Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_3359

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
3,965,151	+				+0.4
3,965,197	+				+0.8
3,965,197	+				-0.6
3,965,198	-				+0.4
3,965,203	-				+0.1
3,965,208	+				-0.4
3,965,209	-				-1.3
3,965,216	+				+0.2
3,965,216	+				-0.2
3,965,217	-				+2.3
3,965,236	-				+0.7
3,965,349	-		Echvi_3357	0.23	+1.7
3,965,349	-		Echvi_3357	0.23	-0.3
3,965,349	-		Echvi_3357	0.23	+0.1
3,965,349	-		Echvi_3357	0.23	-0.6
3,965,349	-		Echvi_3357	0.23	-0.9
3,965,365	-		Echvi_3357	0.26	-0.7
3,965,386	-		Echvi_3357	0.29	+0.8
3,965,386	-		Echvi_3357	0.29	+0.1
3,965,397	+		Echvi_3357	0.31	-1.0
3,965,398	-		Echvi_3357	0.31	-0.6
3,965,398	-		Echvi_3357	0.31	+0.4
3,965,399	+		Echvi_3357	0.31	-0.3
3,965,399	+		Echvi_3357	0.31	+0.3
3,965,400	-		Echvi_3357	0.32	+1.7
3,965,422	-		Echvi_3357	0.35	+0.4
3,965,423	+		Echvi_3357	0.35	-0.1
3,965,432	+		Echvi_3357	0.37	-1.1
3,965,433	-		Echvi_3357	0.37	-1.6
3,965,467	-		Echvi_3357	0.43	-0.5
3,965,484	+		Echvi_3357	0.45	-0.1
3,965,485	-		Echvi_3357	0.46	-0.3
3,965,546	+		Echvi_3357	0.56	+0.3
3,965,547	-		Echvi_3357	0.56	+0.1
3,965,634	+		Echvi_3357	0.70	+0.9
3,965,634	+		Echvi_3357	0.70	+1.2
3,965,634	+		Echvi_3357	0.70	+0.0
3,965,635	-		Echvi_3357	0.70	-0.3
3,965,689	+		Echvi_3357	0.79	+0.1
3,965,715	+		Echvi_3357	0.83	+0.9
3,965,716	-		Echvi_3357	0.84	-0.8
3,965,716	-		Echvi_3357	0.84	+0.4
3,965,791	-				-1.4
3,965,919	+		Echvi_3358	0.56	-2.3
3,965,920	-		Echvi_3358	0.57	-0.6
3,965,920	-		Echvi_3358	0.57	-0.7
3,965,960	+				-0.6
3,965,960	+				-0.0
3,965,960	+				+0.1
3,966,079	+				+1.2
3,966,972	+				+1.6
3,966,973	-				+0.7
3,967,017	-				+0.8
3,967,020	+				-1.7
3,967,021	-				-1.3
3,967,078	-				+0.9
3,967,143	+				-0.4
3,967,143	+				+0.2
3,967,159	-				+0.1
3,967,159	-				+2.2
3,967,218	+				+0.2
3,967,218	+				-0.6
3,967,221	-				+0.3
3,967,227	+				+0.7
3,967,336	-		Echvi_3360	0.10	+0.2
3,967,336	-		Echvi_3360	0.10	-1.0
3,967,359	+		Echvi_3360	0.13	+1.1
3,967,359	+		Echvi_3360	0.13	+0.8
3,967,359	+		Echvi_3360	0.13	-0.4
3,967,359	+		Echvi_3360	0.13	-0.7
3,967,359	+		Echvi_3360	0.13	+0.9
3,967,359	+		Echvi_3360	0.13	-0.5
3,967,360	-		Echvi_3360	0.13	-0.7
3,967,366	-		Echvi_3360	0.14	-1.4
3,967,366	-		Echvi_3360	0.14	-0.5
3,967,366	-		Echvi_3360	0.14	-1.4
3,967,468	+		Echvi_3360	0.26	-0.8
3,967,469	-		Echvi_3360	0.26	-0.5
3,967,469	-		Echvi_3360	0.26	+0.5
3,967,469	-		Echvi_3360	0.26	-0.6
3,967,469	-		Echvi_3360	0.26	-0.4
3,967,472	+		Echvi_3360	0.26	-0.1
3,967,473	-		Echvi_3360	0.27	-1.7
3,967,473	-		Echvi_3360	0.27	+1.4
3,967,503	-		Echvi_3360	0.30	-3.0
3,967,533	-		Echvi_3360	0.34	-0.6
3,967,644	+		Echvi_3360	0.47	-0.1
3,967,644	+				+1.0
3,967,816	-		Echvi_3360	0.67	+1.4
3,967,840	+		Echvi_3360	0.70	+1.4
3,967,841	-		Echvi_3360	0.70	-0.1
3,967,874	+		Echvi_3360	0.74	-0.5
3,967,875	-		Echvi_3360	0.74	+0.4
3,967,893	+		Echvi_3360	0.76	-0.8
3,967,893	+		Echvi_3360	0.76	+0.5
3,967,894	-		Echvi_3360	0.77	-0.0
3,967,895	+		Echvi_3360	0.77	-0.4
3,967,896	-		Echvi_3360	0.77	-0.5
3,967,906	+		Echvi_3360	0.78	+0.9
3,967,906	+		Echvi_3360	0.78	+0.4
3,967,907	-		Echvi_3360	0.78	-0.8