Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_1296

Experiment: m.b. Thallium(I) acetate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_1294 and B158DRAFT_1295 are separated by 37 nucleotidesB158DRAFT_1295 and B158DRAFT_1296 are separated by 96 nucleotidesB158DRAFT_1296 and B158DRAFT_1297 overlap by 4 nucleotidesB158DRAFT_1297 and B158DRAFT_1298 are separated by 13 nucleotides B158DRAFT_1294: B158DRAFT_1294 - Sugar kinases, ribokinase family, at 1,340,979 to 1,341,986 _1294 B158DRAFT_1295: B158DRAFT_1295 - phosphohistidine phosphatase, SixA, at 1,342,024 to 1,342,485 _1295 B158DRAFT_1296: B158DRAFT_1296 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 1,342,582 to 1,343,367 _1296 B158DRAFT_1297: B158DRAFT_1297 - [LSU ribosomal protein L3P]-glutamine N5-methyltransferase (EC 2.1.1.-), at 1,343,364 to 1,344,278 _1297 B158DRAFT_1298: B158DRAFT_1298 - Uncharacterized protein conserved in bacteria, at 1,344,292 to 1,344,837 _1298 Position (kb) 1342 1343 1344Strain fitness (log2 ratio) -3 -2 -1 0 1at 1341.607 kb on + strand, within B158DRAFT_1294at 1341.649 kb on + strand, within B158DRAFT_1294at 1341.697 kb on + strand, within B158DRAFT_1294at 1341.720 kb on - strand, within B158DRAFT_1294at 1341.790 kb on - strand, within B158DRAFT_1294at 1341.800 kb on - strand, within B158DRAFT_1294at 1341.810 kb on + strand, within B158DRAFT_1294at 1341.810 kb on + strand, within B158DRAFT_1294at 1341.824 kb on - strand, within B158DRAFT_1294at 1341.824 kb on - strand, within B158DRAFT_1294at 1341.841 kb on + strand, within B158DRAFT_1294at 1341.851 kb on + strand, within B158DRAFT_1294at 1341.900 kb on + strandat 1341.919 kb on + strandat 1341.922 kb on - strandat 1341.922 kb on - strandat 1341.922 kb on - strandat 1341.922 kb on - strandat 1341.934 kb on - strandat 1341.958 kb on + strandat 1341.958 kb on + strandat 1341.965 kb on - strandat 1341.966 kb on - strandat 1342.066 kb on + strandat 1342.066 kb on + strandat 1342.152 kb on + strand, within B158DRAFT_1295at 1342.173 kb on + strand, within B158DRAFT_1295at 1342.173 kb on + strand, within B158DRAFT_1295at 1342.181 kb on - strand, within B158DRAFT_1295at 1342.181 kb on - strand, within B158DRAFT_1295at 1342.185 kb on + strand, within B158DRAFT_1295at 1342.200 kb on - strand, within B158DRAFT_1295at 1342.258 kb on - strand, within B158DRAFT_1295at 1342.275 kb on - strand, within B158DRAFT_1295at 1342.301 kb on - strand, within B158DRAFT_1295at 1342.324 kb on + strand, within B158DRAFT_1295at 1342.324 kb on + strand, within B158DRAFT_1295at 1342.327 kb on - strand, within B158DRAFT_1295at 1342.349 kb on + strand, within B158DRAFT_1295at 1342.429 kb on + strand, within B158DRAFT_1295at 1342.454 kb on - strandat 1342.464 kb on - strandat 1342.464 kb on - strandat 1342.466 kb on + strandat 1342.613 kb on - strandat 1342.613 kb on - strandat 1342.623 kb on + strandat 1342.623 kb on + strandat 1342.656 kb on - strandat 1342.684 kb on + strand, within B158DRAFT_1296at 1342.692 kb on - strand, within B158DRAFT_1296at 1342.692 kb on - strand, within B158DRAFT_1296at 1342.757 kb on - strand, within B158DRAFT_1296at 1342.769 kb on + strand, within B158DRAFT_1296at 1342.805 kb on + strand, within B158DRAFT_1296at 1342.809 kb on + strand, within B158DRAFT_1296at 1342.833 kb on + strand, within B158DRAFT_1296at 1342.872 kb on + strand, within B158DRAFT_1296at 1342.904 kb on - strand, within B158DRAFT_1296at 1342.911 kb on + strand, within B158DRAFT_1296at 1342.919 kb on - strand, within B158DRAFT_1296at 1342.974 kb on + strand, within B158DRAFT_1296at 1343.138 kb on + strand, within B158DRAFT_1296at 1343.159 kb on + strand, within B158DRAFT_1296at 1343.164 kb on - strand, within B158DRAFT_1296at 1343.253 kb on + strand, within B158DRAFT_1296at 1343.253 kb on + strand, within B158DRAFT_1296at 1343.286 kb on + strand, within B158DRAFT_1296at 1343.303 kb on + strandat 1343.311 kb on - strandat 1343.389 kb on + strandat 1343.394 kb on + strandat 1343.397 kb on - strandat 1343.457 kb on + strand, within B158DRAFT_1297at 1343.465 kb on - strand, within B158DRAFT_1297at 1343.465 kb on - strand, within B158DRAFT_1297at 1343.465 kb on - strand, within B158DRAFT_1297at 1343.481 kb on + strand, within B158DRAFT_1297at 1343.487 kb on + strand, within B158DRAFT_1297at 1343.495 kb on - strand, within B158DRAFT_1297at 1343.500 kb on - strand, within B158DRAFT_1297at 1343.514 kb on - strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.537 kb on + strand, within B158DRAFT_1297at 1343.545 kb on - strand, within B158DRAFT_1297at 1343.545 kb on - strand, within B158DRAFT_1297at 1343.614 kb on + strand, within B158DRAFT_1297at 1343.622 kb on - strand, within B158DRAFT_1297at 1343.624 kb on + strand, within B158DRAFT_1297at 1343.624 kb on + strand, within B158DRAFT_1297at 1343.624 kb on + strand, within B158DRAFT_1297at 1343.632 kb on - strand, within B158DRAFT_1297at 1343.632 kb on - strand, within B158DRAFT_1297at 1343.724 kb on - strand, within B158DRAFT_1297at 1343.800 kb on + strand, within B158DRAFT_1297at 1343.800 kb on + strand, within B158DRAFT_1297at 1343.805 kb on + strand, within B158DRAFT_1297at 1343.805 kb on + strand, within B158DRAFT_1297at 1343.805 kb on + strand, within B158DRAFT_1297at 1343.813 kb on - strand, within B158DRAFT_1297at 1343.832 kb on - strand, within B158DRAFT_1297at 1343.834 kb on + strand, within B158DRAFT_1297at 1343.869 kb on + strand, within B158DRAFT_1297at 1343.926 kb on - strand, within B158DRAFT_1297at 1343.942 kb on + strand, within B158DRAFT_1297at 1343.964 kb on - strand, within B158DRAFT_1297at 1343.964 kb on - strand, within B158DRAFT_1297at 1343.964 kb on - strand, within B158DRAFT_1297at 1344.066 kb on + strand, within B158DRAFT_1297at 1344.074 kb on - strand, within B158DRAFT_1297at 1344.088 kb on - strand, within B158DRAFT_1297at 1344.111 kb on + strand, within B158DRAFT_1297at 1344.111 kb on + strand, within B158DRAFT_1297at 1344.111 kb on + strand, within B158DRAFT_1297at 1344.119 kb on - strand, within B158DRAFT_1297at 1344.119 kb on - strand, within B158DRAFT_1297at 1344.119 kb on - strand, within B158DRAFT_1297at 1344.126 kb on + strand, within B158DRAFT_1297at 1344.126 kb on + strand, within B158DRAFT_1297at 1344.126 kb on + strand, within B158DRAFT_1297at 1344.134 kb on - strand, within B158DRAFT_1297at 1344.134 kb on - strand, within B158DRAFT_1297at 1344.134 kb on - strand, within B158DRAFT_1297at 1344.134 kb on - strand, within B158DRAFT_1297at 1344.139 kb on - strand, within B158DRAFT_1297at 1344.144 kb on - strand, within B158DRAFT_1297at 1344.158 kb on + strand, within B158DRAFT_1297at 1344.166 kb on - strand, within B158DRAFT_1297at 1344.181 kb on - strand, within B158DRAFT_1297at 1344.187 kb on - strandat 1344.269 kb on - strandat 1344.360 kb on + strand, within B158DRAFT_1298at 1344.360 kb on + strand, within B158DRAFT_1298at 1344.362 kb on + strand, within B158DRAFT_1298at 1344.363 kb on + strand, within B158DRAFT_1298

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.00390625 mg/ml
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1,341,607 + B158DRAFT_1294 0.62 -1.0
1,341,649 + B158DRAFT_1294 0.66 -0.4
1,341,697 + B158DRAFT_1294 0.71 +0.4
1,341,720 - B158DRAFT_1294 0.74 -1.1
1,341,790 - B158DRAFT_1294 0.80 -1.7
1,341,800 - B158DRAFT_1294 0.81 -0.3
1,341,810 + B158DRAFT_1294 0.82 -0.5
1,341,810 + B158DRAFT_1294 0.82 -0.3
1,341,824 - B158DRAFT_1294 0.84 -1.9
1,341,824 - B158DRAFT_1294 0.84 +0.1
1,341,841 + B158DRAFT_1294 0.86 -0.5
1,341,851 + B158DRAFT_1294 0.87 -1.5
1,341,900 + -0.9
1,341,919 + -0.8
1,341,922 - -0.1
1,341,922 - -0.1
1,341,922 - -1.9
1,341,922 - -0.7
1,341,934 - -0.9
1,341,958 + +0.4
1,341,958 + -0.1
1,341,965 - -0.1
1,341,966 - +0.0
1,342,066 + -0.2
1,342,066 + -0.1
1,342,152 + B158DRAFT_1295 0.28 -0.6
1,342,173 + B158DRAFT_1295 0.32 -0.3
1,342,173 + B158DRAFT_1295 0.32 -1.3
1,342,181 - B158DRAFT_1295 0.34 -0.2
1,342,181 - B158DRAFT_1295 0.34 +0.1
1,342,185 + B158DRAFT_1295 0.35 +0.1
1,342,200 - B158DRAFT_1295 0.38 -0.2
1,342,258 - B158DRAFT_1295 0.51 +0.0
1,342,275 - B158DRAFT_1295 0.54 -0.4
1,342,301 - B158DRAFT_1295 0.60 +0.5
1,342,324 + B158DRAFT_1295 0.65 +0.1
1,342,324 + B158DRAFT_1295 0.65 -0.8
1,342,327 - B158DRAFT_1295 0.66 +0.3
1,342,349 + B158DRAFT_1295 0.70 +0.8
1,342,429 + B158DRAFT_1295 0.88 +0.6
1,342,454 - +0.3
1,342,464 - +0.2
1,342,464 - -0.1
1,342,466 + -0.3
1,342,613 - -1.4
1,342,613 - +0.4
1,342,623 + -0.1
1,342,623 + -0.9
1,342,656 - +0.4
1,342,684 + B158DRAFT_1296 0.13 -1.1
1,342,692 - B158DRAFT_1296 0.14 -1.9
1,342,692 - B158DRAFT_1296 0.14 -1.4
1,342,757 - B158DRAFT_1296 0.22 -0.9
1,342,769 + B158DRAFT_1296 0.24 -1.5
1,342,805 + B158DRAFT_1296 0.28 -1.0
1,342,809 + B158DRAFT_1296 0.29 -0.7
1,342,833 + B158DRAFT_1296 0.32 -0.6
1,342,872 + B158DRAFT_1296 0.37 -1.0
1,342,904 - B158DRAFT_1296 0.41 -0.0
1,342,911 + B158DRAFT_1296 0.42 +0.1
1,342,919 - B158DRAFT_1296 0.43 -1.0
1,342,974 + B158DRAFT_1296 0.50 -0.5
1,343,138 + B158DRAFT_1296 0.71 -0.4
1,343,159 + B158DRAFT_1296 0.73 -0.4
1,343,164 - B158DRAFT_1296 0.74 -1.4
1,343,253 + B158DRAFT_1296 0.85 -0.7
1,343,253 + B158DRAFT_1296 0.85 -1.0
1,343,286 + B158DRAFT_1296 0.90 -1.0
1,343,303 + -0.9
1,343,311 - -1.2
1,343,389 + -2.7
1,343,394 + -1.1
1,343,397 - -0.9
1,343,457 + B158DRAFT_1297 0.10 -2.1
1,343,465 - B158DRAFT_1297 0.11 -1.8
1,343,465 - B158DRAFT_1297 0.11 -1.5
1,343,465 - B158DRAFT_1297 0.11 -1.0
1,343,481 + B158DRAFT_1297 0.13 -1.0
1,343,487 + B158DRAFT_1297 0.13 -0.7
1,343,495 - B158DRAFT_1297 0.14 -0.3
1,343,500 - B158DRAFT_1297 0.15 -0.7
1,343,514 - B158DRAFT_1297 0.16 -0.3
1,343,537 + B158DRAFT_1297 0.19 -0.6
1,343,537 + B158DRAFT_1297 0.19 -1.1
1,343,537 + B158DRAFT_1297 0.19 -0.6
1,343,537 + B158DRAFT_1297 0.19 -1.4
1,343,537 + B158DRAFT_1297 0.19 -0.5
1,343,537 + B158DRAFT_1297 0.19 -0.4
1,343,545 - B158DRAFT_1297 0.20 -2.1
1,343,545 - B158DRAFT_1297 0.20 -0.5
1,343,614 + B158DRAFT_1297 0.27 -1.0
1,343,622 - B158DRAFT_1297 0.28 -1.7
1,343,624 + B158DRAFT_1297 0.28 -0.9
1,343,624 + B158DRAFT_1297 0.28 -0.2
1,343,624 + B158DRAFT_1297 0.28 -0.7
1,343,632 - B158DRAFT_1297 0.29 -1.6
1,343,632 - B158DRAFT_1297 0.29 +1.0
1,343,724 - B158DRAFT_1297 0.39 -0.5
1,343,800 + B158DRAFT_1297 0.48 -0.7
1,343,800 + B158DRAFT_1297 0.48 -0.7
1,343,805 + B158DRAFT_1297 0.48 -1.1
1,343,805 + B158DRAFT_1297 0.48 -0.4
1,343,805 + B158DRAFT_1297 0.48 -1.7
1,343,813 - B158DRAFT_1297 0.49 -0.8
1,343,832 - B158DRAFT_1297 0.51 -1.4
1,343,834 + B158DRAFT_1297 0.51 -0.1
1,343,869 + B158DRAFT_1297 0.55 -1.2
1,343,926 - B158DRAFT_1297 0.61 -2.5
1,343,942 + B158DRAFT_1297 0.63 -1.1
1,343,964 - B158DRAFT_1297 0.66 -1.3
1,343,964 - B158DRAFT_1297 0.66 -1.4
1,343,964 - B158DRAFT_1297 0.66 -0.1
1,344,066 + B158DRAFT_1297 0.77 -0.1
1,344,074 - B158DRAFT_1297 0.78 -2.3
1,344,088 - B158DRAFT_1297 0.79 -0.7
1,344,111 + B158DRAFT_1297 0.82 -2.9
1,344,111 + B158DRAFT_1297 0.82 -0.7
1,344,111 + B158DRAFT_1297 0.82 -0.7
1,344,119 - B158DRAFT_1297 0.83 -0.7
1,344,119 - B158DRAFT_1297 0.83 -0.2
1,344,119 - B158DRAFT_1297 0.83 -0.7
1,344,126 + B158DRAFT_1297 0.83 -0.3
1,344,126 + B158DRAFT_1297 0.83 -0.3
1,344,126 + B158DRAFT_1297 0.83 -0.7
1,344,134 - B158DRAFT_1297 0.84 -0.6
1,344,134 - B158DRAFT_1297 0.84 -0.6
1,344,134 - B158DRAFT_1297 0.84 -2.3
1,344,134 - B158DRAFT_1297 0.84 -0.7
1,344,139 - B158DRAFT_1297 0.85 -1.1
1,344,144 - B158DRAFT_1297 0.85 -0.9
1,344,158 + B158DRAFT_1297 0.87 +0.8
1,344,166 - B158DRAFT_1297 0.88 -1.1
1,344,181 - B158DRAFT_1297 0.89 -1.3
1,344,187 - -0.6
1,344,269 - +0.0
1,344,360 + B158DRAFT_1298 0.12 +0.4
1,344,360 + B158DRAFT_1298 0.12 -0.5
1,344,362 + B158DRAFT_1298 0.13 -1.1
1,344,363 + B158DRAFT_1298 0.13 -0.1

Or see this region's nucleotide sequence