Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2950

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
3,526,912	-				+0.3
3,526,912	-				+1.0
3,526,954	-		Echvi_2949	0.11	-1.2
3,527,131	-		Echvi_2949	0.29	-1.1
3,527,294	+		Echvi_2949	0.45	+0.5
3,527,294	+		Echvi_2949	0.45	-0.1
3,527,307	+		Echvi_2949	0.47	-0.4
3,527,307	+		Echvi_2949	0.47	-1.1
3,527,325	+		Echvi_2949	0.48	+0.4
3,527,326	-		Echvi_2949	0.49	+0.5
3,527,399	+		Echvi_2949	0.56	+0.5
3,527,404	-		Echvi_2949	0.56	+0.4
3,527,404	-		Echvi_2949	0.56	+0.6
3,527,464	+		Echvi_2949	0.62	+0.5
3,527,470	+		Echvi_2949	0.63	+0.6
3,527,548	+		Echvi_2949	0.71	+0.5
3,527,608	+		Echvi_2949	0.77	-0.7
3,527,608	+		Echvi_2949	0.77	-0.1
3,527,608	+		Echvi_2949	0.77	-1.8
3,527,609	-		Echvi_2949	0.77	+0.2
3,527,835	+				-0.2
3,527,837	+				-1.0
3,527,950	+		Echvi_2950	0.32	-0.3
3,527,951	-		Echvi_2950	0.32	+0.1
3,528,011	-		Echvi_2950	0.50	-0.5
3,528,011	-		Echvi_2950	0.50	-1.2
3,528,011	-		Echvi_2950	0.50	-0.8
3,528,011	-		Echvi_2950	0.50	-0.3
3,528,014	+		Echvi_2950	0.51	+0.4
3,528,015	-		Echvi_2950	0.51	+0.5
3,528,022	+		Echvi_2950	0.53	+0.5
3,528,072	+		Echvi_2950	0.68	+0.5
3,528,072	+		Echvi_2950	0.68	+0.1
3,528,073	-		Echvi_2950	0.68	-1.6
3,528,073	-		Echvi_2950	0.68	+1.7
3,528,073	-		Echvi_2950	0.68	+0.7
3,528,081	-		Echvi_2950	0.71	-1.1
3,528,197	-				+1.1
3,528,224	+				-0.1
3,528,224	+				-3.2
3,528,224	+				-0.1
3,528,225	-				-1.3
3,528,225	-				-0.9
3,528,227	-				-0.3
3,528,227	-				-0.5
3,528,232	-				-0.2
3,528,244	-				-0.5
3,528,299	-				+0.1
3,528,309	-				-0.8
3,528,321	-				+1.4
3,528,348	+				-0.1
3,528,421	+				-0.6
3,528,421	+				-0.3
3,528,493	+				+0.5
3,528,544	-				-2.1