Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4311

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
5,147,020	+		Echvi_4310	0.40	+0.2
5,147,021	-		Echvi_4310	0.40	-0.4
5,147,063	+		Echvi_4310	0.42	-0.5
5,147,063	+		Echvi_4310	0.42	+1.0
5,147,064	-		Echvi_4310	0.42	+0.4
5,147,064	-		Echvi_4310	0.42	-1.2
5,147,065	+		Echvi_4310	0.42	-0.5
5,147,073	-		Echvi_4310	0.43	-0.4
5,147,073	-		Echvi_4310	0.43	-0.5
5,147,149	+		Echvi_4310	0.48	-0.1
5,147,149	+		Echvi_4310	0.48	+0.6
5,147,150	-		Echvi_4310	0.48	+0.2
5,147,213	+		Echvi_4310	0.52	-0.0
5,147,234	-		Echvi_4310	0.53	+0.9
5,147,250	+		Echvi_4310	0.54	+0.7
5,147,311	+		Echvi_4310	0.58	+0.7
5,147,513	-		Echvi_4310	0.70	+0.2
5,147,555	-		Echvi_4310	0.73	-0.6
5,147,555	-		Echvi_4310	0.73	-0.3
5,147,631	+		Echvi_4310	0.78	+0.2
5,147,632	-		Echvi_4310	0.78	-0.5
5,147,632	-		Echvi_4310	0.78	-0.8
5,147,632	-		Echvi_4310	0.78	+0.4
5,147,632	-		Echvi_4310	0.78	+0.2
5,147,632	-		Echvi_4310	0.78	+0.3
5,147,660	+		Echvi_4310	0.79	-0.1
5,147,692	-		Echvi_4310	0.81	-0.4
5,147,735	+		Echvi_4310	0.84	-0.9
5,147,736	-		Echvi_4310	0.84	-0.3
5,147,797	-		Echvi_4310	0.88	+0.1
5,147,888	+				+0.6
5,147,888	+				-1.8
5,147,889	-				-1.5
5,147,940	-				+1.2
5,148,018	+				-0.1
5,148,019	-				-0.9
5,148,020	+				+0.7
5,148,021	-				+0.0
5,148,021	-				+0.5
5,148,033	+				+0.3
5,148,033	+				-0.5
5,148,034	-				+0.3
5,148,077	-				-0.4
5,148,175	-		Echvi_4311	0.14	-0.5
5,148,455	+		Echvi_4311	0.38	-0.5
5,148,460	+		Echvi_4311	0.38	-1.1
5,148,460	+		Echvi_4311	0.38	-0.0
5,148,460	+		Echvi_4311	0.38	-0.0
5,148,500	-		Echvi_4311	0.42	-0.6
5,148,501	+		Echvi_4311	0.42	+0.0
5,148,501	+		Echvi_4311	0.42	-0.7
5,148,502	-		Echvi_4311	0.42	+0.1
5,148,502	-		Echvi_4311	0.42	+1.7
5,148,502	-		Echvi_4311	0.42	-2.9
5,148,759	+		Echvi_4311	0.64	-0.1
5,148,760	-		Echvi_4311	0.64	+0.8
5,148,763	+		Echvi_4311	0.64	-0.5
5,148,797	-		Echvi_4311	0.67	-0.3
5,148,866	+		Echvi_4311	0.73	+0.7
5,148,866	+		Echvi_4311	0.73	+1.1
5,148,867	-		Echvi_4311	0.73	-2.7
5,148,867	-		Echvi_4311	0.73	-0.3
5,148,869	+		Echvi_4311	0.73	+0.2
5,148,869	+		Echvi_4311	0.73	-1.9
5,148,961	+		Echvi_4311	0.81	+0.8
5,149,032	-		Echvi_4311	0.87	-0.9
5,149,073	-				-2.3
5,149,160	-				+0.2
5,149,160	-				-0.6
5,149,160	-				-0.3
5,149,180	+				-0.1
5,149,180	+				+1.2
5,149,180	+				-1.2
5,149,194	+				+0.1
5,149,227	+				+0.0
5,149,283	+				+0.0
5,149,284	-				+1.1
5,149,294	-				-0.3
5,149,336	-		Echvi_4312	0.11	-0.5
5,149,538	+		Echvi_4312	0.24	-0.9
5,149,539	-		Echvi_4312	0.24	-1.8
5,149,620	+		Echvi_4312	0.30	+0.5
5,149,620	+		Echvi_4312	0.30	+0.1
5,149,621	-		Echvi_4312	0.30	+0.9
5,149,621	-		Echvi_4312	0.30	-0.2
5,149,621	-		Echvi_4312	0.30	+0.4
5,149,734	-		Echvi_4312	0.38	-0.1
5,149,756	-		Echvi_4312	0.39	+2.4
5,149,816	-		Echvi_4312	0.43	+0.1
5,149,817	+		Echvi_4312	0.43	+0.9
5,149,823	-		Echvi_4312	0.44	+0.6
5,149,913	+		Echvi_4312	0.50	+1.2
5,149,915	+		Echvi_4312	0.50	+0.1
5,149,915	+		Echvi_4312	0.50	+0.7
5,149,916	-		Echvi_4312	0.50	+0.1
5,150,031	-		Echvi_4312	0.58	+0.3
5,150,070	-		Echvi_4312	0.60	+0.3
5,150,115	+		Echvi_4312	0.64	+0.5
5,150,115	+		Echvi_4312	0.64	-0.9
5,150,115	+		Echvi_4312	0.64	-0.4
5,150,115	+		Echvi_4312	0.64	-0.5
5,150,116	-		Echvi_4312	0.64	+0.2
5,150,146	+		Echvi_4312	0.66	+2.1
5,150,146	+		Echvi_4312	0.66	+0.6
5,150,147	-		Echvi_4312	0.66	+1.3
5,150,160	-		Echvi_4312	0.67	+0.4