Experiment: m.b. Thallium(I) acetate 0.00390625 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt B158DRAFT_1579 and B158DRAFT_1580 are separated by 129 nucleotides B158DRAFT_1580 and B158DRAFT_1581 are separated by 2 nucleotides B158DRAFT_1581 and B158DRAFT_1582 are separated by 108 nucleotides B158DRAFT_1582 and B158DRAFT_1583 are separated by 87 nucleotides
B158DRAFT_1579: B158DRAFT_1579 - 2,4-dienoyl-CoA reductase (EC 1.3.1.34), at 1,638,404 to 1,640,425
_1579
B158DRAFT_1580: B158DRAFT_1580 - hypothetical protein, at 1,640,555 to 1,640,707
_1580
B158DRAFT_1581: B158DRAFT_1581 - diguanylate cyclase (GGDEF) domain, at 1,640,710 to 1,642,599
_1581
B158DRAFT_1582: B158DRAFT_1582 - channel protein, hemolysin III family, at 1,642,708 to 1,643,403
_1582
B158DRAFT_1583: B158DRAFT_1583 - diguanylate cyclase, at 1,643,491 to 1,644,963
_1583
Position (kb)
1640
1641
1642
1643 Strain fitness (log2 ratio)
-2
-1
0
1 at 1639.727 kb on + strand, within B158DRAFT_1579 at 1639.735 kb on - strand, within B158DRAFT_1579 at 1639.735 kb on - strand, within B158DRAFT_1579 at 1639.735 kb on - strand, within B158DRAFT_1579 at 1639.735 kb on - strand, within B158DRAFT_1579 at 1639.787 kb on + strand, within B158DRAFT_1579 at 1639.901 kb on + strand, within B158DRAFT_1579 at 1639.926 kb on + strand, within B158DRAFT_1579 at 1639.926 kb on + strand, within B158DRAFT_1579 at 1639.926 kb on + strand, within B158DRAFT_1579 at 1639.934 kb on + strand, within B158DRAFT_1579 at 1639.942 kb on - strand, within B158DRAFT_1579 at 1639.970 kb on + strand, within B158DRAFT_1579 at 1640.083 kb on - strand, within B158DRAFT_1579 at 1640.168 kb on - strand, within B158DRAFT_1579 at 1640.225 kb on + strand at 1640.291 kb on + strand at 1640.301 kb on - strand at 1640.360 kb on - strand at 1640.377 kb on - strand at 1640.379 kb on - strand at 1640.396 kb on - strand at 1640.526 kb on - strand at 1640.539 kb on + strand at 1640.551 kb on + strand at 1640.551 kb on + strand at 1640.598 kb on + strand, within B158DRAFT_1580 at 1640.606 kb on - strand, within B158DRAFT_1580 at 1640.606 kb on - strand, within B158DRAFT_1580 at 1640.620 kb on - strand, within B158DRAFT_1580 at 1640.620 kb on - strand, within B158DRAFT_1580 at 1640.844 kb on - strand at 1640.924 kb on - strand, within B158DRAFT_1581 at 1640.964 kb on - strand, within B158DRAFT_1581 at 1640.989 kb on - strand, within B158DRAFT_1581 at 1640.989 kb on - strand, within B158DRAFT_1581 at 1641.238 kb on - strand, within B158DRAFT_1581 at 1641.250 kb on + strand, within B158DRAFT_1581 at 1641.250 kb on + strand, within B158DRAFT_1581 at 1641.250 kb on + strand, within B158DRAFT_1581 at 1641.258 kb on - strand, within B158DRAFT_1581 at 1641.258 kb on - strand, within B158DRAFT_1581 at 1641.261 kb on + strand, within B158DRAFT_1581 at 1641.295 kb on - strand, within B158DRAFT_1581 at 1641.385 kb on + strand, within B158DRAFT_1581 at 1641.393 kb on - strand, within B158DRAFT_1581 at 1641.447 kb on + strand, within B158DRAFT_1581 at 1641.447 kb on + strand, within B158DRAFT_1581 at 1641.447 kb on + strand, within B158DRAFT_1581 at 1641.447 kb on + strand, within B158DRAFT_1581 at 1641.455 kb on - strand, within B158DRAFT_1581 at 1641.455 kb on - strand, within B158DRAFT_1581 at 1641.455 kb on - strand, within B158DRAFT_1581 at 1641.475 kb on - strand, within B158DRAFT_1581 at 1641.485 kb on - strand, within B158DRAFT_1581 at 1641.491 kb on - strand, within B158DRAFT_1581 at 1641.555 kb on + strand, within B158DRAFT_1581 at 1641.590 kb on - strand, within B158DRAFT_1581 at 1641.598 kb on - strand, within B158DRAFT_1581 at 1641.600 kb on - strand, within B158DRAFT_1581 at 1641.629 kb on + strand, within B158DRAFT_1581 at 1641.652 kb on + strand, within B158DRAFT_1581 at 1641.698 kb on + strand, within B158DRAFT_1581 at 1641.698 kb on + strand, within B158DRAFT_1581 at 1641.706 kb on - strand, within B158DRAFT_1581 at 1641.718 kb on - strand, within B158DRAFT_1581 at 1641.722 kb on + strand, within B158DRAFT_1581 at 1641.723 kb on + strand, within B158DRAFT_1581 at 1641.760 kb on + strand, within B158DRAFT_1581 at 1641.760 kb on + strand, within B158DRAFT_1581 at 1641.768 kb on - strand, within B158DRAFT_1581 at 1641.768 kb on - strand, within B158DRAFT_1581 at 1641.800 kb on - strand, within B158DRAFT_1581 at 1641.808 kb on - strand, within B158DRAFT_1581 at 1641.856 kb on + strand, within B158DRAFT_1581 at 1641.863 kb on + strand, within B158DRAFT_1581 at 1641.864 kb on - strand, within B158DRAFT_1581 at 1641.864 kb on - strand, within B158DRAFT_1581 at 1641.869 kb on - strand, within B158DRAFT_1581 at 1641.930 kb on - strand, within B158DRAFT_1581 at 1641.938 kb on - strand, within B158DRAFT_1581 at 1641.946 kb on - strand, within B158DRAFT_1581 at 1641.946 kb on - strand, within B158DRAFT_1581 at 1641.981 kb on + strand, within B158DRAFT_1581 at 1641.983 kb on + strand, within B158DRAFT_1581 at 1641.983 kb on + strand, within B158DRAFT_1581 at 1641.991 kb on - strand, within B158DRAFT_1581 at 1642.026 kb on - strand, within B158DRAFT_1581 at 1642.064 kb on - strand, within B158DRAFT_1581 at 1642.097 kb on + strand, within B158DRAFT_1581 at 1642.141 kb on - strand, within B158DRAFT_1581 at 1642.227 kb on + strand, within B158DRAFT_1581 at 1642.277 kb on - strand, within B158DRAFT_1581 at 1642.308 kb on + strand, within B158DRAFT_1581 at 1642.477 kb on + strand at 1642.478 kb on + strand at 1642.478 kb on + strand at 1642.479 kb on - strand at 1642.486 kb on - strand at 1642.496 kb on + strand at 1642.496 kb on + strand at 1642.504 kb on + strand at 1642.504 kb on - strand at 1642.504 kb on - strand at 1642.506 kb on + strand at 1642.511 kb on + strand at 1642.511 kb on + strand at 1642.511 kb on + strand at 1642.521 kb on + strand at 1642.546 kb on - strand at 1642.548 kb on + strand at 1642.567 kb on + strand at 1642.588 kb on + strand at 1642.606 kb on - strand at 1642.606 kb on - strand at 1642.641 kb on + strand at 1642.654 kb on + strand at 1642.683 kb on + strand at 1642.696 kb on - strand at 1642.696 kb on - strand at 1642.727 kb on + strand at 1642.727 kb on + strand at 1642.727 kb on + strand at 1642.727 kb on + strand at 1642.735 kb on - strand at 1642.737 kb on + strand at 1642.737 kb on + strand at 1642.807 kb on + strand, within B158DRAFT_1582 at 1642.807 kb on + strand, within B158DRAFT_1582 at 1642.807 kb on + strand, within B158DRAFT_1582 at 1642.814 kb on - strand, within B158DRAFT_1582 at 1642.815 kb on - strand, within B158DRAFT_1582 at 1642.815 kb on - strand, within B158DRAFT_1582 at 1642.815 kb on - strand, within B158DRAFT_1582 at 1642.820 kb on + strand, within B158DRAFT_1582 at 1642.826 kb on + strand, within B158DRAFT_1582 at 1642.838 kb on + strand, within B158DRAFT_1582 at 1642.846 kb on - strand, within B158DRAFT_1582 at 1642.860 kb on - strand, within B158DRAFT_1582 at 1642.863 kb on + strand, within B158DRAFT_1582 at 1642.863 kb on + strand, within B158DRAFT_1582 at 1642.871 kb on - strand, within B158DRAFT_1582 at 1642.871 kb on - strand, within B158DRAFT_1582 at 1642.912 kb on - strand, within B158DRAFT_1582 at 1642.973 kb on - strand, within B158DRAFT_1582 at 1643.000 kb on + strand, within B158DRAFT_1582 at 1643.000 kb on + strand, within B158DRAFT_1582 at 1643.000 kb on + strand, within B158DRAFT_1582 at 1643.000 kb on + strand, within B158DRAFT_1582 at 1643.008 kb on - strand, within B158DRAFT_1582 at 1643.008 kb on - strand, within B158DRAFT_1582 at 1643.047 kb on - strand, within B158DRAFT_1582 at 1643.063 kb on + strand, within B158DRAFT_1582 at 1643.072 kb on - strand, within B158DRAFT_1582 at 1643.074 kb on + strand, within B158DRAFT_1582 at 1643.074 kb on + strand, within B158DRAFT_1582 at 1643.082 kb on - strand, within B158DRAFT_1582 at 1643.177 kb on + strand, within B158DRAFT_1582 at 1643.177 kb on + strand, within B158DRAFT_1582 at 1643.185 kb on - strand, within B158DRAFT_1582 at 1643.196 kb on + strand, within B158DRAFT_1582 at 1643.240 kb on - strand, within B158DRAFT_1582 at 1643.274 kb on + strand, within B158DRAFT_1582 at 1643.277 kb on - strand, within B158DRAFT_1582 at 1643.277 kb on - strand, within B158DRAFT_1582 at 1643.282 kb on - strand, within B158DRAFT_1582 at 1643.282 kb on - strand, within B158DRAFT_1582 at 1643.335 kb on - strand at 1643.353 kb on - strand at 1643.365 kb on + strand at 1643.373 kb on + strand at 1643.445 kb on + strand at 1643.445 kb on + strand at 1643.453 kb on - strand at 1643.453 kb on - strand at 1643.481 kb on - strand at 1643.486 kb on + strand at 1643.501 kb on + strand at 1643.509 kb on - strand at 1643.569 kb on - strand at 1643.569 kb on - strand at 1643.569 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.00390625 mg/ml remove 1,639,727 + B158DRAFT_1579 0.65 -0.2 1,639,735 - B158DRAFT_1579 0.66 -0.2 1,639,735 - B158DRAFT_1579 0.66 -0.4 1,639,735 - B158DRAFT_1579 0.66 +0.4 1,639,735 - B158DRAFT_1579 0.66 +0.2 1,639,787 + B158DRAFT_1579 0.68 +0.4 1,639,901 + B158DRAFT_1579 0.74 -0.1 1,639,926 + B158DRAFT_1579 0.75 -0.1 1,639,926 + B158DRAFT_1579 0.75 -0.2 1,639,926 + B158DRAFT_1579 0.75 +0.1 1,639,934 + B158DRAFT_1579 0.76 -0.2 1,639,942 - B158DRAFT_1579 0.76 +0.1 1,639,970 + B158DRAFT_1579 0.77 +0.1 1,640,083 - B158DRAFT_1579 0.83 +0.4 1,640,168 - B158DRAFT_1579 0.87 -0.6 1,640,225 + -0.1 1,640,291 + -0.4 1,640,301 - +0.1 1,640,360 - +0.4 1,640,377 - -0.4 1,640,379 - -0.4 1,640,396 - -0.8 1,640,526 - -0.2 1,640,539 + -0.4 1,640,551 + -0.3 1,640,551 + -0.5 1,640,598 + B158DRAFT_1580 0.28 -0.3 1,640,606 - B158DRAFT_1580 0.33 +0.2 1,640,606 - B158DRAFT_1580 0.33 +0.2 1,640,620 - B158DRAFT_1580 0.42 +0.0 1,640,620 - B158DRAFT_1580 0.42 -0.7 1,640,844 - -0.2 1,640,924 - B158DRAFT_1581 0.11 -0.8 1,640,964 - B158DRAFT_1581 0.13 +0.1 1,640,989 - B158DRAFT_1581 0.15 -0.4 1,640,989 - B158DRAFT_1581 0.15 +0.3 1,641,238 - B158DRAFT_1581 0.28 -0.4 1,641,250 + B158DRAFT_1581 0.29 -0.1 1,641,250 + B158DRAFT_1581 0.29 -0.8 1,641,250 + B158DRAFT_1581 0.29 -0.0 1,641,258 - B158DRAFT_1581 0.29 +0.2 1,641,258 - B158DRAFT_1581 0.29 +0.4 1,641,261 + B158DRAFT_1581 0.29 -0.0 1,641,295 - B158DRAFT_1581 0.31 +0.1 1,641,385 + B158DRAFT_1581 0.36 -0.4 1,641,393 - B158DRAFT_1581 0.36 +0.0 1,641,447 + B158DRAFT_1581 0.39 +0.2 1,641,447 + B158DRAFT_1581 0.39 -0.1 1,641,447 + B158DRAFT_1581 0.39 -0.2 1,641,447 + B158DRAFT_1581 0.39 -0.8 1,641,455 - B158DRAFT_1581 0.39 +0.2 1,641,455 - B158DRAFT_1581 0.39 +0.5 1,641,455 - B158DRAFT_1581 0.39 +0.4 1,641,475 - B158DRAFT_1581 0.40 +0.1 1,641,485 - B158DRAFT_1581 0.41 -0.3 1,641,491 - B158DRAFT_1581 0.41 +0.5 1,641,555 + B158DRAFT_1581 0.45 +0.3 1,641,590 - B158DRAFT_1581 0.47 -0.3 1,641,598 - B158DRAFT_1581 0.47 -0.9 1,641,600 - B158DRAFT_1581 0.47 +0.7 1,641,629 + B158DRAFT_1581 0.49 -1.1 1,641,652 + B158DRAFT_1581 0.50 -1.8 1,641,698 + B158DRAFT_1581 0.52 +0.2 1,641,698 + B158DRAFT_1581 0.52 -0.8 1,641,706 - B158DRAFT_1581 0.53 +0.7 1,641,718 - B158DRAFT_1581 0.53 +0.5 1,641,722 + B158DRAFT_1581 0.54 +0.9 1,641,723 + B158DRAFT_1581 0.54 +0.1 1,641,760 + B158DRAFT_1581 0.56 +0.2 1,641,760 + B158DRAFT_1581 0.56 -0.4 1,641,768 - B158DRAFT_1581 0.56 -0.2 1,641,768 - B158DRAFT_1581 0.56 +0.0 1,641,800 - B158DRAFT_1581 0.58 +0.4 1,641,808 - B158DRAFT_1581 0.58 +0.1 1,641,856 + B158DRAFT_1581 0.61 -0.1 1,641,863 + B158DRAFT_1581 0.61 +0.2 1,641,864 - B158DRAFT_1581 0.61 -0.3 1,641,864 - B158DRAFT_1581 0.61 -0.1 1,641,869 - B158DRAFT_1581 0.61 -0.3 1,641,930 - B158DRAFT_1581 0.65 -0.2 1,641,938 - B158DRAFT_1581 0.65 +0.3 1,641,946 - B158DRAFT_1581 0.65 -0.4 1,641,946 - B158DRAFT_1581 0.65 +0.9 1,641,981 + B158DRAFT_1581 0.67 +0.1 1,641,983 + B158DRAFT_1581 0.67 -0.0 1,641,983 + B158DRAFT_1581 0.67 -0.4 1,641,991 - B158DRAFT_1581 0.68 -0.6 1,642,026 - B158DRAFT_1581 0.70 -1.8 1,642,064 - B158DRAFT_1581 0.72 -0.5 1,642,097 + B158DRAFT_1581 0.73 +0.1 1,642,141 - B158DRAFT_1581 0.76 +0.2 1,642,227 + B158DRAFT_1581 0.80 -0.3 1,642,277 - B158DRAFT_1581 0.83 +0.3 1,642,308 + B158DRAFT_1581 0.85 -0.4 1,642,477 + -0.4 1,642,478 + -0.2 1,642,478 + -0.2 1,642,479 - -0.3 1,642,486 - -0.3 1,642,496 + -0.5 1,642,496 + -0.6 1,642,504 + -0.9 1,642,504 - -0.4 1,642,504 - -0.6 1,642,506 + -0.3 1,642,511 + +0.0 1,642,511 + -1.5 1,642,511 + -0.9 1,642,521 + -0.1 1,642,546 - -0.2 1,642,548 + +1.4 1,642,567 + -0.5 1,642,588 + -0.0 1,642,606 - -0.1 1,642,606 - -0.3 1,642,641 + -0.3 1,642,654 + -1.0 1,642,683 + -1.1 1,642,696 - -0.9 1,642,696 - +0.6 1,642,727 + +0.2 1,642,727 + +0.6 1,642,727 + -0.1 1,642,727 + +0.4 1,642,735 - -0.3 1,642,737 + -0.7 1,642,737 + -0.7 1,642,807 + B158DRAFT_1582 0.14 -0.9 1,642,807 + B158DRAFT_1582 0.14 -0.8 1,642,807 + B158DRAFT_1582 0.14 -1.1 1,642,814 - B158DRAFT_1582 0.15 -0.0 1,642,815 - B158DRAFT_1582 0.15 +0.1 1,642,815 - B158DRAFT_1582 0.15 -1.4 1,642,815 - B158DRAFT_1582 0.15 +0.1 1,642,820 + B158DRAFT_1582 0.16 -0.0 1,642,826 + B158DRAFT_1582 0.17 -0.5 1,642,838 + B158DRAFT_1582 0.19 -0.2 1,642,846 - B158DRAFT_1582 0.20 -0.6 1,642,860 - B158DRAFT_1582 0.22 -0.3 1,642,863 + B158DRAFT_1582 0.22 -0.7 1,642,863 + B158DRAFT_1582 0.22 +0.1 1,642,871 - B158DRAFT_1582 0.23 -0.2 1,642,871 - B158DRAFT_1582 0.23 -0.6 1,642,912 - B158DRAFT_1582 0.29 -0.4 1,642,973 - B158DRAFT_1582 0.38 -0.3 1,643,000 + B158DRAFT_1582 0.42 -0.1 1,643,000 + B158DRAFT_1582 0.42 -0.2 1,643,000 + B158DRAFT_1582 0.42 -0.6 1,643,000 + B158DRAFT_1582 0.42 -0.1 1,643,008 - B158DRAFT_1582 0.43 -0.8 1,643,008 - B158DRAFT_1582 0.43 -1.9 1,643,047 - B158DRAFT_1582 0.49 +0.1 1,643,063 + B158DRAFT_1582 0.51 -0.3 1,643,072 - B158DRAFT_1582 0.52 +0.2 1,643,074 + B158DRAFT_1582 0.53 +0.2 1,643,074 + B158DRAFT_1582 0.53 +0.0 1,643,082 - B158DRAFT_1582 0.54 +0.3 1,643,177 + B158DRAFT_1582 0.67 -0.4 1,643,177 + B158DRAFT_1582 0.67 +0.0 1,643,185 - B158DRAFT_1582 0.69 -0.1 1,643,196 + B158DRAFT_1582 0.70 +0.2 1,643,240 - B158DRAFT_1582 0.76 +0.3 1,643,274 + B158DRAFT_1582 0.81 -0.4 1,643,277 - B158DRAFT_1582 0.82 -0.0 1,643,277 - B158DRAFT_1582 0.82 +0.0 1,643,282 - B158DRAFT_1582 0.82 -0.4 1,643,282 - B158DRAFT_1582 0.82 +0.1 1,643,335 - +0.0 1,643,353 - +0.0 1,643,365 + +0.9 1,643,373 + -0.1 1,643,445 + -0.5 1,643,445 + -0.2 1,643,453 - +0.1 1,643,453 - -0.4 1,643,481 - +0.1 1,643,486 + +0.4 1,643,501 + -0.1 1,643,509 - +0.2 1,643,569 - -0.1 1,643,569 - +0.4 1,643,569 - +0.3
Or see this region's nucleotide sequence