Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3106

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
3,712,620	+		Echvi_3105	0.76	+1.2
3,712,620	+		Echvi_3105	0.76	-1.1
3,712,621	-		Echvi_3105	0.76	+0.2
3,712,621	-		Echvi_3105	0.76	-1.0
3,712,747	+		Echvi_3105	0.80	+0.2
3,712,748	-		Echvi_3105	0.80	-0.3
3,712,748	-		Echvi_3105	0.80	-0.4
3,712,853	+		Echvi_3105	0.83	-0.2
3,712,970	+		Echvi_3105	0.87	-0.3
3,713,163	+				+0.6
3,713,231	-				+1.0
3,713,287	+				+0.9
3,713,350	+				-0.4
3,713,355	-				+0.2
3,713,452	+				-1.2
3,713,624	-				-0.5
3,713,628	-				+0.4
3,713,628	-				-0.6
3,713,679	-				-1.4
3,713,684	+				-0.2
3,713,687	+				-0.4
3,713,688	-				-0.7
3,713,691	+				-1.1
3,713,691	+				+0.7
3,713,691	+				-0.3
3,713,691	+				+1.2
3,713,691	+				+0.3
3,713,692	-				-1.7
3,713,692	-				-0.3
3,713,905	-		Echvi_3106	0.22	-1.1
3,713,921	+		Echvi_3106	0.24	+1.0
3,713,921	+		Echvi_3106	0.24	+0.4
3,713,921	+		Echvi_3106	0.24	-0.1
3,713,922	-		Echvi_3106	0.24	+0.3
3,713,975	+		Echvi_3106	0.28	+1.6
3,713,976	-		Echvi_3106	0.28	+0.5
3,714,106	+		Echvi_3106	0.38	+1.0
3,714,143	-		Echvi_3106	0.40	-0.9
3,714,146	-		Echvi_3106	0.41	+2.2
3,714,275	+		Echvi_3106	0.50	-0.3
3,714,275	+		Echvi_3106	0.50	+1.1
3,714,489	-		Echvi_3106	0.67	-0.4
3,714,493	-		Echvi_3106	0.67	+0.5
3,714,546	-		Echvi_3106	0.71	+0.9
3,714,569	+		Echvi_3106	0.73	-1.4
3,714,646	+		Echvi_3106	0.78	+0.4
3,714,646	+		Echvi_3106	0.78	+0.7
3,714,646	+		Echvi_3106	0.78	-0.9
3,714,649	-		Echvi_3106	0.79	+1.1
3,714,709	+		Echvi_3106	0.83	+0.4
3,714,709	+		Echvi_3106	0.83	-0.6
3,714,710	-		Echvi_3106	0.83	+0.3
3,714,710	-		Echvi_3106	0.83	+0.5
3,714,719	-		Echvi_3106	0.84	+1.3
3,714,823	+				+0.3
3,714,824	-				+0.0
3,714,931	-				+0.1
3,714,931	-				+1.0
3,714,960	+				-0.2
3,714,981	+				-0.2
3,714,982	-				-0.5
3,715,016	-				+0.4
3,715,040	+				+0.4
3,715,045	+				-1.7
3,715,046	-				+0.8
3,715,050	-				+0.9
3,715,050	-				+1.4
3,715,050	-				-0.5
3,715,050	-				+0.2
3,715,050	-				+0.3
3,715,072	+				+0.7
3,715,169	+		Echvi_3107	0.13	+0.4
3,715,169	+		Echvi_3107	0.13	+0.2
3,715,240	+		Echvi_3107	0.21	+0.4
3,715,268	+		Echvi_3107	0.24	-0.3
3,715,284	-		Echvi_3107	0.26	-0.2
3,715,301	+		Echvi_3107	0.27	+0.1
3,715,301	+		Echvi_3107	0.27	-0.1
3,715,301	+		Echvi_3107	0.27	+0.5
3,715,301	+		Echvi_3107	0.27	-1.4
3,715,302	-		Echvi_3107	0.28	+0.1
3,715,306	+		Echvi_3107	0.28	-0.3
3,715,306	+		Echvi_3107	0.28	-0.3
3,715,311	-		Echvi_3107	0.29	+2.3
3,715,358	+		Echvi_3107	0.34	+0.0
3,715,361	-		Echvi_3107	0.34	-0.5
3,715,384	+		Echvi_3107	0.36	+0.4
3,715,385	-		Echvi_3107	0.36	+2.9
3,715,455	+		Echvi_3107	0.44	+0.3
3,715,455	+		Echvi_3107	0.44	-0.9
3,715,461	-		Echvi_3107	0.45	-0.4
3,715,462	+		Echvi_3107	0.45	+0.3
3,715,462	+		Echvi_3107	0.45	+0.3
3,715,463	-		Echvi_3107	0.45	+2.4
3,715,463	-		Echvi_3107	0.45	+0.1
3,715,463	-		Echvi_3107	0.45	+0.4
3,715,603	+		Echvi_3107	0.60	+0.1
3,715,603	+		Echvi_3107	0.60	-1.2
3,715,720	-		Echvi_3107	0.72	+0.3
3,715,743	-		Echvi_3107	0.75	-0.3
3,715,841	-		Echvi_3107	0.85	-0.2
3,715,841	-		Echvi_3107	0.85	+0.0
3,715,845	+		Echvi_3107	0.86	-1.3