Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3948

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
4,730,131	-		Echvi_3947	0.53	-1.1
4,730,237	-		Echvi_3947	0.59	-0.8
4,730,243	-		Echvi_3947	0.60	-0.9
4,730,253	+				-0.5
4,730,254	-		Echvi_3947	0.61	-0.4
4,730,367	-		Echvi_3947	0.67	+0.0
4,730,405	+		Echvi_3947	0.70	+0.2
4,730,405	+		Echvi_3947	0.70	+0.2
4,730,406	-		Echvi_3947	0.70	+0.3
4,730,409	-		Echvi_3947	0.70	+0.9
4,730,414	-		Echvi_3947	0.70	-0.1
4,730,512	+		Echvi_3947	0.76	+0.7
4,730,603	+		Echvi_3947	0.82	-0.4
4,730,648	+		Echvi_3947	0.84	+1.1
4,730,658	-		Echvi_3947	0.85	-1.5
4,730,728	+		Echvi_3947	0.89	+0.5
4,730,820	-				-0.3
4,730,842	+				-0.7
4,730,843	-				+0.1
4,730,927	+				-0.1
4,730,928	-				+1.2
4,730,981	+				-1.8
4,731,017	-				-0.4
4,731,061	+				-1.3
4,731,062	-				+0.6
4,731,357	+		Echvi_3948	0.15	+1.3
4,731,357	+		Echvi_3948	0.15	+0.1
4,731,358	-		Echvi_3948	0.15	-0.6
4,731,367	+		Echvi_3948	0.16	+0.0
4,731,368	-		Echvi_3948	0.16	+0.9
4,731,368	-		Echvi_3948	0.16	+0.8
4,731,376	+		Echvi_3948	0.16	-0.3
4,731,428	+		Echvi_3948	0.19	+0.3
4,731,502	-		Echvi_3948	0.24	+1.0
4,731,652	-		Echvi_3948	0.32	+0.1
4,731,683	+		Echvi_3948	0.34	-0.4
4,731,755	-		Echvi_3948	0.38	+1.1
4,731,755	-		Echvi_3948	0.38	-0.7
4,731,756	+		Echvi_3948	0.38	+0.2
4,731,756	+		Echvi_3948	0.38	+0.8
4,731,756	+		Echvi_3948	0.38	-0.2
4,731,756	+		Echvi_3948	0.38	-0.5
4,731,756	+		Echvi_3948	0.38	-2.1
4,731,756	+		Echvi_3948	0.38	+0.4
4,731,756	+		Echvi_3948	0.38	-1.1
4,731,757	-		Echvi_3948	0.38	-0.1
4,731,757	-		Echvi_3948	0.38	+0.1
4,731,757	-		Echvi_3948	0.38	-1.3
4,731,824	-		Echvi_3948	0.42	-0.2
4,731,832	-		Echvi_3948	0.42	+0.3
4,731,968	-		Echvi_3948	0.50	-0.6
4,731,968	-		Echvi_3948	0.50	-0.7
4,731,969	+		Echvi_3948	0.50	+0.5
4,731,969	+		Echvi_3948	0.50	+0.3
4,731,969	+		Echvi_3948	0.50	-2.1
4,731,970	-		Echvi_3948	0.50	+0.5
4,731,970	-		Echvi_3948	0.50	+0.9
4,731,970	-		Echvi_3948	0.50	+1.5
4,732,024	-		Echvi_3948	0.53	+0.6
4,732,105	-		Echvi_3948	0.58	+0.5
4,732,263	+		Echvi_3948	0.67	+0.2
4,732,263	+		Echvi_3948	0.67	+0.9
4,732,264	-		Echvi_3948	0.67	-0.1
4,732,264	-		Echvi_3948	0.67	+0.4
4,732,264	-		Echvi_3948	0.67	+2.5
4,732,267	+		Echvi_3948	0.67	+0.4
4,732,268	-		Echvi_3948	0.67	+0.5
4,732,312	+		Echvi_3948	0.70	+0.2
4,732,313	-		Echvi_3948	0.70	+0.1
4,732,313	-		Echvi_3948	0.70	-0.5
4,732,314	+		Echvi_3948	0.70	+0.2
4,732,326	-		Echvi_3948	0.71	+1.3
4,732,345	+		Echvi_3948	0.72	-0.5
4,732,533	+		Echvi_3948	0.83	+0.2
4,732,533	+		Echvi_3948	0.83	+0.9
4,732,534	-		Echvi_3948	0.83	+0.5
4,732,534	-		Echvi_3948	0.83	-0.1
4,732,534	-		Echvi_3948	0.83	+1.3
4,732,541	-		Echvi_3948	0.83	-0.2
4,732,758	+				+0.3
4,732,827	-				-0.1
4,732,870	+				-0.3
4,732,871	-				-0.2
4,732,871	-				-0.2
4,732,871	-				-0.1
4,732,873	+				-0.3
4,732,876	+				-0.7
4,732,876	+				-0.9
4,732,876	+				-0.7
4,732,877	-				-0.6
4,732,877	-				-0.5
4,732,877	-				+0.5
4,733,019	-				-0.5
4,733,046	+				+0.1
4,733,058	+				-0.6
4,733,059	-				-1.8
4,733,070	+				-1.1
4,733,083	+				-3.1
4,733,084	-				+0.1
4,733,085	+				-1.6
4,733,086	-				-2.1
4,733,086	-				+0.1
4,733,090	-				+0.8
4,733,134	+				-0.2
4,733,223	+				+0.6
4,733,224	-				+0.2
4,733,246	-				+1.4
4,733,247	+				-0.1
4,733,255	+				-0.3
4,733,256	-				-0.3
4,733,280	-				+0.0
4,733,290	-				-0.5
4,733,322	+		Echvi_3949	0.11	-0.6
4,733,322	+		Echvi_3949	0.11	+0.5
4,733,322	+		Echvi_3949	0.11	-1.5
4,733,323	-		Echvi_3949	0.11	+0.1
4,733,323	-		Echvi_3949	0.11	-1.3
4,733,323	-		Echvi_3949	0.11	+1.2
4,733,326	+		Echvi_3949	0.12	+1.3
4,733,327	-		Echvi_3949	0.12	+1.1
4,733,327	-		Echvi_3949	0.12	-1.8
4,733,377	+		Echvi_3949	0.18	-0.8
4,733,379	+		Echvi_3949	0.18	-0.5
4,733,379	+		Echvi_3949	0.18	+0.5
4,733,379	+		Echvi_3949	0.18	+0.3
4,733,379	+		Echvi_3949	0.18	+0.1
4,733,380	-		Echvi_3949	0.18	-0.2
4,733,404	+		Echvi_3949	0.21	-1.9
4,733,408	-		Echvi_3949	0.21	+0.1
4,733,425	-		Echvi_3949	0.23	+0.4
4,733,428	-		Echvi_3949	0.23	-0.6
4,733,436	+		Echvi_3949	0.24	+0.8
4,733,437	-		Echvi_3949	0.24	-0.4
4,733,521	+		Echvi_3949	0.34	+0.1
4,733,641	+		Echvi_3949	0.48	+0.8
4,733,660	+		Echvi_3949	0.50	+0.1
4,733,660	+		Echvi_3949	0.50	+0.9
4,733,688	+		Echvi_3949	0.53	-0.6
4,733,688	+		Echvi_3949	0.53	+0.1
4,733,688	+		Echvi_3949	0.53	-0.8
4,733,689	-		Echvi_3949	0.53	+0.2
4,733,715	-		Echvi_3949	0.56	+0.5
4,733,737	+		Echvi_3949	0.59	+0.2
4,733,771	+		Echvi_3949	0.62	-0.2
4,733,771	+		Echvi_3949	0.62	-2.2
4,733,771	+		Echvi_3949	0.62	+0.2
4,733,772	-		Echvi_3949	0.63	-0.3
4,733,772	-		Echvi_3949	0.63	-0.7
4,733,772	-		Echvi_3949	0.63	-0.9
4,733,773	+		Echvi_3949	0.63	+0.1
4,733,775	+		Echvi_3949	0.63	-0.0
4,733,775	+		Echvi_3949	0.63	-1.1
4,733,775	+		Echvi_3949	0.63	-0.9
4,733,776	-		Echvi_3949	0.63	-2.5
4,733,776	-		Echvi_3949	0.63	-1.1
4,733,776	-		Echvi_3949	0.63	-0.5
4,733,776	-		Echvi_3949	0.63	+0.4
4,733,776	-		Echvi_3949	0.63	-0.9
4,733,776	-		Echvi_3949	0.63	+0.7
4,733,776	-		Echvi_3949	0.63	+0.8
4,733,776	-		Echvi_3949	0.63	-0.5
4,733,776	-		Echvi_3949	0.63	-0.2
4,733,791	-		Echvi_3949	0.65	-0.2
4,733,810	-		Echvi_3949	0.67	-2.3
4,733,812	+		Echvi_3949	0.67	+0.1
4,733,812	+		Echvi_3949	0.67	-0.3
4,733,812	+		Echvi_3949	0.67	+1.0
4,733,813	-		Echvi_3949	0.67	+0.5
4,733,813	-		Echvi_3949	0.67	+0.2
4,733,813	-		Echvi_3949	0.67	+0.0
4,733,813	-		Echvi_3949	0.67	+0.0
4,733,831	-		Echvi_3949	0.69	+0.1
4,733,831	-		Echvi_3949	0.69	+0.5