Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3047

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
3,638,541	-		Echvi_3045	0.71	+0.0
3,638,578	-		Echvi_3045	0.77	-2.0
3,638,584	+		Echvi_3045	0.78	-0.8
3,638,591	-		Echvi_3045	0.79	-1.9
3,638,687	-				-2.6
3,638,687	-				+0.0
3,638,723	+				+0.3
3,638,723	+				-0.8
3,638,724	-				-0.4
3,638,726	+				-0.4
3,638,739	+				-1.6
3,638,740	-				-2.4
3,638,751	-				-0.6
3,638,908	+		Echvi_3046	0.24	-1.5
3,638,914	-		Echvi_3046	0.25	-1.9
3,638,945	+		Echvi_3046	0.28	-1.6
3,638,974	-		Echvi_3046	0.32	-0.6
3,639,082	-		Echvi_3046	0.44	-0.4
3,639,108	-		Echvi_3046	0.48	-2.9
3,639,113	+		Echvi_3046	0.48	-1.5
3,639,160	-		Echvi_3046	0.54	-1.6
3,639,249	-		Echvi_3046	0.64	+0.6
3,639,255	+		Echvi_3046	0.65	-0.4
3,639,255	+		Echvi_3046	0.65	+0.0
3,639,329	-		Echvi_3046	0.74	-0.3
3,639,394	-		Echvi_3046	0.81	-1.3
3,639,487	-				-1.0
3,639,487	-				+0.2
3,639,489	+				-1.0
3,639,489	+				-2.6
3,639,490	-				-1.4
3,639,490	-				-2.2
3,639,490	-				-1.7
3,639,529	+				-0.7
3,639,530	-				+1.0
3,639,531	+				+1.4
3,639,535	+				+1.0
3,639,547	+				-1.4
3,639,552	+				-1.5
3,639,553	-				-0.8
3,639,554	+				-2.6
3,639,554	+				-1.5
3,639,554	+				-1.2
3,639,554	+				-2.3
3,639,556	+				-2.1
3,639,556	+				+1.0
3,639,557	-				-1.3
3,639,594	+				-1.1
3,639,594	+				-1.3
3,639,667	-				-0.6
3,639,691	+				-1.3
3,639,697	-				-3.3
3,639,724	+				+0.4
3,639,750	-				-0.8
3,639,772	+				-1.7
3,639,773	-				-0.5
3,639,777	+				-0.7
3,639,778	-				-1.6
3,639,784	-		Echvi_3047	0.10	-2.1
3,639,818	-		Echvi_3047	0.12	-0.4
3,639,823	+		Echvi_3047	0.12	-1.5
3,639,824	-		Echvi_3047	0.12	+0.0
3,639,824	-		Echvi_3047	0.12	-2.1
3,639,824	-		Echvi_3047	0.12	-1.7
3,639,824	-		Echvi_3047	0.12	-1.4
3,639,840	-		Echvi_3047	0.12	-0.8
3,639,853	-		Echvi_3047	0.13	-1.5
3,639,997	+		Echvi_3047	0.19	+0.0
3,639,998	-		Echvi_3047	0.19	-0.6
3,640,049	-		Echvi_3047	0.21	-1.4
3,640,049	-		Echvi_3047	0.21	-1.1
3,640,054	-		Echvi_3047	0.21	-1.3
3,640,061	-		Echvi_3047	0.21	-2.4
3,640,061	-		Echvi_3047	0.21	-1.6
3,640,061	-		Echvi_3047	0.21	-1.3
3,640,064	+		Echvi_3047	0.22	-1.5
3,640,064	+		Echvi_3047	0.22	-1.7
3,640,065	-		Echvi_3047	0.22	-1.9
3,640,067	-		Echvi_3047	0.22	-1.7
3,640,277	-		Echvi_3047	0.30	-0.6
3,640,277	-		Echvi_3047	0.30	-0.6
3,640,288	+		Echvi_3047	0.31	-0.1
3,640,289	-		Echvi_3047	0.31	-1.2
3,640,289	-		Echvi_3047	0.31	-1.6
3,640,298	-		Echvi_3047	0.31	-1.2
3,640,327	+		Echvi_3047	0.32	-1.8
3,640,328	-		Echvi_3047	0.32	+0.4
3,640,338	-		Echvi_3047	0.33	-1.0
3,640,338	-		Echvi_3047	0.33	-3.2
3,640,346	+		Echvi_3047	0.33	-1.0
3,640,394	+		Echvi_3047	0.35	-1.6
3,640,394	+		Echvi_3047	0.35	-1.8
3,640,395	-		Echvi_3047	0.35	+0.1
3,640,407	+		Echvi_3047	0.36	-4.0
3,640,408	-		Echvi_3047	0.36	-0.7
3,640,422	+		Echvi_3047	0.36	-1.2
3,640,423	-		Echvi_3047	0.36	+0.5
3,640,423	-		Echvi_3047	0.36	-1.6
3,640,429	+		Echvi_3047	0.36	-1.1
3,640,457	-		Echvi_3047	0.38	+0.1
3,640,549	+		Echvi_3047	0.41	+0.0
3,640,570	-		Echvi_3047	0.42	-1.6
3,640,615	-		Echvi_3047	0.44	-0.9
3,640,627	+		Echvi_3047	0.45	-1.3
3,640,632	-		Echvi_3047	0.45	+1.6
3,640,664	-		Echvi_3047	0.46	-1.8
3,640,701	+		Echvi_3047	0.48	+0.3
3,640,771	+		Echvi_3047	0.50	-1.4
3,640,815	-		Echvi_3047	0.52	-0.3
3,640,922	-		Echvi_3047	0.57	-1.2
3,640,922	-		Echvi_3047	0.57	-1.5
3,640,958	+		Echvi_3047	0.58	-2.5
3,640,958	+		Echvi_3047	0.58	-2.4
3,640,958	+		Echvi_3047	0.58	-3.0
3,640,959	-		Echvi_3047	0.58	-0.2
3,640,959	-		Echvi_3047	0.58	-1.6
3,640,959	-		Echvi_3047	0.58	-2.0
3,640,972	+		Echvi_3047	0.59	-0.4
3,641,011	-		Echvi_3047	0.60	-0.8
3,641,110	+		Echvi_3047	0.64	-1.7
3,641,110	+		Echvi_3047	0.64	+0.3
3,641,110	+		Echvi_3047	0.64	+0.8
3,641,111	-		Echvi_3047	0.64	-2.4
3,641,125	-		Echvi_3047	0.65	-1.6
3,641,209	-		Echvi_3047	0.68	-0.4
3,641,209	-		Echvi_3047	0.68	-0.1
3,641,251	+		Echvi_3047	0.70	-2.6
3,641,276	+		Echvi_3047	0.71	-1.6
3,641,305	+		Echvi_3047	0.72	+0.0
3,641,306	-		Echvi_3047	0.72	-1.1
3,641,328	+		Echvi_3047	0.73	-0.3
3,641,329	-		Echvi_3047	0.73	-2.9
3,641,340	+		Echvi_3047	0.74	-2.1
3,641,340	+		Echvi_3047	0.74	-2.1
3,641,341	-		Echvi_3047	0.74	+1.2
3,641,347	-		Echvi_3047	0.74	-2.5
3,641,362	+		Echvi_3047	0.75	-2.2
3,641,365	-		Echvi_3047	0.75	-2.5
3,641,426	-		Echvi_3047	0.77	-0.6
3,641,461	+		Echvi_3047	0.79	-1.7
3,641,486	-		Echvi_3047	0.80	-1.6
3,641,495	-		Echvi_3047	0.80	-2.6
3,641,552	-		Echvi_3047	0.82	-2.3
3,641,577	-		Echvi_3047	0.83	-2.0
3,641,590	-		Echvi_3047	0.84	-0.8
3,641,596	+		Echvi_3047	0.84	-2.1
3,641,597	-		Echvi_3047	0.84	-1.3
3,641,597	-		Echvi_3047	0.84	-2.8
3,641,607	+		Echvi_3047	0.85	-0.9
3,641,706	+		Echvi_3047	0.89	-3.0
3,641,818	+				-2.0
3,641,818	+				-1.4
3,641,819	-				-2.1
3,641,871	+				-2.3
3,641,872	-				-0.4
3,641,872	-				+0.2
3,641,872	-				-0.3
3,641,872	-				-2.5
3,641,890	-				-2.1
3,641,924	-				-2.0
3,641,971	-				+0.6
3,641,975	+				+0.4
3,641,976	-				-1.6
3,641,976	-				+0.9
3,641,979	-				+1.4
3,641,979	-				+0.2
3,641,981	+				-0.5
3,641,982	-				+0.3
3,641,982	-				+1.0
3,642,062	-				-0.1
3,642,121	+				-0.5
3,642,121	+				+0.0
3,642,121	+				-0.3
3,642,121	+				-0.2
3,642,121	+				+1.1
3,642,121	+				+0.6
3,642,121	+				-0.3
3,642,122	-				-0.5
3,642,123	+				+0.5
3,642,123	+				-1.4
3,642,123	+				+0.2
3,642,123	+				-1.2
3,642,123	+				+0.2
3,642,123	+				+0.5
3,642,123	+				-0.2
3,642,124	-				-0.7
3,642,124	-				+0.6
3,642,124	-				-1.7
3,642,128	-				-0.7
3,642,335	+				+0.1
3,642,373	-				-0.4
3,642,450	+				-0.5
3,642,451	-				+0.0
3,642,465	+				+0.0
3,642,484	-				+0.5
3,642,484	-				-1.8
3,642,526	+				-0.8
3,642,526	+				-0.7
3,642,529	+				-0.4
3,642,529	+				-1.0
3,642,530	-				-0.7
3,642,530	-				-0.4
3,642,540	+				+1.3
3,642,541	-				-0.5
3,642,584	+				-1.4
3,642,617	+				-0.9
3,642,617	+				+1.6
3,642,617	+				-2.5
3,642,620	+				-0.4
3,642,620	+				-0.2
3,642,621	-				+0.3
3,642,621	-				-0.4
3,642,621	-				+0.4
3,642,641	+				+1.5
3,642,641	+				+0.1
3,642,641	+				-0.2
3,642,641	+				+0.7
3,642,642	-				-1.6
3,642,642	-				+1.6
3,642,642	-				+0.3
3,642,642	-				-0.7
3,642,645	+				+0.1
3,642,645	+				-0.8
3,642,645	+				+0.0
3,642,645	+				+2.0
3,642,646	-				+2.6
3,642,646	-				-0.2
3,642,648	-				+0.3
3,642,648	-				-0.6
3,642,687	-				+0.0
3,642,727	+				+2.0
3,642,860	+				+0.1
3,642,861	-				+2.0
3,642,870	+				+1.3
3,642,871	-				-0.3
3,642,913	+				-0.5
3,642,914	-				-0.1
3,642,914	-				-0.8
3,642,973	-				-1.0