Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1955

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
2,294,475	+				+1.5
2,294,476	-				-0.8
2,294,481	-				-0.2
2,294,494	+				+0.5
2,294,495	-				-1.4
2,294,584	-				-0.2
2,294,605	+				-0.3
2,294,605	+				-1.7
2,294,606	-				-0.2
2,294,701	+		Echvi_1954	0.20	-0.3
2,294,702	-		Echvi_1954	0.20	+0.4
2,294,703	+		Echvi_1954	0.21	+0.2
2,294,743	-		Echvi_1954	0.25	+0.9
2,294,782	+		Echvi_1954	0.30	-1.4
2,294,786	-		Echvi_1954	0.30	-1.5
2,294,823	-		Echvi_1954	0.35	+0.5
2,294,879	+		Echvi_1954	0.41	-0.9
2,294,893	+		Echvi_1954	0.43	+0.1
2,294,893	+		Echvi_1954	0.43	+0.1
2,294,893	+		Echvi_1954	0.43	+1.5
2,294,921	-		Echvi_1954	0.46	+0.8
2,294,924	-		Echvi_1954	0.47	-3.1
2,294,977	+		Echvi_1954	0.53	+0.6
2,294,980	+		Echvi_1954	0.53	+0.3
2,294,980	+		Echvi_1954	0.53	+0.4
2,294,980	+		Echvi_1954	0.53	+0.7
2,294,992	+		Echvi_1954	0.55	+0.1
2,295,048	-		Echvi_1954	0.61	+0.2
2,295,087	-		Echvi_1954	0.66	-2.0
2,295,102	+		Echvi_1954	0.68	-0.6
2,295,103	-		Echvi_1954	0.68	+0.2
2,295,136	-		Echvi_1954	0.72	-1.1
2,295,189	+		Echvi_1954	0.78	+1.4
2,295,190	-		Echvi_1954	0.78	-0.5
2,295,307	-				+0.5
2,295,549	+		Echvi_1955	0.14	-0.3
2,295,550	-		Echvi_1955	0.14	-0.6
2,295,567	-		Echvi_1955	0.16	-1.4
2,295,619	+		Echvi_1955	0.22	-1.3
2,295,684	+		Echvi_1955	0.30	+0.2
2,295,684	+		Echvi_1955	0.30	-0.3
2,295,717	-		Echvi_1955	0.33	+0.2
2,295,717	-		Echvi_1955	0.33	-1.0
2,295,758	+		Echvi_1955	0.38	+0.3
2,295,759	-		Echvi_1955	0.38	-0.3
2,295,813	+		Echvi_1955	0.44	-0.8
2,295,931	+		Echvi_1955	0.58	-1.9
2,295,959	-		Echvi_1955	0.61	+0.2
2,295,964	-		Echvi_1955	0.62	-0.3
2,296,048	+		Echvi_1955	0.72	+0.2
2,296,060	+		Echvi_1955	0.73	-0.4
2,296,098	+		Echvi_1955	0.77	-0.6
2,296,098	+		Echvi_1955	0.77	-0.2
2,296,099	-		Echvi_1955	0.77	-0.4
2,296,103	+		Echvi_1955	0.78	-0.7
2,296,104	-		Echvi_1955	0.78	-0.7
2,296,104	-		Echvi_1955	0.78	-1.5
2,296,123	+		Echvi_1955	0.80	-0.0
2,296,125	+		Echvi_1955	0.80	+0.8
2,296,126	-		Echvi_1955	0.81	-2.1
2,296,126	-		Echvi_1955	0.81	+0.1
2,296,126	-		Echvi_1955	0.81	+1.8
2,296,126	-		Echvi_1955	0.81	+0.1
2,296,164	+		Echvi_1955	0.85	+0.6
2,296,200	-		Echvi_1955	0.89	+0.8
2,296,200	-		Echvi_1955	0.89	-0.5
2,296,229	+				+0.1
2,296,297	+				+0.1
2,296,297	+				+0.1
2,296,297	+				-1.7
2,296,298	-				-0.1
2,296,305	+				+0.2
2,296,306	-				+0.6
2,296,319	+				-0.1
2,296,342	-				-0.2
2,296,350	-				-0.6
2,296,356	-				-0.0
2,296,436	-				-0.8
2,296,436	-				+1.0
2,296,477	+				+0.1
2,296,478	-				-0.0
2,296,490	+				+0.5
2,296,490	+				-0.2
2,296,490	+				-0.8
2,296,490	+				-0.1
2,296,490	+				+0.1
2,296,492	+				+0.3
2,296,492	+				-0.7
2,296,493	-				-0.4
2,296,493	-				+0.1
2,296,509	+				-0.5
2,296,510	-				-0.4
2,296,513	+				+0.9
2,296,542	+				+0.3
2,296,555	-				-0.2
2,296,583	-				+1.5
2,296,617	-				+0.1
2,296,628	-				-0.6
2,296,628	-				+0.9
2,296,628	-				-0.4
2,296,628	-				+0.8
2,296,630	-				-0.8
2,296,631	+				-0.1
2,296,631	+				-0.2
2,296,632	-				+1.4
2,296,632	-				+0.2
2,296,634	+				-1.5
2,296,634	+				-0.3
2,296,634	+				+0.4
2,296,635	-				-0.2
2,296,673	+		Echvi_1956	0.11	-1.0
2,296,706	+		Echvi_1956	0.13	-0.2
2,296,726	+		Echvi_1956	0.14	-0.8
2,296,727	-		Echvi_1956	0.14	+0.3
2,296,730	+		Echvi_1956	0.14	-0.6
2,296,732	+		Echvi_1956	0.14	-0.2
2,296,732	+		Echvi_1956	0.14	+0.7
2,296,732	+		Echvi_1956	0.14	+0.5
2,296,733	-		Echvi_1956	0.14	-1.3
2,296,733	-		Echvi_1956	0.14	-1.9
2,296,733	-		Echvi_1956	0.14	-0.2
2,296,761	+		Echvi_1956	0.16	+0.1
2,296,761	+		Echvi_1956	0.16	-0.9
2,296,817	-		Echvi_1956	0.19	+0.2
2,296,840	+		Echvi_1956	0.20	-0.5
2,296,847	-		Echvi_1956	0.20	+1.2
2,296,848	+		Echvi_1956	0.20	-0.6
2,296,849	-		Echvi_1956	0.20	+1.8
2,296,922	+		Echvi_1956	0.24	-2.1
2,296,922	+		Echvi_1956	0.24	+0.9
2,296,923	-		Echvi_1956	0.24	-1.0
2,296,923	-		Echvi_1956	0.24	+0.1
2,296,925	+		Echvi_1956	0.24	+0.5
2,296,926	-		Echvi_1956	0.24	-2.5
2,296,926	-		Echvi_1956	0.24	-0.2
2,296,926	-		Echvi_1956	0.24	-0.4
2,296,926	-		Echvi_1956	0.24	-0.5
2,296,926	-		Echvi_1956	0.24	-1.0
2,296,926	-		Echvi_1956	0.24	-0.7
2,296,927	+				+1.8
2,296,946	+		Echvi_1956	0.25	-0.2
2,296,947	-		Echvi_1956	0.25	+0.8
2,296,947	-		Echvi_1956	0.25	-0.4
2,296,947	-		Echvi_1956	0.25	-1.9
2,296,998	+		Echvi_1956	0.28	-0.0
2,296,999	-		Echvi_1956	0.28	-0.2
2,297,026	-		Echvi_1956	0.29	-1.1
2,297,036	+		Echvi_1956	0.30	+0.2
2,297,040	+		Echvi_1956	0.30	+0.7
2,297,077	+		Echvi_1956	0.32	+1.3
2,297,274	-		Echvi_1956	0.42	+0.1
2,297,274	-		Echvi_1956	0.42	-0.1