Strain Fitness in Kangiella aquimarina DSM 16071 around B158DRAFT_0497

Experiment: m.b. Thallium(I) acetate 0.00390625 mg/ml

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

download SVG
500 ntB158DRAFT_0496 and B158DRAFT_0497 are separated by 43 nucleotidesB158DRAFT_0497 and B158DRAFT_0498 are separated by 5 nucleotides B158DRAFT_0496: B158DRAFT_0496 - Uncharacterized conserved protein, at 496,926 to 498,236 _0496 B158DRAFT_0497: B158DRAFT_0497 - Micrococcal nuclease (thermonuclease) homologs, at 498,280 to 498,741 _0497 B158DRAFT_0498: B158DRAFT_0498 - Succinylglutamate desuccinylase, at 498,747 to 499,640 _0498 Position (kb) 498 499Strain fitness (log2 ratio) -1 0 1 2at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.321 kb on + strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.329 kb on - strand, within B158DRAFT_0496at 497.341 kb on - strand, within B158DRAFT_0496at 497.360 kb on - strand, within B158DRAFT_0496at 497.430 kb on + strand, within B158DRAFT_0496at 497.449 kb on - strand, within B158DRAFT_0496at 497.464 kb on - strand, within B158DRAFT_0496at 497.477 kb on - strand, within B158DRAFT_0496at 497.495 kb on + strand, within B158DRAFT_0496at 497.502 kb on - strand, within B158DRAFT_0496at 497.503 kb on - strand, within B158DRAFT_0496at 497.506 kb on + strand, within B158DRAFT_0496at 497.507 kb on + strand, within B158DRAFT_0496at 497.507 kb on + strand, within B158DRAFT_0496at 497.514 kb on + strand, within B158DRAFT_0496at 497.567 kb on - strand, within B158DRAFT_0496at 497.572 kb on + strand, within B158DRAFT_0496at 497.580 kb on - strand, within B158DRAFT_0496at 497.619 kb on + strand, within B158DRAFT_0496at 497.663 kb on + strand, within B158DRAFT_0496at 497.663 kb on + strand, within B158DRAFT_0496at 497.686 kb on - strand, within B158DRAFT_0496at 497.713 kb on + strand, within B158DRAFT_0496at 497.731 kb on + strand, within B158DRAFT_0496at 497.786 kb on + strand, within B158DRAFT_0496at 497.896 kb on - strand, within B158DRAFT_0496at 497.907 kb on + strand, within B158DRAFT_0496at 497.910 kb on - strand, within B158DRAFT_0496at 497.961 kb on + strand, within B158DRAFT_0496at 497.976 kb on - strand, within B158DRAFT_0496at 498.008 kb on + strand, within B158DRAFT_0496at 498.016 kb on - strand, within B158DRAFT_0496at 498.113 kb on + strandat 498.123 kb on + strandat 498.125 kb on - strandat 498.287 kb on + strandat 498.287 kb on + strandat 498.342 kb on + strand, within B158DRAFT_0497at 498.350 kb on - strand, within B158DRAFT_0497at 498.350 kb on - strand, within B158DRAFT_0497at 498.366 kb on - strand, within B158DRAFT_0497at 498.366 kb on - strand, within B158DRAFT_0497at 498.398 kb on - strand, within B158DRAFT_0497at 498.404 kb on + strand, within B158DRAFT_0497at 498.445 kb on - strand, within B158DRAFT_0497at 498.489 kb on + strand, within B158DRAFT_0497at 498.601 kb on + strand, within B158DRAFT_0497at 498.687 kb on + strand, within B158DRAFT_0497at 498.687 kb on + strand, within B158DRAFT_0497at 498.695 kb on - strandat 498.695 kb on - strandat 498.701 kb on + strandat 498.709 kb on - strandat 498.719 kb on + strandat 498.729 kb on - strandat 498.823 kb on + strandat 498.877 kb on - strand, within B158DRAFT_0498at 498.878 kb on - strand, within B158DRAFT_0498at 498.958 kb on + strand, within B158DRAFT_0498at 498.958 kb on + strand, within B158DRAFT_0498at 498.996 kb on + strand, within B158DRAFT_0498at 499.077 kb on - strand, within B158DRAFT_0498at 499.077 kb on - strand, within B158DRAFT_0498at 499.082 kb on - strand, within B158DRAFT_0498at 499.092 kb on - strand, within B158DRAFT_0498at 499.110 kb on - strand, within B158DRAFT_0498at 499.177 kb on + strand, within B158DRAFT_0498at 499.261 kb on - strand, within B158DRAFT_0498at 499.331 kb on + strand, within B158DRAFT_0498at 499.331 kb on + strand, within B158DRAFT_0498at 499.342 kb on + strand, within B158DRAFT_0498at 499.350 kb on + strand, within B158DRAFT_0498at 499.350 kb on - strand, within B158DRAFT_0498at 499.355 kb on - strand, within B158DRAFT_0498at 499.355 kb on - strand, within B158DRAFT_0498at 499.522 kb on - strand, within B158DRAFT_0498at 499.522 kb on - strand, within B158DRAFT_0498at 499.522 kb on - strand, within B158DRAFT_0498at 499.542 kb on + strand, within B158DRAFT_0498at 499.555 kb on + strandat 499.555 kb on + strandat 499.658 kb on + strand

download strain data

Per-strain Table

Position Strand Gene LocusTag Fraction m.b. Thallium(I) acetate 0.00390625 mg/ml
remove
497,321 + B158DRAFT_0496 0.30 +1.1
497,321 + B158DRAFT_0496 0.30 +0.9
497,321 + B158DRAFT_0496 0.30 +1.1
497,321 + B158DRAFT_0496 0.30 +1.3
497,321 + B158DRAFT_0496 0.30 +1.1
497,321 + B158DRAFT_0496 0.30 +0.5
497,321 + B158DRAFT_0496 0.30 +1.5
497,321 + B158DRAFT_0496 0.30 +2.1
497,321 + B158DRAFT_0496 0.30 -0.9
497,321 + B158DRAFT_0496 0.30 +0.6
497,321 + B158DRAFT_0496 0.30 +0.3
497,321 + B158DRAFT_0496 0.30 +0.7
497,321 + B158DRAFT_0496 0.30 +1.9
497,321 + B158DRAFT_0496 0.30 +0.3
497,321 + B158DRAFT_0496 0.30 +0.6
497,321 + B158DRAFT_0496 0.30 +0.8
497,321 + B158DRAFT_0496 0.30 +1.3
497,321 + B158DRAFT_0496 0.30 +0.9
497,321 + B158DRAFT_0496 0.30 +0.3
497,321 + B158DRAFT_0496 0.30 +0.4
497,329 - B158DRAFT_0496 0.31 +0.9
497,329 - B158DRAFT_0496 0.31 +1.4
497,329 - B158DRAFT_0496 0.31 +0.6
497,329 - B158DRAFT_0496 0.31 +1.1
497,329 - B158DRAFT_0496 0.31 +0.8
497,329 - B158DRAFT_0496 0.31 +1.1
497,329 - B158DRAFT_0496 0.31 +1.4
497,329 - B158DRAFT_0496 0.31 +0.6
497,329 - B158DRAFT_0496 0.31 +0.8
497,329 - B158DRAFT_0496 0.31 +0.3
497,329 - B158DRAFT_0496 0.31 +0.0
497,329 - B158DRAFT_0496 0.31 +1.7
497,329 - B158DRAFT_0496 0.31 +1.0
497,329 - B158DRAFT_0496 0.31 +1.5
497,329 - B158DRAFT_0496 0.31 +0.6
497,329 - B158DRAFT_0496 0.31 +0.7
497,329 - B158DRAFT_0496 0.31 +0.2
497,329 - B158DRAFT_0496 0.31 +0.2
497,329 - B158DRAFT_0496 0.31 +0.5
497,329 - B158DRAFT_0496 0.31 +1.0
497,329 - B158DRAFT_0496 0.31 +0.9
497,329 - B158DRAFT_0496 0.31 +0.9
497,329 - B158DRAFT_0496 0.31 +1.0
497,329 - B158DRAFT_0496 0.31 +0.4
497,329 - B158DRAFT_0496 0.31 +1.1
497,341 - B158DRAFT_0496 0.32 +0.9
497,360 - B158DRAFT_0496 0.33 +1.6
497,430 + B158DRAFT_0496 0.38 +1.1
497,449 - B158DRAFT_0496 0.40 +0.5
497,464 - B158DRAFT_0496 0.41 +1.0
497,477 - B158DRAFT_0496 0.42 +0.5
497,495 + B158DRAFT_0496 0.43 +1.0
497,502 - B158DRAFT_0496 0.44 +0.9
497,503 - B158DRAFT_0496 0.44 +0.9
497,506 + B158DRAFT_0496 0.44 +0.6
497,507 + B158DRAFT_0496 0.44 +0.9
497,507 + B158DRAFT_0496 0.44 -0.3
497,514 + B158DRAFT_0496 0.45 +1.1
497,567 - B158DRAFT_0496 0.49 +1.0
497,572 + B158DRAFT_0496 0.49 +1.0
497,580 - B158DRAFT_0496 0.50 +0.5
497,619 + B158DRAFT_0496 0.53 +0.7
497,663 + B158DRAFT_0496 0.56 +0.5
497,663 + B158DRAFT_0496 0.56 +0.8
497,686 - B158DRAFT_0496 0.58 +1.1
497,713 + B158DRAFT_0496 0.60 +1.7
497,731 + B158DRAFT_0496 0.61 +0.8
497,786 + B158DRAFT_0496 0.66 +0.6
497,896 - B158DRAFT_0496 0.74 +0.2
497,907 + B158DRAFT_0496 0.75 +0.3
497,910 - B158DRAFT_0496 0.75 +0.4
497,961 + B158DRAFT_0496 0.79 +2.1
497,976 - B158DRAFT_0496 0.80 +0.1
498,008 + B158DRAFT_0496 0.83 +1.0
498,016 - B158DRAFT_0496 0.83 +1.0
498,113 + +1.1
498,123 + +1.4
498,125 - +0.8
498,287 + +0.0
498,287 + +0.7
498,342 + B158DRAFT_0497 0.13 -0.1
498,350 - B158DRAFT_0497 0.15 -0.1
498,350 - B158DRAFT_0497 0.15 -0.1
498,366 - B158DRAFT_0497 0.19 +0.3
498,366 - B158DRAFT_0497 0.19 +0.2
498,398 - B158DRAFT_0497 0.26 -0.2
498,404 + B158DRAFT_0497 0.27 +0.1
498,445 - B158DRAFT_0497 0.36 +0.0
498,489 + B158DRAFT_0497 0.45 -0.5
498,601 + B158DRAFT_0497 0.69 -0.5
498,687 + B158DRAFT_0497 0.88 -0.7
498,687 + B158DRAFT_0497 0.88 +0.2
498,695 - -1.2
498,695 - -0.1
498,701 + +0.2
498,709 - -0.9
498,719 + -1.1
498,729 - -0.6
498,823 + -0.2
498,877 - B158DRAFT_0498 0.15 +0.1
498,878 - B158DRAFT_0498 0.15 +0.1
498,958 + B158DRAFT_0498 0.24 +0.0
498,958 + B158DRAFT_0498 0.24 -0.1
498,996 + B158DRAFT_0498 0.28 -0.6
499,077 - B158DRAFT_0498 0.37 -0.3
499,077 - B158DRAFT_0498 0.37 -0.3
499,082 - B158DRAFT_0498 0.37 +0.2
499,092 - B158DRAFT_0498 0.39 -0.7
499,110 - B158DRAFT_0498 0.41 +0.0
499,177 + B158DRAFT_0498 0.48 +0.4
499,261 - B158DRAFT_0498 0.57 +0.1
499,331 + B158DRAFT_0498 0.65 +0.2
499,331 + B158DRAFT_0498 0.65 -0.2
499,342 + B158DRAFT_0498 0.67 -0.3
499,350 + B158DRAFT_0498 0.67 -0.0
499,350 - B158DRAFT_0498 0.67 -0.1
499,355 - B158DRAFT_0498 0.68 +0.3
499,355 - B158DRAFT_0498 0.68 +0.2
499,522 - B158DRAFT_0498 0.87 +0.5
499,522 - B158DRAFT_0498 0.87 -0.0
499,522 - B158DRAFT_0498 0.87 +1.4
499,542 + B158DRAFT_0498 0.89 -0.1
499,555 + -0.3
499,555 + -0.2
499,658 + -0.6

Or see this region's nucleotide sequence