Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0510

Experiment: m.b. Thallium(I) acetate 0.00390625 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntB158DRAFT_0509 and B158DRAFT_0510 are separated by 165 nucleotidesB158DRAFT_0510 and B158DRAFT_0511 are separated by 27 nucleotides B158DRAFT_0509: B158DRAFT_0509 - diguanylate cyclase (GGDEF) domain, at 512,863 to 517,413 _0509 B158DRAFT_0510: B158DRAFT_0510 - transketolase, bacterial and yeast, at 517,579 to 519,597 _0510 B158DRAFT_0511: B158DRAFT_0511 - glyceraldehyde-3-phosphate dehydrogenase (NAD+) (EC 1.2.1.12), at 519,625 to 520,626 _0511 Position (kb) 517 518 519 520Strain fitness (log2 ratio) -2 -1 0 1at 516.626 kb on + strand, within B158DRAFT_0509at 516.728 kb on + strand, within B158DRAFT_0509at 516.736 kb on - strand, within B158DRAFT_0509at 516.736 kb on - strand, within B158DRAFT_0509at 516.773 kb on - strand, within B158DRAFT_0509at 516.798 kb on - strand, within B158DRAFT_0509at 516.831 kb on - strand, within B158DRAFT_0509at 516.840 kb on + strand, within B158DRAFT_0509at 516.848 kb on - strand, within B158DRAFT_0509at 516.848 kb on - strand, within B158DRAFT_0509at 516.884 kb on + strand, within B158DRAFT_0509at 516.884 kb on + strand, within B158DRAFT_0509at 516.891 kb on + strand, within B158DRAFT_0509at 516.892 kb on - strand, within B158DRAFT_0509at 516.899 kb on - strand, within B158DRAFT_0509at 516.899 kb on - strand, within B158DRAFT_0509at 516.899 kb on - strand, within B158DRAFT_0509at 516.909 kb on - strand, within B158DRAFT_0509at 516.941 kb on - strand, within B158DRAFT_0509at 517.010 kb on - strandat 517.043 kb on - strandat 517.072 kb on - strandat 517.080 kb on + strandat 517.087 kb on - strandat 517.097 kb on - strandat 517.098 kb on - strandat 517.102 kb on - strandat 517.143 kb on + strandat 517.199 kb on + strandat 517.205 kb on + strandat 517.237 kb on - strandat 517.258 kb on - strandat 517.345 kb on + strandat 517.345 kb on + strandat 517.361 kb on + strandat 517.369 kb on - strandat 517.370 kb on + strandat 517.408 kb on + strandat 517.416 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.00390625 mg/ml
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516,626 + B158DRAFT_0509 0.83 -0.1
516,728 + B158DRAFT_0509 0.85 -0.6
516,736 - B158DRAFT_0509 0.85 -1.1
516,736 - B158DRAFT_0509 0.85 -2.1
516,773 - B158DRAFT_0509 0.86 -1.7
516,798 - B158DRAFT_0509 0.86 -1.3
516,831 - B158DRAFT_0509 0.87 -1.2
516,840 + B158DRAFT_0509 0.87 -1.0
516,848 - B158DRAFT_0509 0.88 -0.6
516,848 - B158DRAFT_0509 0.88 -2.3
516,884 + B158DRAFT_0509 0.88 -0.8
516,884 + B158DRAFT_0509 0.88 -0.2
516,891 + B158DRAFT_0509 0.89 -0.9
516,892 - B158DRAFT_0509 0.89 -0.5
516,899 - B158DRAFT_0509 0.89 -0.9
516,899 - B158DRAFT_0509 0.89 -1.0
516,899 - B158DRAFT_0509 0.89 -1.6
516,909 - B158DRAFT_0509 0.89 +0.5
516,941 - B158DRAFT_0509 0.90 -0.4
517,010 - -0.9
517,043 - -0.5
517,072 - -1.1
517,080 + -0.7
517,087 - -0.6
517,097 - -1.9
517,098 - -0.5
517,102 - -1.4
517,143 + -0.6
517,199 + -1.0
517,205 + -0.7
517,237 - -0.1
517,258 - -0.3
517,345 + -0.9
517,345 + -1.8
517,361 + +0.6
517,369 - -0.4
517,370 + -1.7
517,408 + +0.3
517,416 - +0.1

Or see this region's nucleotide sequence