Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0559

Experiment: m.b. Thallium(I) acetate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0557 and B158DRAFT_0558 are separated by 202 nucleotidesB158DRAFT_0558 and B158DRAFT_0559 are separated by 11 nucleotidesB158DRAFT_0559 and B158DRAFT_0560 are separated by 153 nucleotides B158DRAFT_0557: B158DRAFT_0557 - Dihydrofolate reductase, at 562,074 to 562,586 _0557 B158DRAFT_0558: B158DRAFT_0558 - sortase, marine proteobacterial type, at 562,789 to 563,358 _0558 B158DRAFT_0559: B158DRAFT_0559 - marine proteobacterial sortase target protein, at 563,370 to 565,430 _0559 B158DRAFT_0560: B158DRAFT_0560 - Uncharacterized protein conserved in bacteria, at 565,584 to 566,294 _0560 Position (kb) 563 564 565 566Strain fitness (log2 ratio) -2 -1 0 1at 562.606 kb on - strandat 562.608 kb on + strandat 562.616 kb on - strandat 562.700 kb on + strandat 562.816 kb on + strandat 562.816 kb on + strandat 562.841 kb on - strandat 562.858 kb on - strand, within B158DRAFT_0558at 562.883 kb on + strand, within B158DRAFT_0558at 562.891 kb on - strand, within B158DRAFT_0558at 562.891 kb on - strand, within B158DRAFT_0558at 562.891 kb on - strand, within B158DRAFT_0558at 562.953 kb on + strand, within B158DRAFT_0558at 562.958 kb on + strand, within B158DRAFT_0558at 562.958 kb on + strand, within B158DRAFT_0558at 562.961 kb on - strand, within B158DRAFT_0558at 562.961 kb on - strand, within B158DRAFT_0558at 562.988 kb on + strand, within B158DRAFT_0558at 562.988 kb on + strand, within B158DRAFT_0558at 562.996 kb on - strand, within B158DRAFT_0558at 563.141 kb on - strand, within B158DRAFT_0558at 563.176 kb on + strand, within B158DRAFT_0558at 563.183 kb on + strand, within B158DRAFT_0558at 563.184 kb on - strand, within B158DRAFT_0558at 563.188 kb on + strand, within B158DRAFT_0558at 563.188 kb on + strand, within B158DRAFT_0558at 563.196 kb on - strand, within B158DRAFT_0558at 563.197 kb on - strand, within B158DRAFT_0558at 563.198 kb on - strand, within B158DRAFT_0558at 563.214 kb on + strand, within B158DRAFT_0558at 563.226 kb on + strand, within B158DRAFT_0558at 563.258 kb on + strand, within B158DRAFT_0558at 563.258 kb on + strand, within B158DRAFT_0558at 563.258 kb on + strand, within B158DRAFT_0558at 563.266 kb on - strand, within B158DRAFT_0558at 563.266 kb on - strand, within B158DRAFT_0558at 563.270 kb on + strand, within B158DRAFT_0558at 563.270 kb on + strand, within B158DRAFT_0558at 563.304 kb on + strandat 563.304 kb on + strandat 563.311 kb on + strandat 563.311 kb on + strandat 563.319 kb on - strandat 563.319 kb on - strandat 563.324 kb on - strandat 563.381 kb on - strandat 563.441 kb on - strandat 563.467 kb on + strandat 563.472 kb on + strandat 563.475 kb on - strandat 563.475 kb on - strandat 563.482 kb on - strandat 563.487 kb on - strandat 563.515 kb on + strandat 563.572 kb on + strandat 563.645 kb on + strand, within B158DRAFT_0559at 563.776 kb on + strand, within B158DRAFT_0559at 563.804 kb on + strand, within B158DRAFT_0559at 563.812 kb on - strand, within B158DRAFT_0559at 563.841 kb on - strand, within B158DRAFT_0559at 563.843 kb on + strand, within B158DRAFT_0559at 563.843 kb on + strand, within B158DRAFT_0559at 563.843 kb on + strand, within B158DRAFT_0559at 563.843 kb on + strand, within B158DRAFT_0559at 563.851 kb on - strand, within B158DRAFT_0559at 563.881 kb on - strand, within B158DRAFT_0559at 563.881 kb on - strand, within B158DRAFT_0559at 563.910 kb on + strand, within B158DRAFT_0559at 563.981 kb on + strand, within B158DRAFT_0559at 563.981 kb on + strand, within B158DRAFT_0559at 563.981 kb on + strand, within B158DRAFT_0559at 564.046 kb on - strand, within B158DRAFT_0559at 564.051 kb on + strand, within B158DRAFT_0559at 564.051 kb on + strand, within B158DRAFT_0559at 564.051 kb on + strand, within B158DRAFT_0559at 564.051 kb on + strand, within B158DRAFT_0559at 564.051 kb on + strand, within B158DRAFT_0559at 564.051 kb on + strand, within B158DRAFT_0559at 564.051 kb on + strand, within B158DRAFT_0559at 564.051 kb on + strand, within B158DRAFT_0559at 564.051 kb on + strand, within B158DRAFT_0559at 564.051 kb on + strand, within B158DRAFT_0559at 564.051 kb on - strand, within B158DRAFT_0559at 564.059 kb on - strand, within B158DRAFT_0559at 564.059 kb on - strand, within B158DRAFT_0559at 564.059 kb on - strand, within B158DRAFT_0559at 564.059 kb on - strand, within B158DRAFT_0559at 564.059 kb on - strand, within B158DRAFT_0559at 564.059 kb on - strand, within B158DRAFT_0559at 564.059 kb on - strand, within B158DRAFT_0559at 564.059 kb on - strand, within B158DRAFT_0559at 564.229 kb on - strand, within B158DRAFT_0559at 564.245 kb on - strand, within B158DRAFT_0559at 564.247 kb on - strand, within B158DRAFT_0559at 564.279 kb on + strand, within B158DRAFT_0559at 564.319 kb on - strand, within B158DRAFT_0559at 564.382 kb on + strand, within B158DRAFT_0559at 564.404 kb on + strand, within B158DRAFT_0559at 564.428 kb on - strand, within B158DRAFT_0559at 564.527 kb on + strand, within B158DRAFT_0559at 564.527 kb on + strand, within B158DRAFT_0559at 564.570 kb on + strand, within B158DRAFT_0559at 564.571 kb on + strand, within B158DRAFT_0559at 564.585 kb on + strand, within B158DRAFT_0559at 564.585 kb on + strand, within B158DRAFT_0559at 564.601 kb on + strand, within B158DRAFT_0559at 564.601 kb on + strand, within B158DRAFT_0559at 564.619 kb on - strand, within B158DRAFT_0559at 564.626 kb on - strand, within B158DRAFT_0559at 564.679 kb on - strand, within B158DRAFT_0559at 564.714 kb on - strand, within B158DRAFT_0559at 564.719 kb on + strand, within B158DRAFT_0559at 564.754 kb on + strand, within B158DRAFT_0559at 564.754 kb on + strand, within B158DRAFT_0559at 564.754 kb on + strand, within B158DRAFT_0559at 564.762 kb on - strand, within B158DRAFT_0559at 564.775 kb on + strand, within B158DRAFT_0559at 564.775 kb on + strand, within B158DRAFT_0559at 564.775 kb on + strand, within B158DRAFT_0559at 564.788 kb on - strand, within B158DRAFT_0559at 564.820 kb on + strand, within B158DRAFT_0559at 564.828 kb on - strand, within B158DRAFT_0559at 564.828 kb on - strand, within B158DRAFT_0559at 564.858 kb on + strand, within B158DRAFT_0559at 564.899 kb on + strand, within B158DRAFT_0559at 564.913 kb on + strand, within B158DRAFT_0559at 564.915 kb on - strand, within B158DRAFT_0559at 564.956 kb on + strand, within B158DRAFT_0559at 565.054 kb on + strand, within B158DRAFT_0559at 565.062 kb on - strand, within B158DRAFT_0559at 565.086 kb on + strand, within B158DRAFT_0559at 565.119 kb on - strand, within B158DRAFT_0559at 565.263 kb on - strandat 565.305 kb on + strandat 565.358 kb on - strandat 565.650 kb on - strandat 565.687 kb on + strand, within B158DRAFT_0560at 565.687 kb on + strand, within B158DRAFT_0560at 565.687 kb on + strand, within B158DRAFT_0560at 565.695 kb on - strand, within B158DRAFT_0560at 565.698 kb on + strand, within B158DRAFT_0560at 565.718 kb on - strand, within B158DRAFT_0560at 565.718 kb on - strand, within B158DRAFT_0560at 566.028 kb on + strand, within B158DRAFT_0560at 566.098 kb on - strand, within B158DRAFT_0560at 566.143 kb on + strand, within B158DRAFT_0560at 566.151 kb on - strand, within B158DRAFT_0560at 566.161 kb on + strand, within B158DRAFT_0560at 566.169 kb on - strand, within B158DRAFT_0560at 566.175 kb on - strand, within B158DRAFT_0560

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.00390625 mg/ml
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562,606 - +0.9
562,608 + +0.2
562,616 - -0.1
562,700 + -0.1
562,816 + -0.5
562,816 + -0.9
562,841 - -1.8
562,858 - B158DRAFT_0558 0.12 -1.2
562,883 + B158DRAFT_0558 0.16 -0.4
562,891 - B158DRAFT_0558 0.18 -0.9
562,891 - B158DRAFT_0558 0.18 -0.9
562,891 - B158DRAFT_0558 0.18 -0.3
562,953 + B158DRAFT_0558 0.29 +0.1
562,958 + B158DRAFT_0558 0.30 -1.1
562,958 + B158DRAFT_0558 0.30 -1.0
562,961 - B158DRAFT_0558 0.30 -0.3
562,961 - B158DRAFT_0558 0.30 -0.8
562,988 + B158DRAFT_0558 0.35 -0.3
562,988 + B158DRAFT_0558 0.35 -0.5
562,996 - B158DRAFT_0558 0.36 -0.7
563,141 - B158DRAFT_0558 0.62 -1.8
563,176 + B158DRAFT_0558 0.68 -1.3
563,183 + B158DRAFT_0558 0.69 -0.4
563,184 - B158DRAFT_0558 0.69 -0.5
563,188 + B158DRAFT_0558 0.70 -0.7
563,188 + B158DRAFT_0558 0.70 -0.2
563,196 - B158DRAFT_0558 0.71 -0.8
563,197 - B158DRAFT_0558 0.72 -2.0
563,198 - B158DRAFT_0558 0.72 -0.7
563,214 + B158DRAFT_0558 0.75 -0.5
563,226 + B158DRAFT_0558 0.77 +0.2
563,258 + B158DRAFT_0558 0.82 -0.4
563,258 + B158DRAFT_0558 0.82 +0.8
563,258 + B158DRAFT_0558 0.82 -0.1
563,266 - B158DRAFT_0558 0.84 -0.3
563,266 - B158DRAFT_0558 0.84 -0.8
563,270 + B158DRAFT_0558 0.84 -0.7
563,270 + B158DRAFT_0558 0.84 -0.6
563,304 + -0.6
563,304 + -0.7
563,311 + -0.8
563,311 + -0.8
563,319 - -0.6
563,319 - +0.0
563,324 - -0.7
563,381 - +0.1
563,441 - -0.3
563,467 + -0.6
563,472 + -1.1
563,475 - -1.1
563,475 - -1.4
563,482 - +0.1
563,487 - -0.8
563,515 + -0.5
563,572 + -1.0
563,645 + B158DRAFT_0559 0.13 -0.4
563,776 + B158DRAFT_0559 0.20 -0.6
563,804 + B158DRAFT_0559 0.21 -0.5
563,812 - B158DRAFT_0559 0.21 -1.4
563,841 - B158DRAFT_0559 0.23 -1.3
563,843 + B158DRAFT_0559 0.23 -0.9
563,843 + B158DRAFT_0559 0.23 -1.0
563,843 + B158DRAFT_0559 0.23 -0.4
563,843 + B158DRAFT_0559 0.23 -1.4
563,851 - B158DRAFT_0559 0.23 -1.0
563,881 - B158DRAFT_0559 0.25 -1.7
563,881 - B158DRAFT_0559 0.25 -0.2
563,910 + B158DRAFT_0559 0.26 -0.6
563,981 + B158DRAFT_0559 0.30 -0.3
563,981 + B158DRAFT_0559 0.30 -0.6
563,981 + B158DRAFT_0559 0.30 -0.7
564,046 - B158DRAFT_0559 0.33 -0.1
564,051 + B158DRAFT_0559 0.33 -0.3
564,051 + B158DRAFT_0559 0.33 -0.1
564,051 + B158DRAFT_0559 0.33 -1.5
564,051 + B158DRAFT_0559 0.33 -1.1
564,051 + B158DRAFT_0559 0.33 -0.9
564,051 + B158DRAFT_0559 0.33 -1.6
564,051 + B158DRAFT_0559 0.33 -2.1
564,051 + B158DRAFT_0559 0.33 -0.7
564,051 + B158DRAFT_0559 0.33 -0.8
564,051 + B158DRAFT_0559 0.33 +0.4
564,051 - B158DRAFT_0559 0.33 -0.1
564,059 - B158DRAFT_0559 0.33 -1.4
564,059 - B158DRAFT_0559 0.33 -0.3
564,059 - B158DRAFT_0559 0.33 +0.0
564,059 - B158DRAFT_0559 0.33 -0.3
564,059 - B158DRAFT_0559 0.33 -0.6
564,059 - B158DRAFT_0559 0.33 +0.2
564,059 - B158DRAFT_0559 0.33 -1.1
564,059 - B158DRAFT_0559 0.33 -0.1
564,229 - B158DRAFT_0559 0.42 +0.2
564,245 - B158DRAFT_0559 0.42 -0.6
564,247 - B158DRAFT_0559 0.43 -0.4
564,279 + B158DRAFT_0559 0.44 -0.3
564,319 - B158DRAFT_0559 0.46 -1.1
564,382 + B158DRAFT_0559 0.49 -0.3
564,404 + B158DRAFT_0559 0.50 -0.8
564,428 - B158DRAFT_0559 0.51 -1.4
564,527 + B158DRAFT_0559 0.56 -0.9
564,527 + B158DRAFT_0559 0.56 -1.0
564,570 + B158DRAFT_0559 0.58 -1.1
564,571 + B158DRAFT_0559 0.58 -0.1
564,585 + B158DRAFT_0559 0.59 -0.6
564,585 + B158DRAFT_0559 0.59 +0.5
564,601 + B158DRAFT_0559 0.60 -0.5
564,601 + B158DRAFT_0559 0.60 -2.2
564,619 - B158DRAFT_0559 0.61 -0.5
564,626 - B158DRAFT_0559 0.61 -0.8
564,679 - B158DRAFT_0559 0.64 +0.3
564,714 - B158DRAFT_0559 0.65 -0.9
564,719 + B158DRAFT_0559 0.65 -0.8
564,754 + B158DRAFT_0559 0.67 -1.1
564,754 + B158DRAFT_0559 0.67 -1.1
564,754 + B158DRAFT_0559 0.67 -0.6
564,762 - B158DRAFT_0559 0.68 -2.0
564,775 + B158DRAFT_0559 0.68 -1.0
564,775 + B158DRAFT_0559 0.68 -0.6
564,775 + B158DRAFT_0559 0.68 +0.3
564,788 - B158DRAFT_0559 0.69 -1.3
564,820 + B158DRAFT_0559 0.70 -0.5
564,828 - B158DRAFT_0559 0.71 -1.5
564,828 - B158DRAFT_0559 0.71 -0.7
564,858 + B158DRAFT_0559 0.72 -1.1
564,899 + B158DRAFT_0559 0.74 -1.7
564,913 + B158DRAFT_0559 0.75 -0.2
564,915 - B158DRAFT_0559 0.75 -0.9
564,956 + B158DRAFT_0559 0.77 +0.4
565,054 + B158DRAFT_0559 0.82 -1.6
565,062 - B158DRAFT_0559 0.82 -0.4
565,086 + B158DRAFT_0559 0.83 -0.6
565,119 - B158DRAFT_0559 0.85 -1.2
565,263 - -0.6
565,305 + -1.2
565,358 - -0.4
565,650 - -0.5
565,687 + B158DRAFT_0560 0.14 -0.3
565,687 + B158DRAFT_0560 0.14 -0.1
565,687 + B158DRAFT_0560 0.14 -0.3
565,695 - B158DRAFT_0560 0.16 -0.1
565,698 + B158DRAFT_0560 0.16 -0.7
565,718 - B158DRAFT_0560 0.19 +0.1
565,718 - B158DRAFT_0560 0.19 +0.7
566,028 + B158DRAFT_0560 0.62 -1.2
566,098 - B158DRAFT_0560 0.72 +0.7
566,143 + B158DRAFT_0560 0.79 +0.7
566,151 - B158DRAFT_0560 0.80 -0.1
566,161 + B158DRAFT_0560 0.81 -0.2
566,169 - B158DRAFT_0560 0.82 +0.5
566,175 - B158DRAFT_0560 0.83 -0.7

Or see this region's nucleotide sequence