Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0902

Experiment: m.b. Chloramphenicol 0.005 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Chloramphenicol 0.005 mg/ml
1,027,188	-		Echvi_0901	0.47	-0.0
1,027,188	-		Echvi_0901	0.47	+0.7
1,027,188	-		Echvi_0901	0.47	+1.4
1,027,199	-		Echvi_0901	0.48	-0.3
1,027,199	-		Echvi_0901	0.48	-1.0
1,027,284	-		Echvi_0901	0.53	-0.6
1,027,306	-		Echvi_0901	0.54	+0.4
1,027,357	+		Echvi_0901	0.57	-0.2
1,027,358	-		Echvi_0901	0.57	+0.6
1,027,358	-		Echvi_0901	0.57	+0.4
1,027,530	-		Echvi_0901	0.68	-0.1
1,027,608	+		Echvi_0901	0.73	-0.7
1,027,609	-		Echvi_0901	0.73	-0.3
1,027,609	-		Echvi_0901	0.73	+0.5
1,027,683	+		Echvi_0901	0.78	-0.8
1,027,683	+		Echvi_0901	0.78	+0.4
1,027,706	+		Echvi_0901	0.79	+0.3
1,027,706	+		Echvi_0901	0.79	-2.1
1,027,706	+		Echvi_0901	0.79	+0.2
1,027,706	+		Echvi_0901	0.79	+1.6
1,027,706	+		Echvi_0901	0.79	-0.6
1,027,706	+		Echvi_0901	0.79	+0.6
1,027,706	+		Echvi_0901	0.79	-0.8
1,027,706	+		Echvi_0901	0.79	+0.4
1,027,706	+		Echvi_0901	0.79	-1.4
1,027,706	+		Echvi_0901	0.79	-0.6
1,027,707	-		Echvi_0901	0.79	-0.9
1,027,707	-		Echvi_0901	0.79	+0.3
1,027,707	-		Echvi_0901	0.79	-0.3
1,027,707	-		Echvi_0901	0.79	+0.2
1,027,939	-				-0.1
1,027,939	-				+0.1
1,027,947	+				-2.0
1,027,981	-				+0.4
1,027,999	+				-0.8
1,028,000	-				+0.0
1,028,000	-				-0.4
1,028,040	-				+2.1
1,028,049	+				+0.6
1,028,250	+				-1.0
1,028,250	+				-0.2
1,028,287	+		Echvi_0902	0.11	+1.4
1,028,288	-		Echvi_0902	0.11	+0.4
1,028,331	+		Echvi_0902	0.14	+0.5
1,028,332	-		Echvi_0902	0.14	+0.3
1,028,341	-		Echvi_0902	0.15	-0.8
1,028,343	+		Echvi_0902	0.15	+0.8
1,028,344	-		Echvi_0902	0.15	-0.4
1,028,344	-		Echvi_0902	0.15	+1.5
1,028,344	-				+1.8
1,028,344	-		Echvi_0902	0.15	+0.8
1,028,344	-		Echvi_0902	0.15	-1.7
1,028,344	-		Echvi_0902	0.15	+1.8
1,028,346	+		Echvi_0902	0.15	-0.4
1,028,347	-		Echvi_0902	0.15	+0.8
1,028,497	-		Echvi_0902	0.24	-0.6
1,028,507	-		Echvi_0902	0.25	-0.7
1,028,508	+		Echvi_0902	0.25	+1.1
1,028,508	+		Echvi_0902	0.25	-0.4
1,028,508	+		Echvi_0902	0.25	-2.3
1,028,508	+		Echvi_0902	0.25	-0.5
1,028,508	+		Echvi_0902	0.25	-0.3
1,028,508	+		Echvi_0902	0.25	-0.7
1,028,508	+		Echvi_0902	0.25	-0.2
1,028,509	-		Echvi_0902	0.25	-2.6
1,028,509	-		Echvi_0902	0.25	+0.7
1,028,509	-		Echvi_0902	0.25	+0.3
1,028,509	-		Echvi_0902	0.25	-1.5
1,028,509	-		Echvi_0902	0.25	-1.7
1,028,509	-		Echvi_0902	0.25	+1.7
1,028,509	-		Echvi_0902	0.25	+0.3
1,028,509	-		Echvi_0902	0.25	-0.2
1,028,598	+		Echvi_0902	0.31	+1.4
1,028,615	+		Echvi_0902	0.32	-0.5
1,028,615	+		Echvi_0902	0.32	-0.2
1,028,615	+		Echvi_0902	0.32	-1.6
1,028,616	-		Echvi_0902	0.32	+0.2
1,028,694	+		Echvi_0902	0.37	+0.3
1,028,694	+		Echvi_0902	0.37	-0.2
1,028,702	+		Echvi_0902	0.37	-0.3
1,028,704	+		Echvi_0902	0.37	-0.7
1,028,738	-		Echvi_0902	0.40	+0.1
1,028,738	-		Echvi_0902	0.40	-0.4
1,028,738	-		Echvi_0902	0.40	-0.3
1,028,739	+		Echvi_0902	0.40	+3.6
1,028,739	+		Echvi_0902	0.40	-0.2
1,028,740	-		Echvi_0902	0.40	-1.8
1,028,834	+		Echvi_0902	0.46	-0.1
1,028,834	+		Echvi_0902	0.46	-0.0
1,028,839	+		Echvi_0902	0.46	+0.6
1,028,839	+		Echvi_0902	0.46	+1.0
1,028,839	+		Echvi_0902	0.46	+1.5
1,028,839	+		Echvi_0902	0.46	+0.5
1,028,840	-		Echvi_0902	0.46	+0.7
1,028,840	-		Echvi_0902	0.46	-0.4
1,028,959	+		Echvi_0902	0.53	+0.9
1,028,960	-		Echvi_0902	0.53	-0.3
1,029,014	+		Echvi_0902	0.57	-0.1
1,029,015	-		Echvi_0902	0.57	+1.0
1,029,015	-		Echvi_0902	0.57	+1.8
1,029,015	-		Echvi_0902	0.57	-0.3
1,029,015	-		Echvi_0902	0.57	+0.1
1,029,015	-		Echvi_0902	0.57	+0.3
1,029,018	+		Echvi_0902	0.57	-0.5
1,029,018	+		Echvi_0902	0.57	-1.4
1,029,019	-		Echvi_0902	0.57	+1.1
1,029,019	-		Echvi_0902	0.57	+0.6
1,029,019	-		Echvi_0902	0.57	+0.8
1,029,115	-		Echvi_0902	0.63	+0.5
1,029,189	+		Echvi_0902	0.68	+0.5
1,029,190	-		Echvi_0902	0.68	-0.2
1,029,190	-		Echvi_0902	0.68	-1.7
1,029,190	-		Echvi_0902	0.68	-0.3
1,029,241	-		Echvi_0902	0.71	-2.7
1,029,241	-		Echvi_0902	0.71	-1.5
1,029,241	-		Echvi_0902	0.71	+1.1
1,029,265	+		Echvi_0902	0.73	+0.2
1,029,265	+		Echvi_0902	0.73	-0.5
1,029,298	+		Echvi_0902	0.75	+2.4
1,029,299	-		Echvi_0902	0.75	-0.3
1,029,312	+		Echvi_0902	0.76	+1.2
1,029,312	+		Echvi_0902	0.76	-1.2
1,029,331	+				+2.3
1,029,331	+		Echvi_0902	0.77	+0.2
1,029,331	+		Echvi_0902	0.77	+0.3
1,029,390	+		Echvi_0902	0.80	-0.4
1,029,391	-		Echvi_0902	0.81	-0.8
1,029,391	-		Echvi_0902	0.81	+1.1
1,029,394	+		Echvi_0902	0.81	+0.3
1,029,394	+		Echvi_0902	0.81	-0.1
1,029,394	+		Echvi_0902	0.81	+2.2
1,029,455	-		Echvi_0902	0.85	+1.6
1,029,469	-		Echvi_0902	0.85	-1.6
1,029,489	+		Echvi_0902	0.87	+0.4
1,029,527	-		Echvi_0902	0.89	-0.4
1,029,608	-				-0.2
1,029,608	-				-1.1
1,029,608	-				-0.2
1,029,622	+				+0.4
1,029,623	-				+1.8
1,029,700	+				-0.9
1,029,801	-				-0.6
1,029,824	+				-0.8
1,029,824	+				+0.3
1,029,824	+				-1.1
1,029,825	-				-2.2
1,029,825	-				+0.8
1,029,825	-				+1.8
1,029,825	-				-0.4
1,029,825	-				-0.9
1,029,879	-		Echvi_0903	0.10	+0.2
1,029,892	+		Echvi_0903	0.12	+1.2
1,029,892	+		Echvi_0903	0.12	-0.2
1,029,892	+		Echvi_0903	0.12	+0.2
1,029,892	+		Echvi_0903	0.12	+0.4
1,029,892	+		Echvi_0903	0.12	-0.3
1,029,892	+		Echvi_0903	0.12	-0.6
1,029,893	-		Echvi_0903	0.12	+0.5
1,029,893	-		Echvi_0903	0.12	-1.9
1,029,893	-		Echvi_0903	0.12	+1.2
1,029,893	-		Echvi_0903	0.12	+1.5
1,029,903	+		Echvi_0903	0.13	+0.8
1,029,927	+		Echvi_0903	0.15	-0.3
1,030,030	-		Echvi_0903	0.26	-0.8
1,030,030	-		Echvi_0903	0.26	-2.1
1,030,080	+		Echvi_0903	0.31	-0.1
1,030,080	+		Echvi_0903	0.31	+0.3
1,030,080	+		Echvi_0903	0.31	+0.7
1,030,080	+		Echvi_0903	0.31	-0.1
1,030,080	+		Echvi_0903	0.31	-1.0
1,030,081	-		Echvi_0903	0.31	+0.4
1,030,081	-		Echvi_0903	0.31	+0.2
1,030,081	-		Echvi_0903	0.31	-1.0
1,030,081	-		Echvi_0903	0.31	+1.1
1,030,082	+		Echvi_0903	0.31	+0.7
1,030,083	-		Echvi_0903	0.31	+0.3
1,030,266	+		Echvi_0903	0.49	+0.4
1,030,278	+		Echvi_0903	0.51	-2.0
1,030,299	+		Echvi_0903	0.53	+0.7
1,030,300	-		Echvi_0903	0.53	-0.4
1,030,310	+		Echvi_0903	0.54	+1.0
1,030,353	-		Echvi_0903	0.58	-0.7
1,030,353	-		Echvi_0903	0.58	+0.1
1,030,396	+		Echvi_0903	0.63	+2.4
1,030,396	+		Echvi_0903	0.63	-0.3
1,030,396	+		Echvi_0903	0.63	+1.7
1,030,397	-		Echvi_0903	0.63	-0.5
1,030,397	-		Echvi_0903	0.63	-2.0
1,030,397	-		Echvi_0903	0.63	-1.5
1,030,458	-		Echvi_0903	0.69	-0.3
1,030,476	-		Echvi_0903	0.71	-0.1
1,030,501	-		Echvi_0903	0.73	+0.6
1,030,576	-		Echvi_0903	0.81	+2.8
1,030,633	+		Echvi_0903	0.86	+0.2