Experiment: m.b. Tetracycline 0.06 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_0733 and Echvi_0734 are separated by 353 nucleotides Echvi_0734 and Echvi_0735 are separated by 11 nucleotides
Echvi_0733: Echvi_0733 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 820,204 to 822,126
_0733
Echvi_0734: Echvi_0734 - Phosphoribosylaminoimidazole (AIR) synthetase, at 822,480 to 823,643
_0734
Echvi_0735: Echvi_0735 - Neutral/alkaline non-lysosomal ceramidase., at 823,655 to 824,980
_0735
Position (kb)
822
823
824 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 821.653 kb on + strand, within Echvi_0733 at 821.688 kb on + strand, within Echvi_0733 at 821.724 kb on + strand, within Echvi_0733 at 821.800 kb on + strand, within Echvi_0733 at 821.800 kb on + strand, within Echvi_0733 at 821.800 kb on + strand, within Echvi_0733 at 821.801 kb on - strand, within Echvi_0733 at 821.801 kb on - strand, within Echvi_0733 at 821.801 kb on - strand, within Echvi_0733 at 821.801 kb on - strand, within Echvi_0733 at 821.801 kb on - strand, within Echvi_0733 at 821.801 kb on - strand, within Echvi_0733 at 821.803 kb on + strand, within Echvi_0733 at 821.804 kb on - strand, within Echvi_0733 at 821.843 kb on + strand, within Echvi_0733 at 821.843 kb on + strand, within Echvi_0733 at 821.853 kb on + strand, within Echvi_0733 at 821.900 kb on + strand, within Echvi_0733 at 821.900 kb on + strand, within Echvi_0733 at 821.935 kb on + strand at 821.936 kb on - strand at 821.936 kb on - strand at 821.940 kb on + strand at 821.941 kb on - strand at 821.976 kb on - strand at 821.980 kb on + strand at 821.980 kb on + strand at 821.980 kb on + strand at 821.981 kb on - strand at 821.981 kb on - strand at 821.981 kb on - strand at 821.981 kb on - strand at 821.981 kb on - strand at 821.981 kb on - strand at 821.982 kb on + strand at 821.983 kb on - strand at 821.983 kb on - strand at 821.983 kb on - strand at 821.983 kb on - strand at 821.997 kb on + strand at 822.094 kb on - strand at 822.103 kb on - strand at 822.158 kb on - strand at 822.160 kb on - strand at 822.160 kb on - strand at 822.160 kb on - strand at 822.164 kb on + strand at 822.165 kb on - strand at 822.243 kb on - strand at 822.243 kb on - strand at 822.256 kb on + strand at 822.294 kb on - strand at 822.301 kb on + strand at 822.301 kb on + strand at 822.302 kb on - strand at 822.395 kb on + strand at 822.395 kb on + strand at 822.396 kb on - strand at 822.423 kb on + strand at 822.426 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Tetracycline 0.06 mg/ml remove 821,653 + Echvi_0733 0.75 +0.5 821,688 + Echvi_0733 0.77 -1.2 821,724 + Echvi_0733 0.79 +0.2 821,800 + Echvi_0733 0.83 +0.0 821,800 + Echvi_0733 0.83 +0.2 821,800 + Echvi_0733 0.83 +0.5 821,801 - Echvi_0733 0.83 +0.7 821,801 - Echvi_0733 0.83 +0.9 821,801 - Echvi_0733 0.83 +0.8 821,801 - Echvi_0733 0.83 +0.2 821,801 - Echvi_0733 0.83 +1.3 821,801 - Echvi_0733 0.83 +1.2 821,803 + Echvi_0733 0.83 -1.4 821,804 - Echvi_0733 0.83 +0.4 821,843 + Echvi_0733 0.85 +1.4 821,843 + Echvi_0733 0.85 -0.3 821,853 + Echvi_0733 0.86 +0.0 821,900 + Echvi_0733 0.88 +0.1 821,900 + Echvi_0733 0.88 +0.4 821,935 + -1.2 821,936 - +3.5 821,936 - -1.4 821,940 + -0.5 821,941 - -0.4 821,976 - +0.5 821,980 + +0.3 821,980 + +0.0 821,980 + -0.1 821,981 - -0.5 821,981 - +0.5 821,981 - +0.5 821,981 - -0.3 821,981 - +1.1 821,981 - +0.2 821,982 + +0.1 821,983 - +0.1 821,983 - +0.7 821,983 - +0.1 821,983 - -0.7 821,997 + -0.3 822,094 - +2.9 822,103 - +0.3 822,158 - +0.5 822,160 - +0.4 822,160 - +1.0 822,160 - +0.0 822,164 + +0.5 822,165 - -0.1 822,243 - +0.8 822,243 - -0.3 822,256 + -0.4 822,294 - +0.5 822,301 + +0.6 822,301 + -1.3 822,302 - -2.1 822,395 + -0.1 822,395 + +0.9 822,396 - +0.5 822,423 + -1.4 822,426 - +0.9
Or see this region's nucleotide sequence