Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4013

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
4,804,613	-		Echvi_4012	0.86	+0.2
4,804,664	+		Echvi_4012	0.90	+1.5
4,804,674	+				-1.0
4,804,675	-				+0.2
4,804,716	+				+0.9
4,804,760	-				-0.4
4,804,760	-				-0.1
4,804,764	+				-0.3
4,804,826	-				-0.5
4,804,827	+				-1.1
4,804,827	+				-0.4
4,804,827	+				+0.3
4,804,827	+				-0.6
4,804,915	+				+1.4
4,804,917	+				+1.1
4,804,917	+				-0.8
4,805,014	-				-2.2
4,805,014	-				-0.4
4,805,036	+				+1.0
4,805,079	-				+0.4
4,805,082	+				+0.5
4,805,154	+				-0.3
4,805,155	-				+0.6
4,805,155	-				+1.5
4,805,196	+				-0.1
4,805,248	-				-1.2
4,805,248	-				-0.1
4,805,270	-				+1.5
4,805,270	-				-0.2
4,805,275	-				+1.2
4,805,319	+				-0.2
4,805,356	+				+0.4
4,805,370	+				-0.2
4,805,370	+				-0.5
4,805,434	-				-0.9
4,805,434	-				-0.8
4,805,437	+				+0.5
4,805,438	-				-0.5
4,805,439	+				+0.5
4,805,513	+				-0.7
4,805,513	+				+1.7
4,805,540	+		Echvi_4013	0.11	-0.1
4,805,541	-		Echvi_4013	0.12	-0.1
4,805,555	-		Echvi_4013	0.14	+0.5
4,805,555	-		Echvi_4013	0.14	-0.5
4,805,561	+		Echvi_4013	0.16	-0.1
4,805,561	+		Echvi_4013	0.16	-0.1
4,805,561	+		Echvi_4013	0.16	-0.1
4,805,567	+		Echvi_4013	0.17	-0.5
4,805,787	+		Echvi_4013	0.63	-0.6
4,805,788	-		Echvi_4013	0.63	+0.2
4,805,788	-		Echvi_4013	0.63	-0.4
4,805,788	-		Echvi_4013	0.63	+0.2
4,805,794	-		Echvi_4013	0.64	+0.1
4,805,813	+		Echvi_4013	0.68	-1.4
4,805,841	+		Echvi_4013	0.74	-0.8
4,805,851	+		Echvi_4013	0.76	-1.0
4,805,852	-		Echvi_4013	0.76	-0.4
4,805,852	-		Echvi_4013	0.76	-0.3
4,805,871	+		Echvi_4013	0.80	-0.5
4,805,871	+		Echvi_4013	0.80	-0.3
4,805,871	+		Echvi_4013	0.80	-0.2
4,805,872	-		Echvi_4013	0.80	-0.2
4,805,872	-		Echvi_4013	0.80	+0.0
4,805,872	-		Echvi_4013	0.80	-0.6
4,805,872	-		Echvi_4013	0.80	+0.0
4,805,893	-		Echvi_4013	0.84	-1.8
4,805,902	+		Echvi_4013	0.86	-1.5
4,805,914	-		Echvi_4013	0.89	-1.1
4,805,920	+				-1.0
4,805,920	+				-0.5
4,805,920	+				+1.5
4,805,921	-				+1.5
4,805,921	-				-0.9
4,805,966	-				-0.3
4,805,996	+				-1.3
4,806,018	-				-0.5
4,806,113	+				+0.1
4,806,113	+				+0.1
4,806,113	+				-0.5
4,806,113	+				+1.2
4,806,114	-				+1.1
4,806,114	-				+0.0
4,806,148	+				+0.1
4,806,149	-				-1.6
4,806,171	-		Echvi_4014	0.11	-0.3
4,806,180	-		Echvi_4014	0.12	+0.0
4,806,180	-		Echvi_4014	0.12	-0.8
4,806,181	+		Echvi_4014	0.12	-0.1
4,806,182	-		Echvi_4014	0.12	+0.1
4,806,182	-		Echvi_4014	0.12	-2.2
4,806,184	+		Echvi_4014	0.12	+1.1
4,806,185	-		Echvi_4014	0.12	+0.7
4,806,217	+		Echvi_4014	0.14	-0.6
4,806,253	-		Echvi_4014	0.17	-0.6
4,806,283	+		Echvi_4014	0.19	+0.1
4,806,283	+		Echvi_4014	0.19	+0.5
4,806,284	-		Echvi_4014	0.19	-0.2
4,806,404	+		Echvi_4014	0.27	+0.7
4,806,404	+		Echvi_4014	0.27	-0.4
4,806,405	-		Echvi_4014	0.27	-1.4
4,806,409	-		Echvi_4014	0.27	-1.6
4,806,436	+		Echvi_4014	0.29	-1.7
4,806,437	-		Echvi_4014	0.29	-0.6
4,806,607	-		Echvi_4014	0.41	-0.2
4,806,634	+		Echvi_4014	0.42	+0.5
4,806,667	+		Echvi_4014	0.45	-0.1
4,806,668	-		Echvi_4014	0.45	+0.5
4,806,730	+		Echvi_4014	0.49	+0.5
4,806,862	-		Echvi_4014	0.58	+0.4
4,806,940	-		Echvi_4014	0.63	-0.9
4,806,944	+		Echvi_4014	0.63	-0.1
4,806,944	+		Echvi_4014	0.63	+0.1
4,806,945	-		Echvi_4014	0.63	-1.6