Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1298

Experiment: m.b. Thallium(I) acetate 0.00390625 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_1296 and B158DRAFT_1297 overlap by 4 nucleotidesB158DRAFT_1297 and B158DRAFT_1298 are separated by 13 nucleotidesB158DRAFT_1298 and B158DRAFT_1299 overlap by 13 nucleotides B158DRAFT_1296: B158DRAFT_1296 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,342,582 to 1,343,367 _1296 B158DRAFT_1297: B158DRAFT_1297 - [LSU ribosomal protein L3P]-glutamine N5-methyltransferase (EC 2.1.1.-), at 1,343,364 to 1,344,278 _1297 B158DRAFT_1298: B158DRAFT_1298 - Uncharacterized protein conserved in bacteria, at 1,344,292 to 1,344,837 _1298 B158DRAFT_1299: B158DRAFT_1299 - Uncharacterized conserved protein, at 1,344,825 to 1,345,946 _1299 Position (kb) 1344 1345Strain fitness (log2 ratio) -4 -3 -2 -1 0 1at 1343.303 kb on + strandat 1343.311 kb on - strandat 1343.389 kb on + strandat 1343.394 kb on + strandat 1343.397 kb on - strandat 1343.457 kb on + strand, within B158DRAFT_1297at 1343.465 kb on - strand, within B158DRAFT_1297at 1343.465 kb on - strand, within B158DRAFT_1297at 1343.465 kb on - strand, within B158DRAFT_1297at 1343.481 kb on + strand, within B158DRAFT_1297at 1343.487 kb on + strand, within B158DRAFT_1297at 1343.495 kb on - strand, within B158DRAFT_1297at 1343.500 kb on - strand, within B158DRAFT_1297at 1343.514 kb on - strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.545 kb on - strand, within B158DRAFT_1297at 1343.545 kb on - strand, within B158DRAFT_1297at 1343.614 kb on + strand, within B158DRAFT_1297at 1343.622 kb on - strand, within B158DRAFT_1297at 1343.624 kb on + strand, within B158DRAFT_1297at 1343.624 kb on + strand, within B158DRAFT_1297at 1343.624 kb on + strand, within B158DRAFT_1297at 1343.632 kb on - strand, within B158DRAFT_1297at 1343.632 kb on - strand, within B158DRAFT_1297at 1343.724 kb on - strand, within B158DRAFT_1297at 1343.800 kb on + strand, within B158DRAFT_1297at 1343.800 kb on + strand, within B158DRAFT_1297at 1343.805 kb on + strand, within B158DRAFT_1297at 1343.805 kb on + strand, within B158DRAFT_1297at 1343.805 kb on + strand, within B158DRAFT_1297at 1343.813 kb on - strand, within B158DRAFT_1297at 1343.832 kb on - strand, within B158DRAFT_1297at 1343.834 kb on + strand, within B158DRAFT_1297at 1343.869 kb on + strand, within B158DRAFT_1297at 1343.926 kb on - strand, within B158DRAFT_1297at 1343.942 kb on + strand, within B158DRAFT_1297at 1343.964 kb on - strand, within B158DRAFT_1297at 1343.964 kb on - strand, within B158DRAFT_1297at 1343.964 kb on - strand, within B158DRAFT_1297at 1344.066 kb on + strand, within B158DRAFT_1297at 1344.074 kb on - strand, within B158DRAFT_1297at 1344.088 kb on - strand, within B158DRAFT_1297at 1344.111 kb on + strand, within B158DRAFT_1297at 1344.111 kb on + strand, within B158DRAFT_1297at 1344.111 kb on + strand, within B158DRAFT_1297at 1344.119 kb on - strand, within B158DRAFT_1297at 1344.119 kb on - strand, within B158DRAFT_1297at 1344.119 kb on - strand, within B158DRAFT_1297at 1344.126 kb on + strand, within B158DRAFT_1297at 1344.126 kb on + strand, within B158DRAFT_1297at 1344.126 kb on + strand, within B158DRAFT_1297at 1344.134 kb on - strand, within B158DRAFT_1297at 1344.134 kb on - strand, within B158DRAFT_1297at 1344.134 kb on - strand, within B158DRAFT_1297at 1344.134 kb on - strand, within B158DRAFT_1297at 1344.139 kb on - strand, within B158DRAFT_1297at 1344.144 kb on - strand, within B158DRAFT_1297at 1344.158 kb on + strand, within B158DRAFT_1297at 1344.166 kb on - strand, within B158DRAFT_1297at 1344.181 kb on - strand, within B158DRAFT_1297at 1344.187 kb on - strandat 1344.269 kb on - strandat 1344.360 kb on + strand, within B158DRAFT_1298at 1344.360 kb on + strand, within B158DRAFT_1298at 1344.362 kb on + strand, within B158DRAFT_1298at 1344.363 kb on + strand, within B158DRAFT_1298at 1344.371 kb on - strand, within B158DRAFT_1298at 1344.425 kb on - strand, within B158DRAFT_1298at 1344.426 kb on - strand, within B158DRAFT_1298at 1344.432 kb on + strand, within B158DRAFT_1298at 1344.466 kb on + strand, within B158DRAFT_1298at 1344.466 kb on + strand, within B158DRAFT_1298at 1344.466 kb on + strand, within B158DRAFT_1298at 1344.468 kb on + strand, within B158DRAFT_1298at 1344.485 kb on + strand, within B158DRAFT_1298at 1344.486 kb on + strand, within B158DRAFT_1298at 1344.493 kb on - strand, within B158DRAFT_1298at 1344.493 kb on - strand, within B158DRAFT_1298at 1344.493 kb on - strand, within B158DRAFT_1298at 1344.493 kb on - strand, within B158DRAFT_1298at 1344.534 kb on + strand, within B158DRAFT_1298at 1344.541 kb on + strand, within B158DRAFT_1298at 1344.541 kb on + strand, within B158DRAFT_1298at 1344.646 kb on - strand, within B158DRAFT_1298at 1344.725 kb on + strand, within B158DRAFT_1298at 1344.770 kb on - strand, within B158DRAFT_1298at 1344.771 kb on + strand, within B158DRAFT_1298at 1344.779 kb on - strand, within B158DRAFT_1298at 1344.793 kb on + strandat 1344.793 kb on + strandat 1344.801 kb on - strandat 1344.801 kb on - strandat 1344.926 kb on - strandat 1344.948 kb on - strand, within B158DRAFT_1299at 1345.018 kb on + strand, within B158DRAFT_1299at 1345.077 kb on - strand, within B158DRAFT_1299at 1345.096 kb on - strand, within B158DRAFT_1299at 1345.103 kb on + strand, within B158DRAFT_1299at 1345.103 kb on + strand, within B158DRAFT_1299at 1345.106 kb on - strand, within B158DRAFT_1299at 1345.106 kb on - strand, within B158DRAFT_1299at 1345.106 kb on - strand, within B158DRAFT_1299at 1345.169 kb on + strand, within B158DRAFT_1299at 1345.209 kb on + strand, within B158DRAFT_1299at 1345.211 kb on - strand, within B158DRAFT_1299at 1345.212 kb on - strand, within B158DRAFT_1299at 1345.218 kb on + strand, within B158DRAFT_1299at 1345.270 kb on + strand, within B158DRAFT_1299at 1345.279 kb on - strand, within B158DRAFT_1299at 1345.319 kb on + strand, within B158DRAFT_1299at 1345.327 kb on - strand, within B158DRAFT_1299at 1345.336 kb on - strand, within B158DRAFT_1299at 1345.431 kb on + strand, within B158DRAFT_1299at 1345.460 kb on + strand, within B158DRAFT_1299at 1345.481 kb on + strand, within B158DRAFT_1299at 1345.489 kb on - strand, within B158DRAFT_1299at 1345.489 kb on - strand, within B158DRAFT_1299at 1345.492 kb on + strand, within B158DRAFT_1299at 1345.503 kb on - strand, within B158DRAFT_1299at 1345.550 kb on - strand, within B158DRAFT_1299at 1345.629 kb on - strand, within B158DRAFT_1299at 1345.630 kb on + strand, within B158DRAFT_1299at 1345.638 kb on - strand, within B158DRAFT_1299at 1345.654 kb on + strand, within B158DRAFT_1299at 1345.662 kb on - strand, within B158DRAFT_1299at 1345.662 kb on - strand, within B158DRAFT_1299at 1345.662 kb on - strand, within B158DRAFT_1299at 1345.685 kb on + strand, within B158DRAFT_1299at 1345.685 kb on + strand, within B158DRAFT_1299at 1345.685 kb on + strand, within B158DRAFT_1299at 1345.685 kb on + strand, within B158DRAFT_1299at 1345.685 kb on + strand, within B158DRAFT_1299at 1345.685 kb on + strand, within B158DRAFT_1299at 1345.685 kb on + strand, within B158DRAFT_1299at 1345.685 kb on + strand, within B158DRAFT_1299at 1345.685 kb on + strand, within B158DRAFT_1299at 1345.685 kb on + strand, within B158DRAFT_1299at 1345.685 kb on + strand, within B158DRAFT_1299at 1345.693 kb on - strand, within B158DRAFT_1299at 1345.693 kb on - strand, within B158DRAFT_1299at 1345.693 kb on - strand, within B158DRAFT_1299at 1345.693 kb on - strand, within B158DRAFT_1299at 1345.693 kb on - strand, within B158DRAFT_1299at 1345.693 kb on - strand, within B158DRAFT_1299at 1345.695 kb on + strand, within B158DRAFT_1299

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.00390625 mg/ml
remove
1,343,303 + -0.9
1,343,311 - -1.2
1,343,389 + -2.7
1,343,394 + -1.1
1,343,397 - -0.9
1,343,457 + B158DRAFT_1297 0.10 -2.1
1,343,465 - B158DRAFT_1297 0.11 -1.8
1,343,465 - B158DRAFT_1297 0.11 -1.5
1,343,465 - B158DRAFT_1297 0.11 -1.0
1,343,481 + B158DRAFT_1297 0.13 -1.0
1,343,487 + B158DRAFT_1297 0.13 -0.7
1,343,495 - B158DRAFT_1297 0.14 -0.3
1,343,500 - B158DRAFT_1297 0.15 -0.7
1,343,514 - B158DRAFT_1297 0.16 -0.3
1,343,537 + B158DRAFT_1297 0.19 -0.6
1,343,537 + B158DRAFT_1297 0.19 -1.1
1,343,537 + B158DRAFT_1297 0.19 -0.6
1,343,537 + B158DRAFT_1297 0.19 -1.4
1,343,537 + B158DRAFT_1297 0.19 -0.5
1,343,537 + B158DRAFT_1297 0.19 -0.4
1,343,545 - B158DRAFT_1297 0.20 -2.1
1,343,545 - B158DRAFT_1297 0.20 -0.5
1,343,614 + B158DRAFT_1297 0.27 -1.0
1,343,622 - B158DRAFT_1297 0.28 -1.7
1,343,624 + B158DRAFT_1297 0.28 -0.9
1,343,624 + B158DRAFT_1297 0.28 -0.2
1,343,624 + B158DRAFT_1297 0.28 -0.7
1,343,632 - B158DRAFT_1297 0.29 -1.6
1,343,632 - B158DRAFT_1297 0.29 +1.0
1,343,724 - B158DRAFT_1297 0.39 -0.5
1,343,800 + B158DRAFT_1297 0.48 -0.7
1,343,800 + B158DRAFT_1297 0.48 -0.7
1,343,805 + B158DRAFT_1297 0.48 -1.1
1,343,805 + B158DRAFT_1297 0.48 -0.4
1,343,805 + B158DRAFT_1297 0.48 -1.7
1,343,813 - B158DRAFT_1297 0.49 -0.8
1,343,832 - B158DRAFT_1297 0.51 -1.4
1,343,834 + B158DRAFT_1297 0.51 -0.1
1,343,869 + B158DRAFT_1297 0.55 -1.2
1,343,926 - B158DRAFT_1297 0.61 -2.5
1,343,942 + B158DRAFT_1297 0.63 -1.1
1,343,964 - B158DRAFT_1297 0.66 -1.3
1,343,964 - B158DRAFT_1297 0.66 -1.4
1,343,964 - B158DRAFT_1297 0.66 -0.1
1,344,066 + B158DRAFT_1297 0.77 -0.1
1,344,074 - B158DRAFT_1297 0.78 -2.3
1,344,088 - B158DRAFT_1297 0.79 -0.7
1,344,111 + B158DRAFT_1297 0.82 -2.9
1,344,111 + B158DRAFT_1297 0.82 -0.7
1,344,111 + B158DRAFT_1297 0.82 -0.7
1,344,119 - B158DRAFT_1297 0.83 -0.7
1,344,119 - B158DRAFT_1297 0.83 -0.2
1,344,119 - B158DRAFT_1297 0.83 -0.7
1,344,126 + B158DRAFT_1297 0.83 -0.3
1,344,126 + B158DRAFT_1297 0.83 -0.3
1,344,126 + B158DRAFT_1297 0.83 -0.7
1,344,134 - B158DRAFT_1297 0.84 -0.6
1,344,134 - B158DRAFT_1297 0.84 -0.6
1,344,134 - B158DRAFT_1297 0.84 -2.3
1,344,134 - B158DRAFT_1297 0.84 -0.7
1,344,139 - B158DRAFT_1297 0.85 -1.1
1,344,144 - B158DRAFT_1297 0.85 -0.9
1,344,158 + B158DRAFT_1297 0.87 +0.8
1,344,166 - B158DRAFT_1297 0.88 -1.1
1,344,181 - B158DRAFT_1297 0.89 -1.3
1,344,187 - -0.6
1,344,269 - +0.0
1,344,360 + B158DRAFT_1298 0.12 +0.4
1,344,360 + B158DRAFT_1298 0.12 -0.5
1,344,362 + B158DRAFT_1298 0.13 -1.1
1,344,363 + B158DRAFT_1298 0.13 -0.1
1,344,371 - B158DRAFT_1298 0.14 -1.2
1,344,425 - B158DRAFT_1298 0.24 -1.5
1,344,426 - B158DRAFT_1298 0.25 -0.4
1,344,432 + B158DRAFT_1298 0.26 -0.7
1,344,466 + B158DRAFT_1298 0.32 -0.2
1,344,466 + B158DRAFT_1298 0.32 -0.8
1,344,466 + B158DRAFT_1298 0.32 -0.1
1,344,468 + B158DRAFT_1298 0.32 +0.5
1,344,485 + B158DRAFT_1298 0.35 -0.5
1,344,486 + B158DRAFT_1298 0.36 -0.3
1,344,493 - B158DRAFT_1298 0.37 -1.0
1,344,493 - B158DRAFT_1298 0.37 -2.5
1,344,493 - B158DRAFT_1298 0.37 -0.6
1,344,493 - B158DRAFT_1298 0.37 -1.0
1,344,534 + B158DRAFT_1298 0.44 +0.1
1,344,541 + B158DRAFT_1298 0.46 +0.5
1,344,541 + B158DRAFT_1298 0.46 -1.1
1,344,646 - B158DRAFT_1298 0.65 -2.6
1,344,725 + B158DRAFT_1298 0.79 -1.2
1,344,770 - B158DRAFT_1298 0.88 -3.7
1,344,771 + B158DRAFT_1298 0.88 +0.2
1,344,779 - B158DRAFT_1298 0.89 -2.3
1,344,793 + -0.1
1,344,793 + -0.6
1,344,801 - -1.1
1,344,801 - -1.2
1,344,926 - -0.3
1,344,948 - B158DRAFT_1299 0.11 -1.3
1,345,018 + B158DRAFT_1299 0.17 +0.7
1,345,077 - B158DRAFT_1299 0.22 -0.7
1,345,096 - B158DRAFT_1299 0.24 -0.4
1,345,103 + B158DRAFT_1299 0.25 -1.8
1,345,103 + B158DRAFT_1299 0.25 -1.3
1,345,106 - B158DRAFT_1299 0.25 -2.0
1,345,106 - B158DRAFT_1299 0.25 -2.5
1,345,106 - B158DRAFT_1299 0.25 -1.3
1,345,169 + B158DRAFT_1299 0.31 -1.4
1,345,209 + B158DRAFT_1299 0.34 -2.3
1,345,211 - B158DRAFT_1299 0.34 -1.1
1,345,212 - B158DRAFT_1299 0.34 -2.1
1,345,218 + B158DRAFT_1299 0.35 -1.5
1,345,270 + B158DRAFT_1299 0.40 -3.1
1,345,279 - B158DRAFT_1299 0.40 -2.5
1,345,319 + B158DRAFT_1299 0.44 -1.9
1,345,327 - B158DRAFT_1299 0.45 -1.3
1,345,336 - B158DRAFT_1299 0.46 -2.3
1,345,431 + B158DRAFT_1299 0.54 -1.4
1,345,460 + B158DRAFT_1299 0.57 -2.9
1,345,481 + B158DRAFT_1299 0.58 +0.1
1,345,489 - B158DRAFT_1299 0.59 -0.4
1,345,489 - B158DRAFT_1299 0.59 -1.3
1,345,492 + B158DRAFT_1299 0.59 -1.5
1,345,503 - B158DRAFT_1299 0.60 -2.0
1,345,550 - B158DRAFT_1299 0.65 -2.8
1,345,629 - B158DRAFT_1299 0.72 -2.8
1,345,630 + B158DRAFT_1299 0.72 -2.8
1,345,638 - B158DRAFT_1299 0.72 -2.3
1,345,654 + B158DRAFT_1299 0.74 -1.6
1,345,662 - B158DRAFT_1299 0.75 -1.5
1,345,662 - B158DRAFT_1299 0.75 -2.3
1,345,662 - B158DRAFT_1299 0.75 -0.4
1,345,685 + B158DRAFT_1299 0.77 -2.4
1,345,685 + B158DRAFT_1299 0.77 -0.9
1,345,685 + B158DRAFT_1299 0.77 -4.5
1,345,685 + B158DRAFT_1299 0.77 -1.6
1,345,685 + B158DRAFT_1299 0.77 -1.7
1,345,685 + B158DRAFT_1299 0.77 -0.6
1,345,685 + B158DRAFT_1299 0.77 -1.8
1,345,685 + B158DRAFT_1299 0.77 -1.5
1,345,685 + B158DRAFT_1299 0.77 -2.3
1,345,685 + B158DRAFT_1299 0.77 -3.5
1,345,685 + B158DRAFT_1299 0.77 -2.8
1,345,693 - B158DRAFT_1299 0.77 -1.0
1,345,693 - B158DRAFT_1299 0.77 -2.4
1,345,693 - B158DRAFT_1299 0.77 -2.2
1,345,693 - B158DRAFT_1299 0.77 -1.8
1,345,693 - B158DRAFT_1299 0.77 -2.2
1,345,693 - B158DRAFT_1299 0.77 -2.2
1,345,695 + B158DRAFT_1299 0.78 -1.8

Or see this region's nucleotide sequence