Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2022

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
2,378,237	+		Echvi_2021	0.64	-0.3
2,378,237	+		Echvi_2021	0.64	+0.0
2,378,301	+		Echvi_2021	0.67	+1.6
2,378,516	-		Echvi_2021	0.76	-0.5
2,378,570	+		Echvi_2021	0.79	+0.8
2,378,621	+		Echvi_2021	0.81	+0.3
2,378,621	+		Echvi_2021	0.81	-0.3
2,378,621	+		Echvi_2021	0.81	+0.6
2,378,622	-		Echvi_2021	0.81	+0.5
2,378,622	-		Echvi_2021	0.81	-0.7
2,378,624	+		Echvi_2021	0.81	+0.3
2,378,624	+		Echvi_2021	0.81	-1.2
2,378,624	+		Echvi_2021	0.81	-1.0
2,378,625	-		Echvi_2021	0.82	+0.0
2,378,625	-		Echvi_2021	0.82	+1.1
2,378,625	-		Echvi_2021	0.82	+1.5
2,378,625	-		Echvi_2021	0.82	+0.5
2,378,625	-		Echvi_2021	0.82	-0.2
2,378,734	+		Echvi_2021	0.87	-0.4
2,378,747	+		Echvi_2021	0.87	-0.0
2,378,747	+		Echvi_2021	0.87	-1.0
2,378,861	+				+0.2
2,378,861	+				-0.4
2,378,957	+				+0.0
2,378,957	+				-1.9
2,378,957	+				-0.1
2,378,958	-				+1.0
2,378,958	-				-1.0
2,379,002	+				+0.2
2,379,030	-				+0.5
2,379,030	-				-0.9
2,379,032	-				+0.8
2,379,032	-				+0.9
2,379,032	-				-0.7
2,379,032	-				-0.3
2,379,039	-				+1.0
2,379,039	-				+0.8
2,379,039	-				+1.0
2,379,050	+				-0.1
2,379,051	-				+1.2
2,379,051	-				-0.4
2,379,094	+				+1.6
2,379,095	-				+1.0
2,379,123	+				-0.6
2,379,123	+				-0.1
2,379,124	-				+0.1
2,379,152	+				-0.3
2,379,158	+				+0.0
2,379,158	+				+0.8
2,379,159	-				-0.7
2,379,246	-				+0.7
2,379,248	-				-0.2
2,379,312	+		Echvi_2022	0.14	-0.4
2,379,312	+		Echvi_2022	0.14	+0.0
2,379,312	+		Echvi_2022	0.14	-0.2
2,379,313	-		Echvi_2022	0.14	+0.5
2,379,313	-		Echvi_2022	0.14	+0.6
2,379,344	+		Echvi_2022	0.17	+1.0
2,379,344	+		Echvi_2022	0.17	+0.2
2,379,344	+		Echvi_2022	0.17	-0.8
2,379,344	+		Echvi_2022	0.17	+0.7
2,379,344	+		Echvi_2022	0.17	-0.4
2,379,345	-		Echvi_2022	0.17	-1.0
2,379,347	+		Echvi_2022	0.17	-0.7
2,379,353	+		Echvi_2022	0.17	-1.8
2,379,357	+		Echvi_2022	0.18	-0.2
2,379,368	+		Echvi_2022	0.19	+0.6
2,379,368	+		Echvi_2022	0.19	-1.5
2,379,394	-		Echvi_2022	0.21	+0.3
2,379,394	-		Echvi_2022	0.21	+0.7
2,379,441	-		Echvi_2022	0.25	+0.2
2,379,446	+		Echvi_2022	0.26	-0.9
2,379,447	-		Echvi_2022	0.26	-0.6
2,379,450	-		Echvi_2022	0.26	+1.2
2,379,474	-		Echvi_2022	0.29	+0.6
2,379,516	-		Echvi_2022	0.32	+0.4
2,379,570	-		Echvi_2022	0.37	+0.0
2,379,592	+		Echvi_2022	0.39	+1.1
2,379,662	-		Echvi_2022	0.46	+0.6
2,379,722	+		Echvi_2022	0.51	-0.2
2,379,729	-		Echvi_2022	0.52	+1.3
2,379,731	+		Echvi_2022	0.52	-0.8
2,379,757	+		Echvi_2022	0.55	+0.3
2,379,763	+		Echvi_2022	0.55	-0.8
2,379,773	-		Echvi_2022	0.56	+0.6
2,379,821	-		Echvi_2022	0.61	+0.0
2,379,834	+		Echvi_2022	0.62	+1.5
2,379,865	+		Echvi_2022	0.65	-0.8
2,379,866	-		Echvi_2022	0.65	+0.7
2,379,886	-		Echvi_2022	0.67	+0.2
2,379,886	-		Echvi_2022	0.67	-0.1
2,379,915	+		Echvi_2022	0.69	+0.1
2,379,916	-		Echvi_2022	0.69	+0.4
2,379,916	-		Echvi_2022	0.69	+0.3
2,380,010	+		Echvi_2022	0.78	+0.2
2,380,045	-		Echvi_2022	0.81	+0.2
2,380,073	+		Echvi_2022	0.84	+0.3
2,380,089	-		Echvi_2022	0.85	-0.2
2,380,146	+				-1.6
2,380,147	-				+0.7
2,380,148	+				-0.7
2,380,149	-				-0.4
2,380,149	-				-0.6
2,380,216	+				+0.9
2,380,217	-				-0.7
2,380,234	+				+0.5
2,380,234	+				-0.2
2,380,234	+				-1.5
2,380,284	-				-1.8
2,380,429	+				-0.7
2,380,459	+				-2.5
2,380,464	+				+0.5
2,380,464	+				+0.0
2,380,467	-				+0.0
2,380,484	+				+0.3
2,380,485	-				-1.4
2,380,666	-				+0.1
2,380,672	-				+0.2
2,380,672	-				+1.2
2,380,729	+				+0.3
2,380,730	-				+0.8
2,380,730	-				-0.4
2,380,821	+				-0.9
2,380,821	+				-1.0
2,380,822	-				-0.1
2,380,822	-				+0.1
2,380,887	+		Echvi_2023	0.10	+0.4
2,381,013	+		Echvi_2023	0.13	+1.2
2,381,013	+		Echvi_2023	0.13	+0.0