Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0218

Experiment: m.b. Tetracycline 0.06 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Tetracycline 0.06 mg/ml
236,309	+		Echvi_0217	0.36	+0.0
236,310	-		Echvi_0217	0.36	-0.8
236,310	-		Echvi_0217	0.36	-1.3
236,310	-		Echvi_0217	0.36	+0.0
236,311	+		Echvi_0217	0.36	-0.4
236,311	+		Echvi_0217	0.36	-0.9
236,312	-		Echvi_0217	0.37	-0.9
236,328	+		Echvi_0217	0.39	-0.8
236,328	+		Echvi_0217	0.39	+0.2
236,328	+		Echvi_0217	0.39	+0.6
236,329	-		Echvi_0217	0.39	+1.8
236,329	-		Echvi_0217	0.39	-2.4
236,329	-		Echvi_0217	0.39	+0.0
236,372	-		Echvi_0217	0.44	-0.2
236,468	+		Echvi_0217	0.56	+0.0
236,597	+		Echvi_0217	0.72	-0.2
236,622	-		Echvi_0217	0.75	+1.2
236,746	+				-1.3
236,747	-				-1.3
236,747	-				-0.6
236,833	-				+1.6
236,833	-				+0.8
236,860	-				-1.2
236,928	-				-0.6
236,957	-				-2.1
237,104	+				+0.2
237,104	+				+0.2
237,131	+				+0.6
237,140	+				-0.3
237,140	+				-0.6
237,140	+				-1.2
237,141	-				-0.2
237,144	-				-0.4
237,155	-				+0.9
237,162	+				-0.8
237,181	+				+0.4
237,201	-				+0.2
237,207	+				+0.6
237,317	+				-0.3
237,317	+				+0.2
237,317	+				+0.5
237,321	+				-0.0
237,322	-				+0.9
237,385	+		Echvi_0218	0.14	+1.4
237,393	+		Echvi_0218	0.14	+2.4
237,471	+		Echvi_0218	0.22	-1.7
237,508	+		Echvi_0218	0.25	-1.1
237,508	+		Echvi_0218	0.25	+0.7
237,530	+		Echvi_0218	0.28	-1.1
237,644	+		Echvi_0218	0.39	-0.3
237,698	+		Echvi_0218	0.44	+0.8
237,698	+		Echvi_0218	0.44	-0.9
237,698	+		Echvi_0218	0.44	+0.8
237,794	-		Echvi_0218	0.53	+0.4
237,805	+		Echvi_0218	0.54	+0.3
237,805	+		Echvi_0218	0.54	-0.7
237,805	+		Echvi_0218	0.54	-1.5
237,805	+		Echvi_0218	0.54	+0.2
237,806	-		Echvi_0218	0.54	+1.2
237,833	-		Echvi_0218	0.57	-0.9
237,863	-		Echvi_0218	0.60	-0.3
237,986	-		Echvi_0218	0.71	-1.5
238,047	+		Echvi_0218	0.77	-0.6
238,058	-		Echvi_0218	0.78	-0.0
238,058	-		Echvi_0218	0.78	-0.1
238,059	+		Echvi_0218	0.79	+2.8
238,059	+		Echvi_0218	0.79	-0.3
238,060	-		Echvi_0218	0.79	-0.0
238,212	+				+1.4
238,257	+				+0.5
238,293	-				+1.2
238,323	+				-1.0
238,324	-				+1.1
238,373	-				-0.3
238,431	-				+0.1
238,447	-				-0.8
238,457	+				+0.6
238,457	+				+0.5
238,458	-				-0.9
238,458	-				-1.6
238,459	+				-0.0
238,472	+				+0.0
238,473	-				+2.9
238,491	+				-0.6
238,501	+		Echvi_0219	0.11	+0.2
238,502	-		Echvi_0219	0.12	-0.8
238,557	+		Echvi_0219	0.66	-0.3
238,558	-		Echvi_0219	0.67	+0.3
238,579	+		Echvi_0219	0.87	-0.3
238,579	+		Echvi_0219	0.87	-0.1
238,579	+		Echvi_0219	0.87	-0.2
238,580	-		Echvi_0219	0.88	+0.1
238,607	+				-1.7
238,609	+				-1.3
238,609	+				+1.7
238,610	-				-0.0
238,623	-				+0.1
238,623	-				-1.0
238,629	-				+0.8
238,637	+				-1.2
238,638	-				-0.3
238,638	-				-0.0
238,638	-				-0.9
238,640	+				+0.7
238,640	+				-0.2
238,645	+				+1.0
238,646	-				+0.2
238,659	-				-0.9
238,659	-				-2.0
238,742	+				-0.2
238,762	+				+1.4
238,762	+				+0.3
238,762	+				-0.6