,552	-		Echvi_4506	0.15	-0.2
5,382,671	+		Echvi_4506	0.25	-0.1
5,382,908	-		Echvi_4506	0.47	+2.3
5,383,109	-		Echvi_4506	0.65	-1.0
5,383,114	+		Echvi_4506	0.65	+0.2
5,383,114	+		Echvi_4506	0.65	-0.2
5,383,142	+		Echvi_4506	0.68	+0.7
5,383,142	+		Echvi_4506	0.68	+1.2
5,383,162	+		Echvi_4506	0.70	+0.1
5,383,163	-		Echvi_4506	0.70	+2.8
5,383,284	+		Echvi_4506	0.81	-0.1
5,383,284	+		Echvi_4506	0.81	+1.4
5,383,284	+		Echvi_4506	0.81	+0.5
5,383,284	+		Echvi_4506	0.81	-0.4
5,383,285	-		Echvi_4506	0.81	-0.1
5,383,303	+		Echvi_4506	0.83	+0.2
5,383,304	-		Echvi_4506	0.83	+0.2
5,383,304	-		Echvi_4506	0.83	+0.1
5,383,330	-		Echvi_4506	0.85	+0.6
5,383,337	+		Echvi_4506	0.86	+0.3