Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0531

Experiment: m.b. Thallium(I) acetate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0528 and B158DRAFT_0530 are separated by 346 nucleotidesB158DRAFT_0530 and B158DRAFT_0531 are separated by 26 nucleotidesB158DRAFT_0531 and B158DRAFT_0532 are separated by 197 nucleotidesB158DRAFT_0532 and B158DRAFT_0533 are separated by 42 nucleotides B158DRAFT_0528: B158DRAFT_0528 - 5-formyltetrahydrofolate cyclo-ligase, at 536,510 to 537,142 _0528 B158DRAFT_0530: B158DRAFT_0530 - cell division protein ZapA, at 537,489 to 537,815 _0530 B158DRAFT_0531: B158DRAFT_0531 - hypothetical protein, at 537,842 to 538,039 _0531 B158DRAFT_0532: B158DRAFT_0532 - Uncharacterized protein conserved in bacteria, at 538,237 to 538,788 _0532 B158DRAFT_0533: B158DRAFT_0533 - Xaa-Pro aminopeptidase, at 538,831 to 540,150 _0533 Position (kb) 537 538 539Strain fitness (log2 ratio) -2 -1 0 1at 536.867 kb on - strand, within B158DRAFT_0528at 536.929 kb on + strand, within B158DRAFT_0528at 536.929 kb on + strand, within B158DRAFT_0528at 536.929 kb on + strand, within B158DRAFT_0528at 536.929 kb on + strand, within B158DRAFT_0528at 536.930 kb on + strand, within B158DRAFT_0528at 536.937 kb on - strand, within B158DRAFT_0528at 536.991 kb on - strand, within B158DRAFT_0528at 537.061 kb on + strand, within B158DRAFT_0528at 537.061 kb on + strand, within B158DRAFT_0528at 537.069 kb on + strand, within B158DRAFT_0528at 537.069 kb on + strand, within B158DRAFT_0528at 537.079 kb on + strandat 537.086 kb on + strandat 537.172 kb on + strandat 537.193 kb on + strandat 537.201 kb on + strandat 537.201 kb on - strandat 537.209 kb on - strandat 537.243 kb on + strandat 537.243 kb on + strandat 537.269 kb on - strandat 537.414 kb on - strandat 537.416 kb on + strandat 537.416 kb on + strandat 537.453 kb on - strandat 537.554 kb on + strand, within B158DRAFT_0530at 537.554 kb on + strand, within B158DRAFT_0530at 537.554 kb on + strand, within B158DRAFT_0530at 537.554 kb on + strand, within B158DRAFT_0530at 537.562 kb on - strand, within B158DRAFT_0530at 537.601 kb on + strand, within B158DRAFT_0530at 537.627 kb on + strand, within B158DRAFT_0530at 537.635 kb on - strand, within B158DRAFT_0530at 537.635 kb on - strand, within B158DRAFT_0530at 537.666 kb on - strand, within B158DRAFT_0530at 537.794 kb on - strandat 538.124 kb on - strandat 538.159 kb on + strandat 538.160 kb on + strandat 538.175 kb on - strandat 538.191 kb on + strandat 538.255 kb on + strandat 538.305 kb on - strand, within B158DRAFT_0532at 538.321 kb on - strand, within B158DRAFT_0532at 538.396 kb on - strand, within B158DRAFT_0532at 538.439 kb on + strand, within B158DRAFT_0532at 538.469 kb on - strand, within B158DRAFT_0532at 538.493 kb on - strand, within B158DRAFT_0532at 538.516 kb on - strand, within B158DRAFT_0532at 538.529 kb on - strand, within B158DRAFT_0532at 538.529 kb on - strand, within B158DRAFT_0532at 538.529 kb on - strand, within B158DRAFT_0532at 538.561 kb on + strand, within B158DRAFT_0532at 538.620 kb on - strand, within B158DRAFT_0532at 538.708 kb on - strand, within B158DRAFT_0532at 538.754 kb on + strandat 538.788 kb on + strandat 538.797 kb on - strandat 538.797 kb on - strandat 538.797 kb on - strandat 538.799 kb on + strandat 538.817 kb on + strandat 538.825 kb on - strandat 538.882 kb on + strandat 538.931 kb on + strandat 538.931 kb on + strandat 538.934 kb on - strandat 538.939 kb on - strandat 538.944 kb on - strandat 539.003 kb on - strand, within B158DRAFT_0533at 539.003 kb on - strand, within B158DRAFT_0533at 539.024 kb on + strand, within B158DRAFT_0533

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.00390625 mg/ml
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536,867 - B158DRAFT_0528 0.56 -0.5
536,929 + B158DRAFT_0528 0.66 -0.6
536,929 + B158DRAFT_0528 0.66 -0.0
536,929 + B158DRAFT_0528 0.66 -0.7
536,929 + B158DRAFT_0528 0.66 -0.5
536,930 + B158DRAFT_0528 0.66 -0.3
536,937 - B158DRAFT_0528 0.67 -0.7
536,991 - B158DRAFT_0528 0.76 -1.4
537,061 + B158DRAFT_0528 0.87 -1.2
537,061 + B158DRAFT_0528 0.87 -0.4
537,069 + B158DRAFT_0528 0.88 -0.0
537,069 + B158DRAFT_0528 0.88 -0.3
537,079 + +0.2
537,086 + -0.1
537,172 + +0.1
537,193 + -1.5
537,201 + +0.3
537,201 - -1.1
537,209 - +1.0
537,243 + -0.3
537,243 + -0.3
537,269 - +0.2
537,414 - +0.0
537,416 + -0.0
537,416 + +0.1
537,453 - -0.3
537,554 + B158DRAFT_0530 0.20 +0.6
537,554 + B158DRAFT_0530 0.20 +0.9
537,554 + B158DRAFT_0530 0.20 +1.0
537,554 + B158DRAFT_0530 0.20 +0.6
537,562 - B158DRAFT_0530 0.22 +0.7
537,601 + B158DRAFT_0530 0.34 +0.6
537,627 + B158DRAFT_0530 0.42 +1.2
537,635 - B158DRAFT_0530 0.45 -0.1
537,635 - B158DRAFT_0530 0.45 +0.8
537,666 - B158DRAFT_0530 0.54 +1.0
537,794 - +0.8
538,124 - -0.8
538,159 + -0.3
538,160 + -0.8
538,175 - -0.3
538,191 + +0.1
538,255 + -0.3
538,305 - B158DRAFT_0532 0.12 -0.2
538,321 - B158DRAFT_0532 0.15 -0.1
538,396 - B158DRAFT_0532 0.29 -0.2
538,439 + B158DRAFT_0532 0.37 -0.2
538,469 - B158DRAFT_0532 0.42 -2.0
538,493 - B158DRAFT_0532 0.46 -0.6
538,516 - B158DRAFT_0532 0.51 -0.4
538,529 - B158DRAFT_0532 0.53 +0.0
538,529 - B158DRAFT_0532 0.53 -0.3
538,529 - B158DRAFT_0532 0.53 +0.1
538,561 + B158DRAFT_0532 0.59 -1.0
538,620 - B158DRAFT_0532 0.69 -0.8
538,708 - B158DRAFT_0532 0.85 -0.5
538,754 + -0.3
538,788 + -1.5
538,797 - -0.1
538,797 - +0.1
538,797 - +0.2
538,799 + +0.5
538,817 + +0.3
538,825 - -0.3
538,882 + +0.8
538,931 + +0.8
538,931 + +0.7
538,934 - -0.1
538,939 - +0.0
538,944 - -0.9
539,003 - B158DRAFT_0533 0.13 -0.1
539,003 - B158DRAFT_0533 0.13 -0.4
539,024 + B158DRAFT_0533 0.15 +0.7

Or see this region's nucleotide sequence